Max-Planck-Institut für Molekulare Pflanzenphysiologie

Publikationen, gefiltert

Zeitschriftenartikel (103)

1.

Zeitschriftenartikel

Fernie, A. R.: Spotlight on “Proximity proteomics reveals a mechanism of fatty acid transfer at lipid droplet-mitochondria- endoplasmic reticulum contact sites” by Bezawork-Geleta et al. 2025. Journal of Mitochondria, Plastids and Endosymbiosis 3 (1), 2493930 (2025)

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2.

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Satanowski, A.; Marchal, D.G.; Perret, A.; Petit, J.-L.; Bouzon, M.; Döring, V.; Dubois, I.; He, H.; Smith, E.N.; Pellouin, V. et al.; Petri, H.M.; Rainaldi, V.; Nattermann, M.; Burgener, S.; Paczia, N.; Zarzycki, J.; Heinemann, M.; Bar-Even, A.; Erb, T.J.: Design and implementation of aerobic and ambient CO2-reduction as an entry-point for enhanced carbon fixation. Nature Communications 16 (1), 3134 (2025)

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3.

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Sacharowski, S.; Kubala, S.; Cwiek, P.; Steciuk, J.; Gratkowska-Zmuda, D.; Oksinska, P.; Bucior, E.; Rolicka, A.; Ciesla, M.; Nowicka, K. et al.; Alseekh, S.; Tohge, T.; Giavalisco, P.; Zugaj, D.; Stolze, S.; Harzen, A.; Franzen, R.; Huettel, B.; Grzesiuk, E.; Hajirezaei, M.; Nakagami, H.; Koncz, C.; Fernie, A. R.; Sarnowski, T.: BAF60/SWP73 subunits define subclasses of SWI/SNF chromatin remodelling complexes in Arabidopsis. New Phytologist 247 (2), S. 791 - 812 (2025)

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4.

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Wendering, P.; Andreou, G.M.; Laitinen, R.A.E.; Nikoloski, Z.: Metabolic modeling identifies determinants of thermal growth responses in Arabidopsis thaliana. New Phytologist 247 (1), S. 178 - 190 (2025)

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5.

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Dao, O.; Bertrand, M.; Alseekh, S.; Veillet, F.; Auroy, P.; Nguyen, P.-C.; Légeret, B.; Epting, V.; Morin, A.; Cuiné, S. et al.; Monteil, C. L.; Mackinder, L. C. M.; Burlacot, A.; Krieger-Liszkay, A.; Weber, A. P. M.; Fernie, A. R.; Peltier, G.; Li-Beisson, Y.: The green algae CO2 concentrating mechanism and photorespiration jointly operate during acclimation to low CO2. Nature Communications 16, 5296 (2025)

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6.

Zeitschriftenartikel

de Oliveira, P.; de Souza, L. P.; Ferreira, P.; Mauxion, J.; da Silva, L.; Chang, A.; Saleme, M.; Zhu, F.; Garcia, S.; De Beukelaer, H. et al.; Martins, M.; Rosado-Souza, L.; Pino, L.; Bollier, N.; Peres, L.; Vandepoele, K.; Goossens, A.; Gonzalez, N.; Fernie, A. R.; Eloy, N.: Modulating the activity of the APC/C regulator SISAMBA improves the sugar and antioxidant content of tomato fruits. Plant Biotechnology Journal (2025)

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7.

Zeitschriftenartikel

Karakas, E.; Bulut, M.; Fernie, A. R.: Metabolome guided treasure hunt - lerning from metabolic diversity. Journal of Plant Physiology 309, 154494 (2025)

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8.

Zeitschriftenartikel

Karakas, E.; Bulut, M.; Fernie, A. R.: The use of web resources for metabolomics in horticultural crops. Horticulture Advances 3, 18 (2025)

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9.

Zeitschriftenartikel

Liu, H.; El-Azaz, J.; Yobi, A.; Yokoyama, R.; Wu, S.; Chin-Quee, A.; Gorman, Z.; Angelovici, R.; Block, A.; Maeda, H. et al.; McCarty, D.; Suzuki, M.: Maize big embryo 6 reveals roles of plastidial and cytosolic prephenate aminotransferases in seed and plant development. Plant Cell 37 (6), koaf067 (2025)

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10.

