Publications of H. Ishihara

Journal Article (19)

Journal Article
Medeiros, D. B., Ishihara, H., Guenther, M., Rosado-Souza, L., Fernie, A. R., Stitt, M. & Arrivault, S. 13CO2 Labelling Kinetics in Maize Reveal Impaired Efficiency of C4 Photosynthesis under Low Irradiance. Plant Physiology 190, 280–304 (2022).
Journal Article
Ishihara, H., Alseekh, S., Feil, R., Perera, P., George, G. M., Niedzwiecki, P., Arrivault, S., Zeeman, S. C., Fernie, A. R., Lunn, J. E., Smith, A. M. & Stitt, M. Rising rates of starch degradation during daytime and trehalose 6-phosphate optimize carbon availability. Plant Physiology 189, 1976–2000 (2022).
Journal Article
Yokoyama, R., de Oliveira, M. V. V., Takeda-Kimura, Y., Ishihara, H., Alseekh, S., Arrivault, S., Kukshal, V., Jez, J. M., Stitt, M., Fernie, A. R. & Maeda, H. A. Point mutations that boost aromatic amino acid production and CO2 assimilation in plants. Science Advances 8, (2022).
Journal Article
Fünfgeld, M. F. F., Wang, W., Ishihara, H., Arrivault, S., Feil, R., Smith, A. M., Stitt, M., Lunn, J. E. & Niittylä, T. Sucrose synthases are not involved in starch synthesis in Arabidopsis leaves. Nature Plants 8, 574–582 (2022).
Journal Article
Treves, H., Küken, A., Arrivault, S., Ishihara, H., Hoppe, I., Erban, A., Höhne, M., Moraes, T. A., Kopka, J., Szymanski, J., Nikoloski, Z. & Stitt, M. Carbon flux through photosynthesis and central carbon metabolism show distinct patterns between algae, C-3 and C-4 plants. Nature Plants 8, 78–91 (2021).
Journal Article
Ishihara, H., Moraes, T. A., Arrivault, S. & Stitt, M. Assessing Protein Synthesis and Degradation Rates in Arabidopsis thaliana Using Amino Acid Analysis. Current Protocols 1, (2021).
Journal Article
Krahmer, J., Abbas, A., Mengin, V., Ishihara, H., Romanowski, A., Furniss, J. J., Moraes, T. A., Krohn, N., Annunziata, M. G., Feil, R., Alseekh, S., Obata, T., Fernie, A. R., Stitt, M. & Halliday, K. J. Phytochromes control metabolic flux, and their action at the seedling stage determines adult plant biomass. Journal of Experimental Botany 72, 3263–3278 (2021).
Journal Article
Ermakova, M., Arrivault, S., Giuliani, R., Danila, F., Alonso-Cantabrana, H., Vlad, D., Ishihara, H., Feil, R., Guenther, M., Borghi, G. L., Covshoff, S., Ludwig, M., Cousins, A. B., Langdale, J. A., Kelly, S., Lunn, J. E., Stitt, M., von Caemmerer, S. & Furbank, R. T. Installation of C4 photosynthetic pathway enzymes in rice using a single construct. Plant Biotechnology Journal 19, 575–588 (2020).
Journal Article
Vaid, N., Ishihara, H., Plötner, B., Sageman-Furnas, K., Wiszniewski, A. A. G. & Laitinen, R. Leaf chlorosis in Arabidopsis thaliana hybrids is associated with transgenerational decline and imbalanced ribosome number. New Phytologist 228, 989–1000 (2020).
Journal Article
Fernandez, O., Ishihara, H., George, G. M., Mengin, V., Flis, A., Sumner, D., Arrivault, S., Feil, R., Lunn, J. E., Zeeman, S. C., Smith, A. M. & Stitt, M. Leaf Starch Turnover Occurs in Long Days and in Falling Light at the End of the Day. Plant Physiology 174, 2199–2212 (2017).
Journal Article
Ishihara, H., Moraes, T. A., Pyl, E. T., Schulze, W. X., Obata, T., Scheffel, A., Fernie, A. R., Sulpice, R. & Stitt, M. Growth rate correlates negatively with protein turnover in Arabidopsis accessions. The Plant Journal 91, 416–429 (2017).
