Publications of the Group

Journal Article (370)

1.
Journal Article
Baena-González, E.; Lunn, J. E.: SnRK1 and trehalose 6-phosphate – two ancient pathways converge to regulate plant metabolism and growth. Current Opinion in Plant Biology 55, pp. 52 - 59 (2020)
2.
Journal Article
Estévez-Geffriaud, V.; Vicente, R.; Vergara-Díaz, O.; Narváez Reinaldo, J.J.; Trillas, M.I.: Application of Trichoderma asperellum T34 on maize (Zea mays) seeds protects against drought stress. Planta 252 (1), 8 (2020)
3.
Journal Article
Fernie, A. R.; Bachem, C.W.B.; Helariutta, Y.; Neuhaus, H.E.; Prat, S.; Ruan, Y.-L.; Stitt, M.; Sweetlove, L.J.; Tegeder, M.; Wahl, V. et al.; Sonnewald, S.; Sonnewald, U.: Synchronization of developmental, molecular and metabolic aspects of source–sink interactions. Nature Plants 6, pp. 55 - 66 (2020)
4.
Journal Article
Ferrari, C.; Mutwil, M.: Gene expression analysis of Cyanophora paradoxa reveals conserved abiotic stress responses between basal algae and flowering plants. New Phytologist 225 (4), pp. 1562 - 1577 (2020)
5.
Journal Article
Ferrari, C.; Shivhare, D.; Hansen, B. O.; Pasha, A.; Esteban, E.; Provart, N. J.; Kragler, F.; Fernie, A. R.; Tohge, T.; Mutwil, M.: Expression Atlas of Selaginella moellendorffii Provides Insights into the Evolution of Vasculature, Secondary Metabolism, and Roots. The Plant Cell 32, pp. 853 - 870 (2020)
6.
Journal Article
Fichtner, F.; Olas, J. J.; Feil, R.; Watanabe, M.; Krause, U.; Hoefgen, R.; Stitt, M.; Lunn, J. E.: Functional features of TREHALOSE-6-PHOSPHATE SYNTHASE1 - an essential enzyme in Arabidopsis thaliana. The Plant Cell 32 (6), pp. 1949 - 1972 (2020)
7.
Journal Article
Hammel, A.; Sommer, F.; Zimmer, D.; Stitt, M.; Mühlhaus, T.; Schroda, M.: Overexpression of Sedoheptulose-1,7-Bisphosphatase Enhances Photosynthesis in Chlamydomonas reinhardtii and Has No Effect on the Abundance of Other Calvin-Benson Cycle Enzymes. Frontiers in Plant Science 11, 868 (2020)
8.
Journal Article
Lecourieux, D.; Kappel, C.; Claverol, S.; Pieri, P.; Feil, R.; Lunn, J. E.; Bonneu, M.; Wang, L.; Gomès, E.; Delrot, S. et al.; Lecourieux, F.: Proteomic and metabolomic profiling underlines the stage- and time-dependent effects of high temperature on grape berry metabolism. Journal of Integrative Plant Biology 62 (8), pp. 1132 - 1158 (2020)
9.
Journal Article
Li, X.; Sanagi, M.; Lu, Y.; Nomura, Y.; Stolze, S.C.; Yasuda, S.; Saijo, Y.; Schulze, W.X.; Feil, R.; Stitt, M. et al.; Lunn, J. E.; Nakagami, H.; Sato, T.; Yamaguchi, J.: Protein Phosphorylation Dynamics Under Carbon/Nitrogen-Nutrient Stress and Identification of a Cell Death-Related Receptor-Like Kinase in Arabidopsis. Frontiers in Plant Scienc 11, 377 (2020)
10.
Journal Article
Nardozza, S.; Boldingh, H. L.; Kashuba, P.; Feil, R.; Jones, D.; Thrimawithana, A. H.; Ireland, H. S.; Philippe, M.; Wohlers, M. W.; McGhie, T. et al.; Montefiori, M.; Lunn, J. E.; Allan, A.; Richardson, A. C.: Carbon starvation reduces carbohydrate and anthocyanin accumulation in red-fleshed fruit via trehalose 6-phosphate and MYB27. Plant, Cell and Environment 43 (4), pp. 819 - 835 (2020)
11.