Zeitschriftenartikel

Qin, K.; Liu, F.; Zhang, C.; Deng, R.; Fernie, A. R.; Zhang, Y.: Systems and synthetic biology for plant natural product pathway elucidation. Cell Reports Methods 44 (6), 115715 (2025)

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11.

Zeitschriftenartikel

Swain, J.; Fernie, A. R.; Foyer, C.H.; Gupta, K.J.: The Multifaceted Metabolic Role of Lactate Dehydrogenase in Submergence Tolerance. Plant, Cell and Environment (2025)

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12.

Zeitschriftenartikel

Tiozon, R. J. N.; Ong, G.; Sartagoda, K.; Duque, S.; Alseekh, S.; Bonto, A.; Gempesaw, S. J.; Pratap, V.; Reginio, F. J.; Tengco, J. et al.; Seagan, C.; Tolentino, J.; Santiago, D.; Fernie, A. R.; Sreenivasulu, N.: Optimization of phenolic extraction method and in vitro bioaccessibility of microencapsulated pigmented rice bran extracts and their antioxidant and anticancer properties. FOOD HYDROCOLLOIDS FOR HEALTH 7, 100221 (2025)

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13.

Zeitschriftenartikel

Wagner, M.; Kang, J.; Mercado, C.; Thirumlaikumar, V. P.; Gorka, M.; Zillmer, H.; Guo, J.; Minen, R. I.; Plecki, C. F.; Dehesh, K. et al.; Schroeder, F. C.; Walther, D.; Skirycz, A.: Mapping protein-metabolite interactions in E. coli by integrating chromatographic techniques and co-fractionation mass spectrometry. iScience 28 (6), 112611 (2025)

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14.

Zeitschriftenartikel

Wang, L.; Wang, Y.; Feil, R.; MacNeill, G. J.; Lunn, J. E.; Tetlow, I. J.; Emes, M. J.: Plastidial starch phosphorylase regulates maltodextrin turnover during starch granule initiation in Arabidopsis leaves. Plant Physiology 198 (2), kiaf216 (2025)

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15.

Zeitschriftenartikel

Zou, R.; Lu, Z.; Djamei, A.; Kragler, F.; Lam, H.-M.; Zhang, S.: The Roles of Epigenetics in the Interplay Between Beneficial Rhizobacteria and Plants. Modern Agriculture 3 (1), e70017 (2025)

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16.

Zeitschriftenartikel

Asao, S.; Way, D. A.; Turnbull, M. H.; Stitt, M.; McDowell, N. G.; Reich, P. B.; Bloomfield, K. J.; Zaragoza-Castells, J.; Creek, D.; O'Sullivan, O. et al.; Crous, K. Y.; Egerton, J. J.G.; Mirotchnick, N.; Weerasinghe, L. K.; Griffin, K. L.; Hurry, V.; Meir, P.; Sitch, S.; Atkin, O. K.: Leaf nonstructural carbohydrate residence time, not concentration, correlates with leaf functional traits following the leaf economic spectrum in woody plants. New Phytologist 246 (4), S. 1505 - 1519 (2025)

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17.

Zeitschriftenartikel

da Luz, L.M.; Valente, L.M.L.; Medeiros, D.B.; Batista-Silva, W.; da Costa, L.C.; Oliveira, F.S.; Martins, S.C.V.; Fernie, A. R.; Nunes-Nesi, A.; Araújo, W.L.: Functional lack of SLAC1 modifies guard cell metabolism without impacting photosynthesis under elevated [CO2] and moderated water restriction. Environmental and Experimental Botany 233, 106142 (2025)

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18.

Zeitschriftenartikel

Fernie, A. R.; Bulut, M.: Design of future climate smart crops by engineering heat stress-responsive gene expression. Molecular Plant 18 (5), S. 738 - 740 (2025)

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19.

