Max-Planck-Institut für Molekulare Pflanzenphysiologie

Publikationen, gefiltert

Zeitschriftenartikel (193)

1.

Zeitschriftenartikel

Porto, N.P.; Bret, R.S.C.; Souza, P.V.L.; Cândido-Sobrinho, S.A.; Medeiros, D.B.; Fernie, A. R.; Daloso, D. M.: Thioredoxins regulate the metabolic fluxes throughout the tricarboxylic acid cycle and associated pathways in a light-independent manner. Plant Physiology and Biochemistry 193, S. 36 - 49 (2022)

MPG.PuRe

2.

Zeitschriftenartikel

Garg, V.; Dudchenko, O.; Wang, J.; Khan, A.W.; Gupta, S.; Kaur, P.; Han, K.; Saxena, R.K.; Kale, S.M.; Pham, M. et al.; Yu, J.; Chitikineni, A.; Zhang, Z.; Fan, G.; Lui, C.; Valluri, V.; Meng, F.; Bhandari, A.; Liu, X.; Yang, T.; Chen, H.; Valliyodan, B.; Roorkiwal, M.; Shi, C.; Yang, H.B.; Durand, N.C.; Pandey, M.K.; Li, G.; Barmukh, R.; Wang, X.; Chen, X.; Lam, H.-M.; Jiang, H.; Zong, X.; Liang, X.; Liu, X.; Liao, B.; Guo, B.; Jackson, S.; Nguyen, H.T.; Zhuang, W.; Shubo, W.; Wang, X.; Aiden, E.L.; Bennetzen, J.L.; Varshney, R.K.: Chromosome-length genome assemblies of six legume species provide insights into genome organization, evolution, and agronomic traits for crop improvement. Journal of Advanced Research 42, S. 315 - 329 (2022)

MPG.PuRe

3.

Zeitschriftenartikel

Ahouvi, Y.; Haber, Z.; Zach, Y. Y.; Rosental, L.; Toubiana, D.; Sharma, D.; Alseekh, S.; Tajima, H.; Fernie, A. R.; Brotman, Y. et al.; Blumwald, E.; Sade, N.: The Alteration Of Tomato CHLOROPLAST VESICULATION Positively Affects Whole-Plant Source–Sink Relations And Fruit Metabolism Under Stress Conditions. Plant and Cell Physiology 63 (12), S. 2008 - 2026 (2022)

MPG.PuRe

4.

Zeitschriftenartikel

Aleman, J.; H., G.; Thirumalaikumar, V. P.; Jander, G.; Fernie, A. R.; Skirycz, A.: OPDA, more than just a jasmonate precursor. Phytochemistry 204, 113432 (2022)

MPG.PuRe

5.

Zeitschriftenartikel

Loiacono, F.V.; Walther, D.; Seeger, S.; Thiele, W.; Gerlach, I.; Karcher, D.; Schöttler, M. A.; Zoschke, R.; Bock, R.: Emergence of novel RNA editing sites by changes in the binding affinity of a conserved PPR protein. Molecular Biology and Evolution 39 (12), msac222 (2022)

MPG.PuRe

6.

Zeitschriftenartikel

Omranian, N.; Nikoloski, Z.: CUBCO+: prediction of protein complexes based on min-cut network partitioning into biclique spanned subgraphs. Applied Network Science 7, 71 (2022)

MPG.PuRe

7.

Zeitschriftenartikel

Ostendorp, A.; Ostendorp, S.; Zhou, Y.; Chaudron, Z.; Wolffram, L.; Rombi, K.; von Pein, L.; Falke, S.; Jeffries, C. M.; Svergun, D. I. et al.; Betzel, C.; Morris, R. J.; Kragler, F.; Kehr, J.: Intrinsically disordered plant protein PARCL co-localizes with RNA in phase-separated condensates whose formation can be regulated by mutating the PLD. The Journal of Biological Chemistry 298 (12), 102631 (2022)

MPG.PuRe

8.

Zeitschriftenartikel

Pinto, S. S.; Martins, A. O.; Fontes, L. F. P.; Oliveira, F. S.; Almeida, I. C.; Detoni, I. B.; Oliveira, L. A.; Silva, W. B.; Medeiros, D.B.; Picoli, E. A. T. et al.; Ribeiro, A.; Fernie, A. R.; DaMatta, F. M.; Martins, S. C. V.; Araújo, W. L.: Elevated [CO2] mitigates the impacts of heat stress in eucalyptus seedlings. Theoretical and Experimental Plant Physiology 34, S. 447 - 462 (2022)

MPG.PuRe

9.

