Publications of the Group

Journal Article (409)

1.
Journal Article
Fünfgeld, M. F.F.; Wang, W.; Ishihara, H.; Arrivault, S.; Feil, R.; Smith, A. M.; Stitt, M.; Lunn, J. E.; Niittylä, T.: Sucrose synthases are not involved in starch synthesis in Arabidopsis leaves. Nature Plants (2022)
2.
Journal Article
Ishihara, H.; Alseekh, S.; Feil, R.; Perera, P.; George, G. M.; Niedzwiecki, P.; Arrivault, S.; Zeeman, S. C.; Fernie, A. R.; Lunn, J. E. et al.; Smith, A. M.; Stitt, M.: Rising rates of starch degradation during daytime and trehalose 6-phosphate optimize carbon availability. Plant Physiology, kiac162 (2022)
3.
Journal Article
Borghi, M.; Arrivault, S.; Günther, M.; Medeiros, D.B.; Dell'Aversana, E.; Fusco, G.; Carillo, P.; Ludwig, M.; Fernie, A. R.; Lunn, J. E. et al.; Stitt, M.: Metabolic profiles in C-3, C-3-C-4 intermediate, C-4-like, and C-4 species in the genus Flaveria. Journal of Experimental Botany 73 (5), pp. 1581 - 1601 (2022)
4.
Journal Article
Fichtner, F.; Barbier, F.; Kerr, S.; Dudley, C.; Cubas, P.; Turnbull, C.; Brewer, P.; Beveridge, C.: Plasticity of bud outgrowth varies at cauline and rosette nodes in Arabidopsis thaliana. Plant Physiology 188 (3), pp. 1586 - 1603 (2022)
5.
Journal Article
Ribeiro, C.; Stitt, M.; Hotta, C.: How Stress Affects Your Budget-Stress Impacts on Starch Metabolism. Frontiers in Plant Science 13, 774060 (2022)
6.
Journal Article
Apelt, F.; Mavrothalassiti, E.; Gupta, S.; Machin, F.; Olas, J. J.; Annunziata, M. G.; Schindelasch, D.; Kragler, F.: Shoot and root single cell sequencing reveals tissue- and daytime-specific transcriptome profiles. Plant Physiology 188 (2), pp. 861 - 878 (2022)
7.
Journal Article
Klein, H.; Gallagher, J.; Demesa-Arevalo, E.; Abraham-Juárez, M. J.; Heeney, M.; Feil, R.; Lunn, J. E.; Xiao, Y.; Chuck, G.; Whipple, C. et al.; Jackson, D.; Bartlett, M.: Recruitment of an ancient branching program to suppress carpel development in maize flowers. Proceedings of the National Academy of Sciences of the United States of America 119 (2), e2115871119 (2022)
8.
Journal Article
Saint-Sorny, M.; Brzezowski, P.; Arrivault, S.; Alric, J.; Johnson, X.: Interactions Between Carbon Metabolism and Photosynthetic Electron Transport in a Chlamydomonas reinhardtii Mutant Without CO2 Fixation by RuBisCO. Frontiers in Plant Science 13, 876439 (2022)
9.
Journal Article
Treves, H.; Küken, A.; Arrivault, S.; Ishihara, H.; Hoppe, I.; Erban, A.; Höhne, M.; Moraes, T. A.; Kopka, J.; Szymanski, J. et al.; Nikoloski, Z.; Stitt, M.: Carbon flux through photosynthesis and central carbon metabolism show distinct patterns between algae, C-3 and C-4 plants. Nature Plants 8, pp. 78 - 91 (2021)
10.
Journal Article
David, Z.; Swart, C.; Graf, A.; Arrivault, S.; Tillich, M.; Proost, S.; Nikoloski, Z.; Stitt, M.; Bock, R.; Mühlhaus, M. et al.; Boulouis, A.: Topology of the redox network during induction of photosynthesis as revealed by time-resolved proteomics in tobacco. Science Advances 7 (51), eabi8307 (2021)
11.
Journal Article
Verbančič, J.; Huang, J.J.; McFarlane, H.E.: Analysis of cellulose synthase activity in Arabidopsis using spinning disk microscopy. STAR Protocols 2 (4), 100863 (2021)
12.