Zeitschriftenartikel

Flexas, J.; Fernie, A. R.; Usadel, B.; Alonso-Forn, D.; Ardiles, V.; Ball, M. C.; Ballesteros, D.; Bravo, L.; Brodribb, T. J.; Carriquí, M. et al.; Castanyer-Mallol, F.; Cavieres, L. A.; Chondol, T.; Clemente-Moreno, M. J.; Coopman, R. E.; Corcuera, L.; De Vries, J.; Diaz-Espejo, A.; Dolezal, J.; Ergo, V.; Fernández, H.; Fernández-Marín, B.; Galmes, J.; García-Plazaola, J. I.; Quintanilla, L. G.; Gulías, J.; Hernández, A.; Luo, K.; Martínez-Abaigar, J.; Nadal, M.; Niinemets, Ü.; Núñez-Olivera, M. E.; Ostria-Gallardo, E.; Perera-Castro, A. V.; Pérez-López, U.; Ribas-Carbo, M.; Roig-Oliver, M.; Rojas, R.; Sáez, P.; Tosens, T.; Viveros, R.; Xiong, D.; Yan, J.; Zhang, Y.; Gago, J.: What can we learn from the ecophysiology of plants inhabiting extreme environments?: from ‘sherplants’ to ‘shercrops’. Journal of Experimental Botany, eraf236 (2025)

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20.

Zeitschriftenartikel

Gonzalez-Duran, E.; Kroop, X.; Schadach, A.; Bock, R.: Suppression of plastid-to-nucleus gene transfer by DNA double-strand break repair. Nature Plants 11, S. 1154 - 1164 (2025)

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21.

Zeitschriftenartikel

Langary, D.; Küken, A.; Nikoloski, Z.: Kinetic modules are sources of concentration robustness in biochemical networks. Science Advances 11 (22), eads7269 (2025)

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22.

Zeitschriftenartikel

Leer, M.; Soultoukis, G. A.; Jähnert, M.; Oveisi, M.; Walther, D.; Schulz, T. J.: pubCounteR: an R package for interrogating published literature for experimentally-derived gene lists within a user-defined biological context. Frontiers in Bioinformatics Volume 5, 1523184 (2025)

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23.

Zeitschriftenartikel

Mbebi, A. J.; Mercado, F.; Hobby, D.; Tong, H.; Nikoloski, Z.: Advances in multi-trait genomic prediction approaches: classification, comparative analysis, and perspectives. Briefings in Bioinformatics 26 (3), bbaf211 (2025)

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24.

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Minen, R. I.; Camalle, M. D.; Schwertfeger, T. J.; Abdulhakim, F.; Reish, H.; Perez de Souza, L.; Moreno, J. C.; Schilmiller, A.; Thirumalaikumar, V. P.; Agarwal, P. et al.; Plecki, C. F.; Fernie, A. R.; Hirt, H.; Schroeder, F. C.; Skirycz, A.: Characterization of the cyclic dipeptide cyclo(His-Pro) in Arabidopsis. Plant Physiology 198 (1), kiaf174 (2025)

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25.

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Nejamkin, A.; Oneto, C.; Zhang, Y.; Luquet, M.; Galatro, A.; Del Castello, F.; Massa, G.; Feingold, S.; Fernie, A. R.; Lamattina, L. et al.; Correa-Aragunde, N.; Foresi, N.: Metabolic Profiling Reveals Increased Nitrogen Remobilization in Potato Plants that Express a Cyanobacterial NO/NO3-Producing Enzyme. Journal of Plant Growth Regulation (2025)

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26.

Zeitschriftenartikel

Orsucci, M.; Sartori, K.; Lombardi, A.; Vanikiotis, T.; Ouvrard, P.; Wärdig, C.; Messer, M.; Köhler, C.; Sicard, A.: Sexual selection drives the speciation of lineages with contrasting mating systems. Current Biology 35 (10), S. 2406 - 2413 (2025)

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27.

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Orsucci, M.; Sartori, K.; Lombardi, A.; Vanikiotis, T.; Ouvrard, P.; Wärdig, C.; Wa, C.; Messer, M.; Köhler, C.; Sicard, A.: Report Sexual selection drives the speciation of lineages with contrasting mating systems. Current Biology 35 (10), S. 2406 - 2413 (2025)

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28.