Zeitschriftenartikel

Soares, F.; Pimentel, D.; Erban, A.; Neves, C.; Reis, P.; Pereira, M.; Rego, C.; Gama-Carvalho, M.; Kopka, J.; Fortes, A. M.: Virulence-related metabolism is activated in Botrytis cinerea mostly in the interaction with tolerant green grapes that remain largely unaffected in contrast with susceptible green grapes. Horticulture Research 9, uhac217 (2022)

MPG.PuRe

10.

Zeitschriftenartikel

Tomkins, M.; Hoerbst, F.; Gupta, S.; Apelt, F.; Kehr, J.; Kragler, F.; Morris, R. J.: Exact Bayesian inference for the detection of graft-mobile transcripts from sequencing data. Journal of the Royal Society Interface 19 (197), 20220644 (2022)

MPG.PuRe

11.

Zeitschriftenartikel

Wawrzyńska, A.; Piotrowska, J.; Apodiakou, A.; Brückner, F.; Hoefgen, R.; Sirko, A.: The SLIM1 transcription factor affects sugar signaling during sulfur deficiency in Arabidopsis thaliana. Journal of Experimental Botany 73 (22), S. 7362 - 7379 (2022)

MPG.PuRe

12.

Zeitschriftenartikel

Shi, Z.; Li, H.; Zhang, W.; Chen, Y.; Zeng, C.; Kang, X.; Xu, X.; Xia, Z.; Qing, B.; Yuan, Y. et al.; Song, G.; Caldana, C.; Hu, J.; Willmitzer, L.; Li, Y.: A Comprehensive Mass Spectrometry-Based Workflow for Clinical Metabolomics Cohort Studies. Metabolites 12 (12), 1168 (2022)

MPG.PuRe

13.

Zeitschriftenartikel

Zhang, W.; Lai, C.; Huang, W.; Li, W.; Wu, S.; Kong, Q.; Hopkinson, A.; Fernie, A. R.; Siu, K.; Yan, S.: An eco-friendly, low-cost, and automated strategy for phosphoproteome profiling. Green Chemistry 24, S. 9697 - 9708 (2022)

MPG.PuRe

14.

Zeitschriftenartikel

Caldana, C.; Fernie, A. R.: Plant biology: Identification of the connecTOR linking metabolism, epigenetics and development. Current Biology 32 (22), S. R1272 - R1274 (2022)

MPG.PuRe

15.

Zeitschriftenartikel

Wiszniewski, A.A.G.; Uberegui, E.; Messer, M.; Sultanova, G.; Borghi, M.; Duarte, G. T.; Vicente, R.; Sageman-Furnas, K.; Fernie, A. R.; Nikoloski, Z. et al.; Laitinen, R. A.E.: Temperature-mediated flower size plasticity in Arabidopsis. iScience 25 (11), 105411 (2022)

MPG.PuRe

16.

Zeitschriftenartikel

Kishor, P. B. K.; Tiozon, R. J. N.; Fernie, A. R.; Sreenivasulu, N.: Abscisic acid and its role in the modulation of plant growth, development, and yield stability. Trends in Plant Science 27 (12), S. 1283 - 1295 (2022)

MPG.PuRe

17.

Zeitschriftenartikel

Apriyanto, A.; Compart, J.; Zimmermann, V.; Alseekh, S.; Fernie, A. R.; Fettke, J.: Indication that starch and sucrose are biomarkers for oil yield in oil palm (Elaeis guineensis Jacq.). FOOD CHEMISTRY 393, 133361 (2022)

MPG.PuRe

18.

Zeitschriftenartikel

Balparda, M.; Schmitz, J.; Duemmel, M.; Wuthenow, I. C.; Schmidt, M.; Alseekh, S.; Fernie, A. R.; Lercher, M. J.; Maurino, V. G.: Viridiplantae-specific GLXI and GLXII isoforms co-evolved and detoxify glucosone in planta. Plant Physiology 191 (2), S. 1214 - 1233 (2022)

MPG.PuRe

19.