Journal Article
Gabriel, C.; Fernhout, J.-J.; Fichtner, F.; Feil, R.; Lunn, J. E.; Kossmann, J.; Lloyd, J. R.; van der Vyver, C.: Genetic manipulation of trehalose-6-phosphate synthase results in changes in the soluble sugar profile in transgenic sugarcane stems. Plant Direct 5 (11), e358 (2021)
13.
Journal Article
Muralidhara, P.; Weiste, C.; Collani, S.; Krischke, M.; Kreisz, P.; Draken, J.; Feil, R.; Mair, A.; Teige, M.; Müller, M. J. et al.; Schmid, M.; Becker, D.; Lunn, J. E.; Rolland, F.; Hanson, J.; Dröge-Laser, W.: Perturbations in plant energy homeostasis prime lateral root initiation via SnRK1-bZIP63-ARF19 signaling. Proceedings of the National Academy of Sciences of the United States of America 118 (37), e2106961118 (2021)
14.
Journal Article
Olas, J. J.; Apelt, F.; Annunziata, M. G.; John, S.; Richard, S. I.; Gupta, S.; Kragler, F.; Balazadeh, S.; Mueller-Roeber, B.: Primary carbohydrate metabolism genes participate in heat stress memory at the shoot apical meristem of Arabidopsis thaliana. Molecular Plant 14, pp. 1508 - 1524 (2021)
15.
Journal Article
Hancock, R. D.; Smirnoff, N.; Lunn, J. E.: Journal of Experimental Botany 70th anniversary: plant metabolism in a changing world. Journal of Experimental Botany 72 (17), pp. 5939 - 5941 (2021)
16.
Journal Article
Stitt, M.; Borghi, G.L.; Arrivault, S.: Targeted Metabolite Profiling as a Top-Down Approach to Uncover Inter-Species Diversity and Identify Key Conserved Operational Features in the Calvin-Benson cycle. Journal of Experimental Botany 72 (17), pp. 5961 - 5986 (2021)
17.
Journal Article
Peixoto, B.; Moraes, T. A.; Mengin, V.; Margalha, L.; Vicente, R.; Feil, R.; Höhne, M.; Sousa, A. G. G.; Lilue, J.; Stitt, M. et al.; Lunn, J. E.; Baena-González, E.: Impact of the SnRK1 protein kinase on sucrose homeostasis and the transcriptome during the diel cycle. Plant Physiology 187 (3), pp. 1357 - 1373 (2021)
18.
Journal Article
Moreno, J.C.; Rojas, B.E.; Vicente, R.; Gorka, M.; Matz, T.; Kosmacz, M.; Peralta-Ariza, J.S.; Zhang, Y.; Alseekh, S.; Childs, D. et al.; Luzarowski, M.; Nikoloski, Z.; Zarivach, R.; Walther, D.; Hartman, M.D.; Figueroa, C.M.; Iglesias, A.A.; Fernie, A. R.; Skirycz, A.: Tyr-Asp inhibition of glyceraldehyde 3-phosphate dehydrogenase affects plant redox metabolism. EMBO Journal, e106800 (2021)
19.
Journal Article
Ishihara, H.; Moraes, T. A.; Arrivault, S.; Stitt, M.: Assessing Protein Synthesis and Degradation Rates in Arabidopsis thaliana Using Amino Acid Analysis. Current Protocols 1 (5), e114 (2021)
20.
Journal Article
Zhang, Y.; Giese, J.; Kerbler, S.M.-L.; Siemiatkowska, B.; de Souza, L. P.; Alpers, J.; Medeiros, D.B.; Hincha, D. K.; Daloso, D. M.; Stitt, M. et al.; Finkemeier, I.; Fernie, A. R.: Two mitochondrial phosphatases, PP2c63 and Sal2, are required for posttranslational regulation of the TCA cycle in Arabidopsis. Molecular Plant 14 (7), pp. 1104 - 1118 (2021)
21.
Journal Article
Fichtner, F.; Lunn, J. E.: The Role of Trehalose 6-Phosphate (Tre6P) in Plant Metabolism and Development. Annual Review of Plant Biology 72, pp. 737 - 760 (2021)
22.
