Publications of C. Caldana

Paschoal, D.; Costa, J. L.; da Silva, E. M.; da Silva, F. B.; Capelin, D.; Ometto, V.; Aricetti, J. A.; Carvalho, G. G.; Pimpinato, R. F.; de Oliveira, R. F. et al.; Carrera, E.; López-Díaz, I.; Rossi, M. L.; Tornisielo, V.; Caldana, C.; Riano-Pachon, D. M.; Cesarino, I.; Teixeira, P. J. P. L.; Figueira, A.: Infection by Moniliophthora perniciosa reprograms Micro-Tom physiology, establishes a sink and increases secondary cell wall synthesis. Journal of Experimental Botany 73 (11), pp. 3651 - 3670 (2022)

Artins, A.; Caldana, C.: The metabolic homeostaTOR: The balance of holding on or letting grow. Current Opinion in Plant Biology 66, 102196 (2022)

Skirycz, A.; Caldana, C.; Fernie, A. R.: Regulation of Plant Primary Metabolism - How Results From Novel Technologies Are Extending Our Understanding From Classical Targeted Approaches. Critical Reviews in Plant Sciences (2022)

Li, X.; Deng, D.; Cataltepe, G.; Román, Á.; Buckley, C.R.; Monte Bello, C.C.; Skirycz, A.; Caldana, C.; Haydon, M.J.: A reactive oxygen species Ca2+ signalling pathway identified from a chemical screen for modifiers of sugar-activated circadian gene expression. New Phytologist (2022)

Urrea-Castellanos, R.; Caldana, C.; Henriques, R.: Growing at the right time: interconnecting the TOR pathway with photoperiod and circadian regulation. Journal of Experimental Botany (2022)

Calderan-Rodrigues, M.J.; Luzarowski, M.; Monte Bello, C.C.; Minen, R.I.; Zühlke, B. M.; Nikoloski, Z.; Skirycz, A.; Caldana, C.: Proteogenic Dipeptides Are Characterized by Diel Fluctuations and Target of Rapamycin Complex-Signaling Dependency in the Model Plant Arabidopsis thaliana. Frontiers in Plant Science 12, 758933 (2021)

Dantas, L.L.B.; Dourado, M.M.; de Lima, N.O.; Cavaçana, N.; Nishiyama, M.; Souza, G.M.; Carneiro, M.S.; Caldana, C.; Hotta, C.T.: Field microenvironments regulate crop diel transcript and metabolite rhythms. New Phytologist 232 (4), pp. 1738 - 1749 (2021)

Viana, A. J. C.; Matiolli, C. C.; Newman, D. W.; Vieira, J. G. P.; Duarte, G. T.; Martins, M. C. M.; Gilbault, E.; Hotta, C. T.; Caldana, C.; Vincentz, M.: The sugar-responsive circadian clock regulator bZIP63 modulates plant growth. New Phytologist 231 (5), pp. 1875 - 1889 (2021)

Busso-Lopes, A. F.; Carnielli, C. M.; Winck, F. V.; de Sa Patroni, F. M.; Oliveira, A. K.; Granato, D. C.; Pereira E Costa, R. A.; Domingues, R. R.; Pauletti, B. A.; Riano-Pachon, D. M. et al.; Aricetti, J.; Caldana, C.; Graner, E.; Della Coletta, R.; Dryden, K.; Fox, J. W.; Paes Leme, A. F.: A Reductionist Approach Using Primary and Metastatic Cell-Derived Extracellular Vesicles Reveals Hub Proteins Associated with Oral Cancer Prognosis. Molecular and Cellular Proteomics 20, 100118 (2021)

da Silva, V. C. H.; Martins, M. C. M.; Calderan-Rodrigues, M.J.; Artins, A.; Monte Bello, C.C.; Gupta, S.; Sobreira, T. J. P.; Riano-Pachon, D. M.; Mafra, V.; Caldana, C.: Shedding Light on the Dynamic Role of the "Target of Rapamycin" Kinase in the Fast-Growing C-4 Species Setaria viridis, a Suitable Model for Biomass Crops. Frontiers in Plant Science 12, 637508 (2021)

Caldana, C.; Martins, M. C. M.; Mubeen, U.; Urrea-Castellanos, R.: The magic 'hammer' of TOR: the multiple faces of a single pathway in the metabolic regulation of plant growth and development. Journal of Experimental Botany 70 (8), pp. 2217 - 2225 (2019)

Mubeen, U.; Giavalisco, P.; Caldana, C.: TOR inhibition interrupts the metabolic homeostasis by shifting the carbon-nitrogen balance in Chlamydomonas reinhardtii. Plant Signaling & Behavior 14 (11), 1670595, p. 1670595 (2019)

Webb, A. A. R.; Seki, M.; Satake, A.; Caldana, C.: Continuous dynamic adjustment of the plant circadian oscillator. Nature Communications 10 (1), 550 (2019)