Zeitschriftenartikel

Bohra, A.; Tiwari, A.; Kaur, P.; Ganie, S. A.; Raza, A.; Roorkiwal, M.; Mir, R. R.; Fernie, A. R.; Smýkal, P.; Varshney, R. K.: The Key to the Future Lies in the Past: Insights from Grain Legume Domestication and Improvement Should Inform Future Breeding Strategies. Plant and Cell Physiology 63 (11), S. 1554 - 1572 (2022)

MPG.PuRe

20.

Zeitschriftenartikel

Chen, L.; Zhao, H.; Chen, Y.; Jiang, F.; Zhou, F.; Liu, Q.; Fan, Y.; Liu, T.; Tu, W.; Walther, D. et al.; Song, B.: Comparative transcriptomics analysis reveals a calcineurin B-like gene to positively regulate constitutive and acclimated freezing tolerance in potato. Plant, Cell and Environment 45 (11), S. 3305 - 3321 (2022)

MPG.PuRe

21.

Zeitschriftenartikel

Klein, H.; Gallagher, J.; Demesa-Arevalo, E.; Abraham-Juárez, M. J.; Heeney, M.; Feil, R.; Lunn, J. E.; Xiao, Y.; Chuck, G.; Whipple, C. et al.; Jackson, D.; Bartlett, M.: Recycling amino acids ensures meiosis and seed development. Proceedings of the National Academy of Sciences of the United States of America 119 (2), e2115871119 (2022)

MPG.PuRe

22.

Zeitschriftenartikel

Li, X.; Deng, D.; Cataltepe, G.; Román, Á.; Buckley, C.R.; Monte Bello, C.C.; Skirycz, A.; Caldana, C.; Haydon, M.J.: A reactive oxygen species Ca2+ signalling pathway identified from a chemical screen for modifiers of sugar-activated circadian gene expression. New Phytologist 236 (3), S. 1027 - 1041 (2022)

MPG.PuRe

23.

Zeitschriftenartikel

Mehring, A.; Zayed, A.; Salem, M.A.; Alseekh, S.; Fernie, A.; Ulber, R.: Time-dependent behaviour of methyl jasmonate elicited cell suspension cultures of Ocimum species via untargeted mass spectrometry-based metabolomics. Industrial Crops and Products 187 (Part A), 115414 (2022)

MPG.PuRe

24.

Zeitschriftenartikel

Ribeiro, T.P.; Vasquez, D.D.N.; Macedo, L.L.P.; Lourenço-Tessutti, I.T.; Valença, D.C.; Oliveira-Neto, O.B.; Paes-de-Melo, B.; Rodrigues-Silva, P.L.; Firmino, A.; Basso, M.F. et al.; Lins, C.B.J.; Neves, M.R.; Moura, S.M.; Tripode, B.M.D.; Miranda, J.E.; Silva, M.C.M.; Grossi-de-Sa, M.F.: Stabilized Double-Stranded RNA Strategy Improves Cotton Resistance to CBW (Anthonomus grandis). International Journal of Molecular Sciences 23 (22), 13713 (2022)

MPG.PuRe

25.

Zeitschriftenartikel

Sun, Y.; Guo, J.; Ruan, Y.; Zhang, T.; Fernie, A. R.; Yuan, H.: The recruitment of specific rhizospheric bacteria facilitates Stevia rebaudiana salvation under nitrogen and/or water deficit stresses. Industrial Crops and Products 187 (B), 115434 (2022)

MPG.PuRe

26.

Zeitschriftenartikel

Tan, J.; Forner, J.; Karcher, D.; Bock, R.: DNA base editing in nuclear and organellar genomes. Trends in Genetics 38 (11), S. 1147 - 1169 (2022)

MPG.PuRe

27.

Zeitschriftenartikel

Turlin, J.; Dronsella, B.; de Maria, A.; Lindner, S. N.; Nikel, P. I.: Integrated rational and evolutionary engineering of genome-reduced Pseudomonas putida strains promotes synthetic formate assimilation. Metabolic Engineering 74, S. 191 - 205 (2022)

MPG.PuRe

28.