Journal Article
Ng, J.W.X.; Tan, Q.W.; Ferrari, C.; Mutwil, M.: Diurnal.plant.tools: Comparative Transcriptomic and Co-expression Analyses of Diurnal Gene Expression of the Archaeplastida Kingdom. Plant and Cell Physiology 61 (1), pp. 212 - 220 (2020)
12.
Journal Article
Obata, T.; Klemens, P.A.W.; Rosado-Souza, L.; Schlereth, A.; Gisel, A.; Stavolone, L.; Zierer, W.; Morales, N.; Mueller, L.A.; Zeeman, S.C. et al.; Ludewig, F.; Stitt, M.; Sonnewald, U.; Neuhaus, H.E.; Fernie, A. R.: Metabolic profiles of six African cultivars of cassava (Manihot esculenta Crantz) highlight bottlenecks of root yield. The Plant Journal 102 (6), pp. 1202 - 1219 (2020)
13.
Journal Article
Olas, J. J.; Fichtner, F.; Apelt, F.: All roads lead to growth: imaging-based and biochemical methods to measure plant growth. Journal of Experimental Botany 71 (1), pp. 11 - 21 (2020)
14.
Journal Article
Sanchez-Bragado, R.; Vicente, R.; Molero, G.; Serret, M.D.; Maydup, M.L.; Araus, J.L.: New avenues for increasing yield and stability in C3 cereals: exploring ear photosynthesis. Current Opinion in Plant Biology 56, pp. 223 - 234 (2020)
15.
Journal Article
Treves, H.; Siemiatkowska, B.; Luzarowska, U.; Murik, O.; Fernandez-Pozo, N.; Moraes, T. A.; Erban, A.; Armbruster, U.; Brotman, Y.; Kopka, J. et al.; Rensing, S. A.; Szymanski, J.; Stitt, M.: Multi-omics reveals mechanisms of total resistance to extrememillumination of a desert alga. Nature Plants 6, pp. 1031 - 1043 (2020)
16.
Journal Article
Vergara-Diaz, O.; Vatter, T.; Vicente, R.; Obata, T.; Nieto-Taladriz, M.T.; Aparicio, N.; Carlisle Kefauver, S.; Fernie, A. R.; Araus, J.L.: Metabolome Profiling Supports the Key Role of the Spike in Wheat Yield Performance. Cells 9 (4), 1025 (2020)
17.
Journal Article
Wang, Y.; Wang, L.; Micallef, B. J.; Tetlow, I. J.; Mullen, R. T.; Feil, R.; Lunn, J. E.; Emes, M. J.: AKINβ1, a regulatory subunit of SnRK1, regulates organic acid metabolism and acts as a global regulator of genes involved in carbon, lipid and nitrogen metabolism. Journal of Experimental Botany 71 (3), pp. 1010 - 1028 (2020)
18.
Journal Article
Zhang, Y.; Sampathkumar, A.; Kerbler, S.M.-L.; Swart, C.; Hille, C.; Seerangan, K.; Graf, A.; Sweetlove, L.; Fernie, A. R.: A moonlighting role for enzymes of glycolysis in the co-localization of mitochondria and chloroplasts. Nature Communications 11 (1), 4509 (2020)
19.
Journal Article
Ceusters, N.; Luca, S.; Feil, R.; Claes, J. E.; Lunn, J. E.; Van den Ende, W.; Ceusters, J.: Hierarchical clustering reveals unique features in the diel dynamics of metabolites in the CAM orchid Phalaenopsis. Journal of Experimental Botany 70 (12), pp. 3269 - 3281 (2019)
20.
Journal Article
Moraes, T. A.; Mengin, V.; Annunziata, M. G.; Encke, B.; Krohn, N.; Höhne, M.; Stitt, M.: Response of the Circadian Clock and Diel Starch Turnover to One Day of Low Light or Low CO2. Plant Physiology 179 (4), pp. 1457 - 1478 (2019)
21.