Journal Article
Avidan, O.; Malitsky, S.; Pick, U.: Fatty Acid Production and Direct Acyl Transfer through Polar Lipids Control TAG Biosynthesis during Nitrogen Deprivation in the Halotolerant Alga Dunaliella tertiolecta. Marine Drugs 19 (7), 368 (2021)
23.
Journal Article
Caroca, R.; Howell, K. A.; Malinova, I.; Burgos, A.; Tiller, N.; Pellizzer, T.; Annunziata, M. G.; Hasse, C.; Ruf, S.; Karcher, D. et al.; Bock, R.: Knock-down of the plastid-encoded acetyl-CoA carboxylase gene uncovers functions in metabolism and development. Plant Physiology 185 (3), pp. 1091 - 1110 (2021)
24.
Journal Article
Fichtner, F.; Barbier, F. F.; Annunziata, M. G.; Feil, R.; Olas, J. J.; Mueller-Roeber, B.; Stitt, M.; Beveridge, C. A.; Lunn, J. E.: Regulation of shoot branching in Arabidopsis by trehalose 6-phosphate. New Phytologist 229 (4), pp. 2135 - 2151 (2021)
25.
Journal Article
Julca, I.; Ferrari, C.; Flores-Tornero, M.; Proost, S.; Lindner, A.-C.; Hackenberg, D.; Steinbachová, L.; Michaelidis, C.; Gomes Pereira, S.; Misra, C. S. et al.; Kawashima, T.; Borg, M.; Berger, F.; Goldberg, J.; Johnson, M.; Honys, D.; Twell, D.; Sprunck, S.; Dresselhaus, T.; Becker, J. D.; Mutwil, M.: Comparative transcriptomic analysis reveals conserved programmes underpinning organogenesis and reproduction in land plants. Nature Plants 7, pp. 1143 - 1159 (2021)
26.
Journal Article
Krahmer, J.; Abbas, A.; Mengin, V.; Ishihara, H.; Romanowski, A.; Furniss, J. J.; Moraes, T. A.; Krohn, N.; Annunziata, M. G.; Feil, R. et al.; Alseekh, S.; Obata, T.; Fernie, A. R.; Stitt, M.; Halliday, K. J.: Phytochromes control metabolic flux, and their action at the seedling stage determines adult plant biomass. Journal of Experimental Botany 72 (8), pp. 3263 - 3278 (2021)
27.
Journal Article
Luzarowski, M.; Vicente, R.; Kiselev, A.; Wagner, M.; Schlossarek, D.; Erban, A.; de Souza, L. P.; Childs, D.; Wojciechowska, I.; Luzarowska, U. et al.; Gorka, M.; Sokolowska, E.; Kosmacz, M.; Moreno, J.C.; Brzezinska, A.; Vegesna, B.; Kopka, J.; Fernie, A. R.; Willmitzer, L.; Ewald, J. C.; Skirycz, A.: Global mapping of protein–metabolite interactions in Saccharomyces cerevisiae reveals that Ser-Leu dipeptide regulates phosphoglycerate kinase activity. Communications Biology 4 (1), 181 (2021)
28.
Journal Article
McFarlane, H. E.; Mutwil-Anderwald, D.; Verbančič, J.; Picard, K.L.; Gookin, T.E.; Fröhlich, A.; Chakravorty, D.; Trindade, L.M.; Alonso, J.M.; Assmann, S.M. et al.; Persson, S.: A G protein-coupled receptor-like module regulates cellulose synthase secretion from the endomembrane system in Arabidopsis. Developmental Cell 56 (10), pp. 1484 - 1497.e7 (2021)
29.
Journal Article
Meitzel, T.; Radchuk, R.; McAdam, E.L.; Thormählen, I.; Feil, R.; Munz, E.; Hilo, A.; Geigenberger, P.; Ross, J.J.; Lunn, J. E. et al.; Borisjuk, L.: Trehalose 6-phosphate promotes seed filling by activating auxin biosynthesis. New Phytologist 229 (3), pp. 1553 - 1565 (2021)
30.
Journal Article
Olas, J. J.; Apelt, F.; Watanabe, M.; Hoefgen, R.; Wahl, V.: Developmental stage-specific metabolite signatures in Arabidopsis thaliana under optimal and mild nitrogen limitation. Plant Science 303, 110746 (2021)
31.
