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Tohge, T., Wendenburg, R., Ishihara, H., Nakabayashi, R., Watanabe, M., Sulpice, R., Hoefgen, R., Takayama, H., Saito, K., Stitt, M. & Fernie, A. R. Characterization of a recently evolved flavonol-phenylacyltransferase gene provides signatures of natural light selection in Brassicaceae. Nature Communications 7, (2016).

Vicente, R., Pérez, P., Martínez-Carrasco, R., Feil, R., Lunn, J. E., Watanabe, M., Arrivault, S., Stitt, M., Hoefgen, R. & Morcuende, R. Metabolic and Transcriptional Analysis of Durum Wheat Responses to Elevated CO2 at Low and High Nitrate Supply. Plant Cell Physiology 57, 2133–2146 (2016).

Bielecka, M., Watanabe, M., Morcuende, R., Scheible, W.-R., Hawkesford, M. J., Hesse, H. & Hoefgen, R. Transcriptome and metabolome analysis of plant sulphate starvation and resupply provides novel information on transcriptional regulation of metabolism associated with sulphur, nitrogen and phosphorus nutritional responses in Arabidopsis. Frontiers in Plant Science 5, (2015).

Bromke, M. A. & Hesse, H. Phylogenetic analysis of methionine synthesis genes from Thalassiosira pseudonana. SpringerPlus 4, (2015).

Hubberten, H. M., Sieh, D., Zoeller, D., Hoefgen, R. & Krajinski, F. Medicago truncatula Mtha1-2 mutants loose metabolic responses to mycorrhizal colonization. Plant Signaling & Behavior 10, (2015).

Speiser, A., Haberland, S., Watanabe, M., Wirtz, M., Dietz, K.-J., Saito, K. & Hell, R. The significance of cysteine synthesis for acclimation to high light conditions. Frontiers in Plant Science 5, (2015).

Zuchi, S., Watanabe, M., Hubberten, H. M., Bromke, M. A., Osorio, S., Fernie, A. R., Celletti, S., Paolacci, A. R., Catarcione, G., Ciaffi, M., Hoefgen, R. & Astolfi, S. The Interplay between Sulfur and Iron Nutrition in Tomato. Plant Physiology 169, 2624–2639 (2015).

Weits, D. A., Giuntoli, B., Kosmacz, M., Parlanti, S., Hubberten, H. M., Riegler, H., Hoefgen, R., Perata, P., van Dongen, J. T. & Licausi, F. Plant cysteine oxidases control the oxygen-dependent branch of the N-end-rule pathway. Nature Communications 5, (2014).

Schmidt, R., Schippers, J. H. M., Mieulet, D., Watanabe, M., Hoefgen, R., Guiderdoni, E. & Mueller-Roeber, B. SALT-RESPONSIVE ERF1 Is a Negative Regulator of Grain Filling and Gibberellin-Mediated Seedling Establishment in Rice. Molecular Plant 7, 404–421 (2014).

Tomanov, K., Zeschmann, A., Hermkes, R., Eifler, K., Ziba, I., Grieco, M., Novatchkova, M., Hofmann, K., Hesse, H. & Bachmair, A. Arabidopsis PIAL1 and 2 Promote SUMO Chain Formation as E4-Type SUMO Ligases and Are Involved in Stress Responses and Sulfur Metabolism. Plant Cell 26, 4547–4560 (2014).

Weissgerber, T., Watanabe, M., Hoefgen, R. & Dahl, C. Metabolomic profiling of the purple sulfur bacterium Allochromatium vinosum during growth on different reduced sulfur compounds and malate. Metabolomics 10, 1094–1112 (2014).

Wulff-Zottele, C., Hesse, H., Fisahn, J., Bromke, M. A., Vera-Villalobos, H., Li, Y., Frenzel, F., Giavalisco, P., Ribera-Fonseca, A., Zunino, L., Caruso, I., Stohmann, E. & de la Luz Mora, M. Sulphate fertilization ameliorates long-term aluminum toxicity symptoms in perennial ryegrass (Lolium perenne). Plant Physiology and Biochemistry 83, 88–99 (2014).

Yadav, U. P., Ivakov, A., Feil, R., Duan, G. Y., Walther, D., Giavalisco, P., Piques, M., Carillo , P., Hubberten, H. M., Stitt, M. & Lunn, J. E. The sucrose–trehalose 6-phosphate (Tre6P) nexus: specificity and mechanisms of sucrose signalling by Tre6P. Journal of Experimental Botany 65, 1051–1068 (2014).

Schmidt, R., Mieulet, D., Hubberten, H. M., Obata, T., Hoefgen, R., Fernie, A. R., Fisahn, J., Segundo, B. S., Guiderdoni, E., Schippers, J. H. M. & Mueller-Roeber, B. SALT-RESPONSIVE ERF1 Regulates Reactive Oxygen Species-Dependent Signaling during the Initial Response to Salt Stress in Rice. The Plant Cell 25, 2115–2131 (2013).

Bromke, M. A., Giavalisco, P., Willmitzer, L. & Hesse, H. Metabolic Analysis of Adaptation to Short-Term Changes in Culture Conditions of the Marine Diatom Thalassiosira pseudonana. PLoS One 8, e67340 (2013).

Bromke, M. A., Hoefgen, R. & Hesse, H. Phylogenetic aspects of the sulfate assimilation genes from Thalassiosira pseudonana. Amino Acids 44, 1253–1265 (2013).

Sieh, D., Watanabe, M., Devers, E. A., Brueckner, F., Hoefgen, R. & Krajinski, F. The arbuscular mycorrhizal symbiosis influences sulfur starvation responses of Medicago truncatula. New Phytologist 197, 606–616 (2013).

Tahir, J., Watanabe, M., Jing, H. C., Hunter, D. A., Tohge, T., Nunes-Nesi, A., Brotman, Y., Fernie, A. R., Hoefgen, R. & Dijkwel, P. P. Activation of R-mediated innate immunity and disease susceptibility is affected by mutations in a cytosolic O-acetylserine (thiol) lyase in Arabidopsis. The Plant Journal 73, 118–130 (2013).

Tohge, T., Watanabe, M., Hoefgen, R. & Fernie, A. R. Shikimate and phenylalanine biosynthesis in the green lineage. Frontiers in Plant Science 4, 62 (2013).