Journal Article
Arrivault, S.; Moraes, T. A.; Obata, T.; Medeiros, D.B.; Fernie, A. R.; Boulouis, A.; Ludwig, M.; Lunn, J. E.; Borghi, G.L.; Schlereth, A. et al.; Guenther, M.; Stitt, M.: Metabolite profiles reveal interspecific variation in operation of the Calvin–Benson cycle in both C4 and C3 plants. Journal of Experimental Botany 70 (6), pp. 1843 - 1858 (2019)
22.
Journal Article
Amthor, J. S.; Bar-Even, A.; Hanson, A. D.; Millar, A. H.; Stitt, M.; Sweetlove, L. J.; Tyerman, S. D.: Engineering Strategies to Boost Crop Productivity by Cutting Respiratory Carbon Loss. Plant Cell 31 (2), pp. 297 - 314 (2019)
23.
Journal Article
Annunziata, M. G.: Enhancing Wheat Rubisco Activase Thermostability by Mutagenesis of Conserved Residues from Heat-Adapted Species. Plant Physiology 181 (1), p. 3 (2019)
24.
Journal Article
Annunziata, M. G.: NTRC: A Key Regulatory Hub in Carbon Metabolism and Redox Balance in Developing Tomato Fruits. Plant Physiology 181 (3), pp. 851 - 852 (2019)
25.
Journal Article
Annunziata, M. G.; Ciarmiello, L. F.; Woodrow, P.; Dell'Aversana, E.; Carillo, P.: Spatial and Temporal Profile of Glycine Betaine Accumulation in Plants Under Abiotic Stresses. Frontiers in Plant Science 10, 230 (2019)
26.
Journal Article
Belouah, I.; Nazaret, C.; Petriacq, P.; Prigent, S.; Benard, C.; Mengin, V.; Blein-Nicolas, M.; Denton, A. K.; Balliau, T.; Auge, S. et al.; Bouchez, O.; Mazat, J.-P.; Stitt, M.; Usadel, B.; Zivy, M.; Beauvoit, B.; Gibon, Y.; Colombie, S.: Modeling Protein Destiny in Developing Fruit. Plant Physiology 180 (3), pp. 1709 - 1724 (2019)
27.
Journal Article
Ben-Jabeur, M.; Vicente, R.; López-Cristoffanini, C.; Alesami, N.; Djébali, N.; Gracia-Romero, A.; Serret, M. D.; López-Carbonell, M.; Araus, J. L.; Hamada, W.: A Novel Aspect of Essential Oils: Coating Seeds with Thyme Essential Oil induces Drought Resistance in Wheat. Plants 8 (10), 371 (2019)
28.
Journal Article
Borghi, G.L.; Moraes, T. A.; Günther, M.; Feil, R.; Mengin, V.; Lunn, J. E.; Stitt, M.; Arrivault, S.: Relationship between irradiance and levels of Calvin-Benson cycle and other intermediates in the model eudicot Arabidopsis and the model monocot rice. Journal of Experimental Botany 70 (20), pp. 5809 - 5825 (2019)
29.
Journal Article
Caldana, C.; Martins, M. C. M.; Mubeen, U.; Urrea-Castellanos, R.: The magic 'hammer' of TOR: the multiple faces of a single pathway in the metabolic regulation of plant growth and development. Journal of Experimental Botany 70 (8), pp. 2217 - 2225 (2019)
30.
Journal Article
Claeys, H.; Vi, S. L.; Xu, X.; Satoh-Nagasawa, N.; Eveland, A. L.; Goldshmidt, A.; Feil, R.; Beggs, G. A.; Sakai, H.; Brennan, R. G. et al.; Lunn, J. E.; Jackson, D.: Control of meristem determinacy by trehalose 6-phosphate phosphatases is uncoupled from enzymatic activity. Nature Plants 5 (4), pp. 352 - 357 (2019)
31.
Journal Article
de Haro, L. A.; Arellano, S. M.; Novák, O.; Feil, R.; Dumón, A. D.; Mattio, M. F.; Tarkowská, D.; Llauger, G.; Strnad, M.; Lunn, J. E. et al.; Pearce, S.; Figueroa, C. M.; del Vas, M.: Mal de Río Cuarto virus infection causes hormone imbalance and sugar accumulation in wheat leaves. BMC Plant Biology 19 (1), 112 (2019)
32.