Journal Article
Paterlini, A.; Dorussen, D.; Fichtner, F.; van Rongen, M.; Delacruz, R.; Vojnović, A.; Helariutta, Y.; Leyser, O.: Callose accumulation in specific phloem cell types reduces axillary bud growth in Arabidopsis thaliana. New Phytologist 231 (2), pp. 516 - 523 (2021)
32.
Journal Article
Pérez-Díaz, J.; Batista-Silva, W.; Almada, R.; Medeiros, D. B.; Arrivault, S.; Correa, F.; Bastías, A.; Rojas, P.; Beltrán, M. F.; Pozo, M. F. et al.; Araújo, W. L.; Sagredo, B.: Prunus Hexokinase 3 genes alter primary C-metabolism and promote drought and salt stress tolerance in Arabidopsis transgenic plants. Scientific Reports 11, 7098 (2021)
33.
Journal Article
Zhai, Z.; Keereetaweep, J.; Liu, H.; Feil, R.; Lunn, J. E.; Shanklin, J.: Expression of a Bacterial Trehalose-6-phosphate Synthase otsA Increases Oil Accumulation in Plant Seeds and Vegetative Tissues. Frontiers in Plant Science 12, 656962 (2021)
34.
Journal Article
Pignocchi, C.; Ivakov, A.; Feil, R.; Trick, M.; Pike, M.; Wang, T. L.; Lunn, J. E.; Smith, A. M.: Restriction of cytosolic sucrose hydrolysis profoundly alters development, metabolism and gene expression in Arabidopsis roots. Journal of Experimental Botany 72 (5), pp. 1850 - 1863 (2020)
35.
Journal Article
Davies, B.; Roberts, J.; Raines, C.; Lunn, J. E.: Retirement of Mary Traynor, executive editor of JXB (1995–2020). Journal of Experimental Botany 71 (19), pp. 5719 - 5720 (2020)
36.
Journal Article
Baena-González, E.; Lunn, J. E.: SnRK1 and trehalose 6-phosphate – two ancient pathways converge to regulate plant metabolism and growth. Current Opinion in Plant Biology 55, pp. 52 - 59 (2020)
37.
Journal Article
Ermakova, M.; Arrivault, S.; Giuliani, R.; Danila, F.; Alonso-Cantabrana, H.; Vlad, D.; Ishihara, H.; Feil, R.; Guenther, M.; Borghi, G.L. et al.; Covshoff, S.; Ludwig, M.; Cousins, A.B.; Langdale, J.A.; Kelly, S.; Lunn, J. E.; Stitt, M.; von Caemmerer, S.; Furbank, R.T.: Installation of C4 photosynthetic pathway enzymes in rice using a single construct. Plant Biotechnology Journal 19 (3), pp. 575 - 588 (2020)
38.
Journal Article
Estévez-Geffriaud, V.; Vicente, R.; Vergara-Díaz, O.; Narváez Reinaldo, J.J.; Trillas, M.I.: Application of Trichoderma asperellum T34 on maize (Zea mays) seeds protects against drought stress. Planta 252 (1), 8 (2020)
39.
Journal Article
Fernie, A. R.; Bachem, C.W.B.; Helariutta, Y.; Neuhaus, H.E.; Prat, S.; Ruan, Y.-L.; Stitt, M.; Sweetlove, L.J.; Tegeder, M.; Wahl, V. et al.; Sonnewald, S.; Sonnewald, U.: Synchronization of developmental, molecular and metabolic aspects of source–sink interactions. Nature Plants 6, pp. 55 - 66 (2020)
40.
Journal Article
Ferrari, C.; Shivhare, D.; Hansen, B. O.; Pasha, A.; Esteban, E.; Provart, N. J.; Kragler, F.; Fernie, A. R.; Tohge, T.; Mutwil, M.: Expression Atlas of Selaginella moellendorffii Provides Insights into the Evolution of Vasculature, Secondary Metabolism, and Roots. The Plant Cell 32 (4), pp. 853 - 870 (2020)
41.
Journal Article
Ferrari, C.; Mutwil, M.: Gene expression analysis of Cyanophora paradoxa reveals conserved abiotic stress responses between basal algae and flowering plants. New Phytologist 225 (4), pp. 1562 - 1577 (2020)
42.