Journal Article
Coluccio Leskow, C., Kamenetzky, L., Guadalupe Dominguez, P., Diaz Zirpolo, J. A., Obata, T., Costa, H., Marti, M., Taboga, O., Keurentjes, J., Sulpice, R., Ishihara, H., Stitt, M., Fernie, A. R. & Carrari, F. Allelic differences in a vacuolar invertase affect Arabidopsis growth at early plant development. Journal of Experimental Botany 67, 4091–4103 (2016).
Journal Article
Figueroa, C. M., Feil, R., Ishihara, H., Watanabe, M., Kolling, K., Krause, U., Höhne, M., Encke, B., Plaxton, W. C., Zeeman, S. C., Li, Z., Schulze, W. X., Hoefgen, R., Stitt, M. & Lunn, J. E. Trehalose 6-phosphate coordinates organic and amino acid metabolism with carbon availability. The Plant Journal 85, 410–423 (2016).
Journal Article
Ishihara, H., Tohge, T., Viehover, P., Fernie, A. R., Weisshaar, B. & Stracke, R. Natural variation in flavonol accumulation in Arabidopsis is determined by the flavonol glucosyltransferase BGLU6. Journal of Experimental Botany 67, 1505–1517 (2016).
Journal Article
Tohge, T., Wendenburg, R., Ishihara, H., Nakabayashi, R., Watanabe, M., Sulpice, R., Hoefgen, R., Takayama, H., Saito, K., Stitt, M. & Fernie, A. R. Characterization of a recently evolved flavonol-phenylacyltransferase gene provides signatures of natural light selection in Brassicaceae. Nature Communications 7, (2016).
Journal Article
Ishihara, H., Obata, T., Sulpice, R., Fernie, A. R. & Stitt, M. Quantifying Protein Synthesis and Degradation in Arabidopsis by Dynamic 13CO2 Labeling and Analysis of Enrichment in Individual Amino Acids in Their Free Pools and in Protein. Plant Physiology 168, 74–93 (2015).
Journal Article
Pal, S. K., Liput, M., Piques, M., Ishihara, H., Obata, T., Martins, M. C., Sulpice, R., van Dongen, J. T., Fernie, A. R., Yadav, U. P., Lunn, J. E., Usadel, B. & Stitt, M. Diurnal changes of polysome loading track sucrose content in the rosette of wildtype Arabidopsis and the starchless pgm mutant. Plant Physiology 162, 1246–1265 (2013).
Journal Article
Pyl, E. T., Piques, M., Ivakov, A., Schulze, W., Ishihara, H., Stitt, M. & Sulpice, R. Metabolism and Growth in Arabidopsis Depend on the Daytime Temperature but Are Temperature-Compensated against Cool Nights. Plant Cell 24, 2443–2469 (2012).
Journal Article
Sulpice, R., Pyl, E. T., Ishihara, H., Trenkamp, S., Steinfath, M., Witucka-Wall, H., Gibon, Y., Usadel, B., Poree, F., Piques, M. C., von Korff, M., Steinhauser, M.-C., Keurentjes, J. J. B., Guenther, M., Hoehne, M., Selbig, J., Fernie, A. R., Altmann, T. & Stitt, M. Starch as a major integrator in the regulation of plant growth. Proceedings of the National Academy of Sciences of the United States of America 106, 10348–10353 (2009).

Review Article (1)

Review Article
Sulpice, R., Ishihara, H., Schlereth, A., Cawthray, G. R., Encke, B., Giavalisco, P., Ivakov, A., Arrivault, S., Jost, R., Krohn, N., Kuo, J., Laliberte, E., Pearse, S. J., Raven, J. A., Scheible, W.-R., Teste, F., Veneklaas, E. J., Stitt, M. & Lambers, H. Low levels of ribosomal RNA partly account for the very high photosynthetic phosphorus-use efficiency of Proteaceae species. Plant, Cell and Environment 36, 1276–1298 (2013).
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