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Paries, M.; Hobecker, K.; Hernández Luelmo, S.; Binci, F.; Guercio, A.; Usländer, A.; Cardoso, C.; Si, Y.; Wankner, L.; Bashyal, S. et al.; Troycke, P.; Brückner , F.; Pimprikar, P.; Shabek, N.; Gutjahr, C.: The GRAS protein RAM1 interacts with WRI transcription factors to regulate plant genes required for arbuscule development and function. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 122 (21), e2427021122 (2025)

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29.

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Ranner, J.; Stabl, G.; Martyniak, C.; Paries, M.; Spaccasassi, A.; Gutjahr, C.; Stark, T.; Dawid, C.: Comprehensive Quantification of (Poly)phenols in Lotus japonicus with and without Arbuscular Mycorrhizal Symbiosis. Journal of Agricultural and Food Chemistry 73 (22), S. 14044 - 14057 (2025)

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30.

Zeitschriftenartikel

Ranner, J. L.; Stabl, G.; Piller, A.; Paries, M.; Sharma, S.; Zeng, T.; Spaccasassi, A.; Stark, T. D.; Gutjahr, C.; Dawid, C.: Untargeted metabolomics reveals novel metabolites in Lotus japonicus roots during arbuscular mycorrhiza symbiosis. New Phytologist 246 (3), S. 1256 - 1275 (2025)

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31.

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Ruf, S.; Trösch, R.; Schollbach, L.; Kroop, X.; Forner, J.; Gefen-Treves, S.; Henze, A.; Thiele, W.; Schöttler, M. A.; Zoschke, R. et al.; Bock, R.: Reverse genetics in the Arabidopsis chloroplast genome identifies rps16 as a transcribed pseudogene. The Plant Journal 122 (3), e70198 (2025)

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32.

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Schatz, D.; Le Blevenec, A.; Moratti, F. G.; Chung, K. P.; Mercier, P.; Iqbal, R.; Vallet, E.; Dietrich, A.; Bock, R.; Weber-Lotfi, F. et al.; Gualberto, J.: R-loop control and mitochondrial genome stability require the 5′-3′ exonuclease/flap endonuclease OEX1. Plant Cell 37 (5), koaf104 (2025)

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33.

Zeitschriftenartikel

Shrestha, A.; König, T.; Meikle, L.; Westhoff, P.; Erban, A.; Stich, B.: Morphological, Physiological, and Metabolic Responses of Diverse Barley Inbreds to Dry Down and Moderate Drought Stress. FOOD AND ENERGY SECURITY 14 (3), e70102 (2025)

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34.

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Singh, A.; Rajendran, R.; Schöttler, M. A.; Li, X.; Liu, Q.; Muntaha, S. N.; Fettke, J.: The plastidial glucan phosphorylase modulates maltodextrin metabolism and affects starch parameters in Arabidopsis thaliana. Journal of Experimental Botany 76 (8), S. 2222 - 2238 (2025)

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35.

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Wang, Z.; He, Y.; Zhao, M.; Liu, X.-Q.; Lin, H.; Shi, Y.; Zhang, K.; Lei, G.; Lai, D.; Liu, T. et al.; Peng, X.; He, J.; Li, W.; Wang, X.; Woo, S.-H.; Quinet, M.; Fernie, A. R.; Huang, X.-Y.; Zhou, M.: Genome-Wide Association Studies Reveal the Genetic Architecture of Ionomic Variation in Grains of Tartary Buckwheat. Advanced Science 12 (17), 2412291 (2025)

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36.

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Fernie, A. R.; Martinez-Rivas, F.: Br(e)aking the tomato fruit size-sweetness trade-off. Trends in Plant Science 30 (4), S. 350 - 351 (2025)

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37.

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Fernie, A. R.; Zhu, F.: Chemical disarmament in plant defense: Erucamide blocks bacterial type III injectisome assembly. Developmental Cell 60 (8), S. 1140 - 1141 (2025)

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38.

Zeitschriftenartikel

Gomez Coronado, P. A.; Kubis, A.; Kowald, M.; Rahma, U.; Cotton, C. A. R.; Lindner, S. N.; Bar-Even, A.; Erb, T. J.: Two highly specific growth-coupled biosensor for glycolaldehyde detection across micromolar and millimolar concentrations. Synthetic Biology 10 (1), ysaf004 (2025)

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39.