Journal Article
Fichtner, F.; Olas, J. J.; Feil, R.; Watanabe, M.; Krause, U.; Hoefgen, R.; Stitt, M.; Lunn, J. E.: Functional features of TREHALOSE-6-PHOSPHATE SYNTHASE1 - an essential enzyme in Arabidopsis thaliana. The Plant Cell 32 (6), pp. 1949 - 1972 (2020)
43.
Journal Article
Hammel, A.; Sommer, F.; Zimmer, D.; Stitt, M.; Mühlhaus, T.; Schroda, M.: Overexpression of Sedoheptulose-1,7-Bisphosphatase Enhances Photosynthesis in Chlamydomonas reinhardtii and Has No Effect on the Abundance of Other Calvin-Benson Cycle Enzymes. Frontiers in Plant Science 11, 868 (2020)
44.
Journal Article
Lecourieux, D.; Kappel, C.; Claverol, S.; Pieri, P.; Feil, R.; Lunn, J. E.; Bonneu, M.; Wang, L.; Gomès, E.; Delrot, S. et al.; Lecourieux, F.: Proteomic and metabolomic profiling underlines the stage- and time-dependent effects of high temperature on grape berry metabolism. Journal of Integrative Plant Biology 62 (8), pp. 1132 - 1158 (2020)
45.
Journal Article
Lin, H.; Arrivault, S.; Coe, R. A.; Karki, S.; Covshoff, S.; Bagunu, E.; Lunn, J. E.; Stitt, M.; Furbank, R. T.; Hibberd, J. M. et al.; Quick, W. P.: A Partial C4 Photosynthetic Biochemical Pathway in Rice. Frontiers in Plant Science 11, 564463 (2020)
46.
Journal Article
Li, X.; Sanagi, M.; Lu, Y.; Nomura, Y.; Stolze, S.C.; Yasuda, S.; Saijo, Y.; Schulze, W.X.; Feil, R.; Stitt, M. et al.; Lunn, J. E.; Nakagami, H.; Sato, T.; Yamaguchi, J.: Protein Phosphorylation Dynamics Under Carbon/Nitrogen-Nutrient Stress and Identification of a Cell Death-Related Receptor-Like Kinase in Arabidopsis. Frontiers in Plant Scienc 11, 377 (2020)
47.
Journal Article
Moreno Curtidor, C.; Annunziata, M. G.; Gupta, S.; Apelt, F.; Richard, S. I.; Kragler, F.; Mueller-Roeber, B.; Olas, J. J.: Physiological Profiling of Embryos and Dormant Seeds in Two Arabidopsis Accessions Reveals a Metabolic Switch in Carbon Reserve Accumulation. Frontiers in Plant Science 11, 588433 (2020)
48.
Journal Article
Nardozza, S.; Boldingh, H. L.; Kashuba, P.; Feil, R.; Jones, D.; Thrimawithana, A. H.; Ireland, H. S.; Philippe, M.; Wohlers, M. W.; McGhie, T. et al.; Montefiori, M.; Lunn, J. E.; Allan, A.; Richardson, A. C.: Carbon starvation reduces carbohydrate and anthocyanin accumulation in red-fleshed fruit via trehalose 6-phosphate and MYB27. Plant, Cell and Environment 43 (4), pp. 819 - 835 (2020)
49.
Journal Article
Ng, J.W.X.; Tan, Q.W.; Ferrari, C.; Mutwil, M.: Diurnal.plant.tools: Comparative Transcriptomic and Co-expression Analyses of Diurnal Gene Expression of the Archaeplastida Kingdom. Plant and Cell Physiology 61 (1), pp. 212 - 220 (2020)
50.
Journal Article
Obata, T.; Klemens, P.A.W.; Rosado-Souza, L.; Schlereth, A.; Gisel, A.; Stavolone, L.; Zierer, W.; Morales, N.; Mueller, L.A.; Zeeman, S.C. et al.; Ludewig, F.; Stitt, M.; Sonnewald, U.; Neuhaus, H.E.; Fernie, A. R.: Metabolic profiles of six African cultivars of cassava (Manihot esculenta Crantz) highlight bottlenecks of root yield. The Plant Journal 102 (6), pp. 1202 - 1219 (2020)
Go to Editor View