Ferreira, D. A.; Martins, M. C. M.; Cheavegatti-Gianotto, A.; Carneiro, M. S.; Amadeu, R. R.; Aricetti, J. A.; Wolf, L. D.; Hoffmann, H. P.; de Abreu, L. G. F.; Caldana, C.: Metabolite Profiles of Sugarcane Culm Reveal the Relationship Among Metabolism and Axillary Bud Outgrowth in Genetically Related Sugarcane Commercial Cultivars. Frontiers in Plant Science 9, 857 (2018)

Jueppner, J.; Mubeen, U.; Leisse, A.; Caldana, C.; Wiszniewski, A.A.G.; Steinhauser, D.; Giavalisco, P.: The target of rapamycin kinase affects biomass accumulation and cell cycle progression by altering carbon/nitrogen balance in synchronized Chlamydomonas reinhardtii cells. The Plant Journal 93 (2), pp. 355 - 376 (2018)

de Vries, R. P.; Riley, R.; Wiebenga, A.; Aguilar-Osorio, G.; Amillis, S.; Uchima, C. A.; Anderluh, G.; Asadollahi, M.; Askin, M.; Barry, K. et al.; Battaglia, E.; Bayram, O.; Benocci, T.; Braus-Stromeyer, S. A.; Caldana, C.; Canovas, D.; Cerqueira, G. C.; Chen, F.; Chen, W.; Choi, C.; Clum, A.; Correa dos Santos, R. A.; de Lima Damasio, A. R.; Diallinas, G.; Emri, T.; Fekete, E.; Flipphi, M.; Freyberg, S.; Gallo, A.; Gournas, C.; Habgood, R.; Hainaut, M.; Laura Harispe, M.; Henrissat, B.; Hilden, K. S.; Hope, R.; Hossain, A.; Karabika, E.; Karaffa, L.; Karanyi, Z.; Krasevec, N.; Kuo, A.; Kusch, H.; LaButti, K.; Lagendijk, E. L.; Lapidus, A.; Levasseur, A.; Lindquist, E.; Lipzen, A.; Logrieco, A. F.; MacCabe, A.; Makela, M. R.; Malavazi, I.; Melin, P.; Meyer, V.; Mielnichuk, N.; Miskei, M.; Molnar, A. P.; Mule, G.; Ngan, C. Y.; Orejas, M.; Orosz, E.; Ouedraogo, J. P.; Overkamp, K. M.; Park, H.-S.; Perrone, G.; Piumi, F.; Punt, P. J.; Ram, A. F. J.; Ramon, A.; Rauscher, S.; Record, E.; Riano-Pachon, D. M.; Robert, V.; Roehrig, J.; Ruller, R.; Salamov, A.; Salih, N. S.; Samson, R. A.; Sandor, E.; Sanguinetti, M.; Schutze, T.; Sepcic, K.; Shelest, E.; Sherlock, G.; Sophianopoulou, V.; Squina, F.; Sun, H.; Susca, A.; Todd, R. B.; Tsang, A.; Unkles, S. E.; van de Wiele, N.; van Rossen-Uffink, D.; de Castro Oliveira, J. V.; Vesth, T. C.; Visser, J.; Yu, J.-H.; Zhou, M.; Andersen, M. R.; Archer, D. B.; Baker, S. E.; Benoit, I.; Brakhage, A. A.; Braus, G. H.; Fischer, R.; Frisvad, J. C.; Goldman, G. H.; Houbraken, J.; Oakley, B.; Pocsi, I.; Scazzocchio, C.; Seiboth, B.; vanKuyk, P. A.; Wortman, J.; Dyer, P. S.; Grigoriev, I. V.: Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus. Genome Biology 18, 28 (2017)

Jueppner, J.; Mubeen, U.; Leisse, A.; Caldana, C.; Brus, H.; Steup, M.; Herrmann, M.; Steinhauser, D.; Giavalisco, P.: Dynamics of lipids and metabolites during the cell cycle of Chlamydomonas reinhardtii. The Plant Journal 92 (2), pp. 331 - 343 (2017)

Mandelli, F.; Couger, M. B.; Paixao, D. A. A.; Machado, C. B.; Carnielli, C. M.; Aricetti, J. A.; Polikarpov, I.; Prade, R.; Caldana, C.; Paes Leme, A. F. et al.; Mercadante, A. Z.; Riano-Pachon, D. M.; Squina, F. M.: Thermal adaptation strategies of the extremophile bacterium Thermus filiformis based on multi-omics analysis. Extremophiles 21 (4), pp. 775 - 788 (2017)

Schaker, P. D. C.; Peters, L. P.; Cataldi, T. R.; Labate, C. A.; Caldana, C.; Monteiro-Vitorello, C. B.: Metabolome Dynamics of Smutted Sugarcane Reveals Mechanisms Involved in Disease Progression and Whip Emission. Frontiers in Plant Science 8, 882 (2017)

Seki, M.; Ohara, T.; Hearn, T. J.; Frank, A.; da Silva, V. C. H.; Caldana, C.; Webb, A. A. R.; Satake, A.: Adjustment of the Arabidopsis circadian oscillator by sugar signalling dictates the regulation of starch metabolism. Scientific Reports 7 (1), 8305 (2017)