Journal Article
Decros, G.; Beauvoit, B.; Colombié, S.; Cabasson, C.; Bernillon, S.; Arrivault, S.; Guenther, M.; Belouha, I.; Prigent, S.; Gibon, Y. et al.; Pétriacq, Y.: Regulation of pyridine nucleotide metabolism during tomato fruit development through transcript and protein profiling. Frontiers in Plant Science 10, 1201 (2019)
33.
Journal Article
Dong, Z.; Xiao, Y.; Govindarajulu, R.; Feil, R.; Siddoway, M. L.; Nielsen, T.; Lunn, J. E.; Hawkins, J.; Whipple, C.; Chuck, G.: The regulatory landscape of a core maize domestication module controlling bud dormancy and growth repression. Nature Communications 10 (1), 3810 (2019)
34.
Journal Article
Ferrari, C.; Proost, S.; Janowski, M.; Becker, J.; Nikoloski, Z.; Bhattacharya, D.; Price, D.; Tohge, T.; Bar-Even, A.; Fernie, A. R. et al.; Stitt, M.; Mutwil, M.: Kingdom-wide comparison reveals the evolution of diurnal gene expression in Archaeplastida. Nature Communications 10, 737 (2019)
35.
Journal Article
Flis, A.; Mengin, V.; Ivakov, A.; Mugford, S.T.; Hubberten, H. M.; Encke, B.; Krohn, N.; Höhne, M.; Feil, R.; Hoefgen, R. et al.; Lunn, J. E.; Millar, A.J.; Smith, A.M.; Sulpice, R.; Stitt, M.: Multiple circadian clock outputs regulate diel turnover of carbon and nitrogen reserves. Plant, Cell and Environment 42 (2), pp. 549 - 573 (2019)
36.
Journal Article
Levey, M.; Timm, S.; Mettler-Altmann, T.; Borghi, G.L.; Koczor, M.; Arrivault, S.; Pm Weber, A.; Bauwe, H.; Gowik, U.; Westhoff, P.: Efficient 2-phosphoglycolate degradation is required to maintain carbon assimilation and allocation in the C4 plant Flaveria bidentis. Journal of Experimental Botany 70 (2), pp. 575 - 587 (2019)
37.
Journal Article
Medeiros, D.B.; Arrivault, S.; Alpers, J.; Fernie, A. R.; Aarabi, F.: Non-aqueous Fractionation (NAF) for Metabolite Analysis in Subcellular Compartments of Arabidopsis Leaf Tissues. Bio-protocol 9 (20), UNSP e3399 (2019)
38.
Journal Article
Meyer, R. C.; Gryczka, C.; Neitsch, C.; Mueller, M.; Braeutigam, A.; Schlereth, A.; Schoen, H.; Weigelt-Fischer, K.; Altmann, T.: Genetic diversity for nitrogen use efficiency in Arabidopsis thaliana. Planta 250 (1), pp. 41 - 57 (2019)
39.
Journal Article
Olas, J. J.; Van Dingenen, J.; Abel, C.; Dzialo, M.; Feil, R.; Krapp, A.; Schlereth, A.; Wahl, V.: Nitrate acts at the Arabidopsis thaliana shoot apical meristem to regulate flowering time. New Phytologist 223 (2), pp. 814 - 827 (2019)
40.
Journal Article
Olas, J. J.; Wahl, V.: Tissue-specific NIA1 and NIA2 expression in Arabidopsis thaliana. Plant Signaling & Behavior 14 (11), 1656035 (2019)
41.
Journal Article
Price, D.C.; Goodenough, U.W.; Roth, R.; Lee, J.-H.; Kariyawasam, T.; Mutwil, M.; Ferrari, C.; Facchinelli, F.; Ball, S.G.; Cenci, U. et al.; Chan, C.X.; Wagner, N.E.; Yoon, H.S.; Weber, A.P.M.; Bhattacharya, D.: Analysis of an improved Cyanophora paradoxa genome assembly. DNA research: an international journal for rapid publication of reports on genes and genomes 26 (4), pp. 287 - 299 (2019)
42.