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Hobby, D.; Tong, H.; Heuermann, M.; Mbebi, A. J.; Laitinen, R. A. E.; Dell’Acqua, M.; Altmann, T.; Nikoloski, Z.: Predicting plant trait dynamics from genetic markers. Nature Plants 11, S. 1018 - 1027 (2025)

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40.

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Hong, Z.-H.; Zhu, L.; Gao, L.-L.; Zhu, Z.; Su, T.; Krall, L.; Wu, X.-N.; Bock, R.; Wu, G.-Z.: Chloroplast precursor protein preClpD overaccumulation triggers multilevel reprogramming of gene expression and a heat shock-like response. Nature Communications 16 (1), 3777 (2025)

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41.

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Hsieh, Y. E.; Yang, S.-Y.; Liu, S.-L.; Wang, S.-W.; Wang, W.-L.; Tang, S.-L.; Yang, S.-H.: Microbial Community Shifts and Nitrogen Utilization in Peritidal Microbialites: The Role of Salinity and pH in Microbially Induced Carbonate Precipitation. Microbial Ecology 88 (1), 31 (2025)

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42.

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Kragler, F.; Bock, R.: The biology of grafting and its applications in studying information exchange between plants. Nature Plants 11, S. 955 - 966 (2025)

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43.

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Li, Y.; Yang, Z.; Li, K.; Yang, C.; Lei, L.; Li, J.; Zhou, J.; Hou, H.; Liu, H.; Xiong, X. et al.; Zhan, C.; Shen, S.; Liu, X.; Maher, M.; Ahmad, H.; Fernie, A. R.; Luo, J.: Two major rice loci determine rice-staple food populations differences in vitamin B1 deficiency levels. Science Bulletin 70 (7), S. 1046 - 1050 (2025)

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44.

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Martins, A. O.; Silva, W. A.; Vallarino, J. G.; Omena-Garcia, R. P.; Osorio, S.; Fernie, A. R.; Nunes-Nesi, A.; Ribeiro, D. M.; Araújo, W. L.: Reductions of endogenous gibberellin content impact fruit development and modify tomato fruit metabolism during ripening. Plant Growth Regulation 105, S. 497 - 514 (2025)

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45.

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Müller, C.; dos Anjos, L.; Freire, F.B.S.; Fernie, A. R.; Daloso, D.M.; Eller, C.B.; Merchant, A.: Metabolic network plasticity underpins Eucalyptus water use efficiency under drought. Environmental and Experimental Botany 232, 106127 (2025)

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46.

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Paajanen, P.; Tomkins, M.; Hoerbst, F.; Veevers, R.; Heeney, M.; Thomas, H. R.; Apelt, F.; Saplaoura, E.; Gupta, S.; Frank, M. et al.; Walther, D.; Faulkner, C.; Kehr, J.; Kragler, F.; Morris, R. J.: Re-analysis of mobile mRNA datasets raises questions about the extent of long-distance mRNA communication. Nature Plants 11, S. 977 - 984 (2025)

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47.

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Raza, A.; Anas, M.; Bhardwaj, S.; Mir, R.A.; Charagh, S.; Elahi, M.; Zhang, X.; Mir, R.R.; Weckwerth, W.; Fernie, A. R. et al.; Siddique, K.H.M.; Hu, Z.; Varshney, R.K.: Harnessing metabolomics for enhanced crop drought tolerance. The Crop Journal 13 (2), S. 311 - 327 (2025)

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48.

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Seyis, M.; Razaghi-Moghadam, Z.; Nikoloski, Z.: Flux-sum coupling analysis of metabolic network models. PLOS Computational Biology 21 (4), e1012972 (2025)

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49.

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Sun, Y.; Bock, R.; Li, Z.: A hidden intrinsic ability of bicistronic expression based on a novel translation reinitiation mechanism in yeast. Nucleic Acids Research 53 (6), gkaf220 (2025)

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50.

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Sweetlove, L.; Ratcliffe, R.; Fernie, A. R.: Non-canonical plant metabolism. Nature Plants 11, S. 696 - 708 (2025)

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