Journal Article
Rosado-Souza, L.; David, L.C.; Drapal, M.; Fraser, P.D.; Hofmann, J.; Klemens, P.A.W.; Ludewig, F.; Neuhaus, H.E.; Obata, T.; Perez-Fons, L. et al.; Schlereth, A.; Sonnewald, U.; Stitt, M.; Zeeman, S.C.; Zierer, W.; Fernie, A. R.: Cassava Metabolomics and Starch Quality. Current protocols in plant biology 4 (4), e20102 (2019)
43.
Journal Article
Schwacke, R.; Ponce-Soto, G. Y.; Krause, K.; Bolger, A. M.; Arsova, B.; Hallab, A.; Gruden, K.; Stitt, M.; Bolger, M. E.; Usadel, B.: MapMan4: A Refined Protein Classification and Annotation Framework Applicable to Multi-Omics Data Analysis. Molecular Plant 12 (6), pp. 879 - 892 (2019)
44.
Journal Article
Torralbo, F.; Vicente, R.; Morcuende, R.; Gonzalez-Murua, C.; Aranjuelo, I.: C and N metabolism in barley leaves and peduncles modulates responsiveness to changing CO2. Journal of Experimental Botany 70 (2), pp. 599 - 611 (2019)
45.
Journal Article
Vicente, R.; Bolger, A. M.; Martinez-Carrasco, R.; Pérez, P.; Gutiérrez, E.; Usadel, B.; Morcuende, R.: De novo transcriptome analysis of durum wheat flag leaves provides new insights into the regulatory response to elevated CO2 and high temperature. Frontiers in Plant Science 10, 1605 (2019)
46.
Journal Article
Yoshida, T.; Obata, T.; Feil, R.; Lunn, J. E.; Fujita, Y.; Yamaguchi-Shinozaki, K.; Fernie, A. R.: The Role of Abscisic Acid Signaling in Maintaining the Metabolic Balance Required for Arabidopsis Growth under Nonstress Conditions. The Plant Cell 31 (1), pp. 84 - 105 (2019)
47.
Journal Article
dos Anjos, L.; Pandey, P. K.; Moraes, T. A.; Feil, R.; Lunn, J. E.; Stitt, M.: Feedback regulation by trehalose 6-phosphate slows down starch mobilization below the rate that would exhaust starch reserves at dawn in Arabidopsis leaves. Plant Direct 2 (8), e00078 (2018)
48.
Journal Article
Janowski, M.; Zoschke, R.; Scharff, L. B.; Martinez-Jaime, S.; Ferrari, C.; Proost, S.; Ng Wei Xiong, J.; Omranian, N.; Musialak-Lange, M.; Nikoloski, Z. et al.; Graf, A.; Schöttler, M. A.; Sampathkumar, A.; Vaid, N.; Mutwil, M.: AtRsgA from Arabidopsis thaliana is important for maturation of the small subunit of the chloroplast ribosome. The Plant Journal 96 (2), pp. 404 - 420 (2018)
49.
Journal Article
Alhajturki, D.; Muralidharan, S.; Nurmi, M.; Rowan, B. A.; Lunn, J. E.; Boldt, H.; Salem, M.A.; Alseekh, S.; Jorzig, C.; Feil, R. et al.; Giavalisco, P.; Fernie, A. R.; Weigel, D.; Laitinen, R.: Dose-dependent interactions between two loci trigger altered shoot growth in BG-5 × Krotzenburg-0 (Kro-0) hybrids of Arabidopsis thaliana. New Phytologist 217 (1), pp. 392 - 406 (2018)
50.
Journal Article
Andersson, M.; Turesson, H.; Arrivault, S.; Zhang, Y.; Fält, A.-S.; Fernie, A. R.; Hofvander, P.: Inhibition of plastid PPase and NTT leads to major changes in starch and tuber formation in potato. Journal of Experimental Botany 69 (8), pp. 1913 - 1924 (2018)
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