Zeitschriftenartikel

Yang, M.-K.; Zhu, X.-J.; Chen, C.-M.; Guo, X.; Xu, S.-X.; Xu, Y.-R.; Du, S.-X.; Xiao, S.; Mueller-Roeber, B.; Huang, W. et al.; Chen, L.: The plant circadian clock regulates autophagy rhythm through transcription factor LUX ARRHYTHMO. Journal of Integrative Plant Biology 64 (11), S. 2135 - 2149 (2022)

MPG.PuRe

29.

Zeitschriftenartikel

Li, Y.; Yang, Z.; Yang, C.; Liu, Z.; Shen, S.; Zhan, C.; Lyu, Y.; Zhang, F.; Li, K.; Shi, Y. et al.; Zhou, J.; Liu, X.; Fang, C.; Fernie, A. R.; Li, J.; Luo, J.: The NET locus determines the food taste, cooking and nutrition quality of rice. Science Bulletin 67, S. 2045 - 2049 (2022)

MPG.PuRe

30.

Zeitschriftenartikel

Yin, Z.; Dong, T.; Huang, W.; Du, M.; Chen, D.; Fernie, A. R.; Yi, G.; Yan, S.: Spatially resolved metabolomics reveals variety-specific metabolic changes in banana pulp during postharvest senescence. FOOD CHEMISTRY: X 15, 100371 (2022)

MPG.PuRe

31.

Zeitschriftenartikel

Sedaghatmehr, M.; Stüwe, B.; Mueller-Roeber, B.; Balazadeh, S.: Heat shock factor HSFA2 fine-tunes resetting of thermomemory via plastidic metalloprotease FtsH6. Journal of Experimental Botany 73 (18), S. 6394 - 6404 (2022)

MPG.PuRe

32.

Zeitschriftenartikel

Lucius, S.; Theune, M.; Arrivault, S.; Hildebrandt, S.; Mullineaux, C.; Gutekunst, K.; Hagemann, M.: CP12 fine-tunes the Calvin-Benson cycle and carbohydrate metabolism in cyanobacteria. Frontiers in Plant Science 13, 1028794 (2022)

MPG.PuRe

33.

Zeitschriftenartikel

Zhang, Y.; Fernie, A. R.: Metabolite profiling of Arabidopsis mutants of lower glycolysis. Scientific Data 9 (1), 614 (2022)

MPG.PuRe

34.

Zeitschriftenartikel

Sayed, S.M.A.; Alseekh, S.; Siems, K.; Fernie, A. R.; Luyten, W.; Schmitz-Linneweber, C.; Saul, N.: Identification of a Hydroxygallic Acid Derivative, Zingibroside R1 and a Sterol Lipid as Potential Active Ingredients of Cuscuta chinensis Extract That Has Neuroprotective and Antioxidant Effects in Aged Caenorhabditis elegans. Nutrients 14 (19), 4199 (2022)

MPG.PuRe

35.

Zeitschriftenartikel

Hölscher, M.; Forner, J.; Calderone, S.; Krämer, C.; Taylor, Z.; Loiacono, F.V.; Agrawal, S.; Karcher, D.; Moratti, F. G.; Kroop, X. et al.; Bock, R.: Expression strategies for the efficient synthesis of antimicrobial peptides in plastids. Nature Communications 13, 5856 (2022)

MPG.PuRe

36.

Zeitschriftenartikel

Blankenagel, S.; Eggels, S.; Frey, M.; Grill, E.; Bauer, E.; Dawid, C.; Fernie, A. R.; Haberer, G.; Hammerl, R.; Medeiros, D.B. et al.; Ouzunova, M.; Presterl, T.; Ruß, V.; Schäufele, R.; Schlüter, U.; Tardieu, F.; Urbany, C.; Urzinger, S.; Weber, A. P. M.; Schön, C.-C.; Avramova, V.: Natural alleles of the abscisic acid catabolism gene ZmAbh4 modulate water use efficiency and carbon isotope discrimination in maize. The Plant Cell 34 (10), S. 3860 - 3872 (2022)

MPG.PuRe

37.

Zeitschriftenartikel

Brigante, F. I.; Lucini Mas, A.; Erban, A.; Fehrle, I.; Martinez-Seidel, F.; Kopka, J.; Wunderlin, D. A.; Baroni, M. V.: Authenticity assessment of commercial bakery products with chia, flax and sesame seeds: Application of targeted and untargeted metabolomics results from seeds and lab-scale cookies. Food control 140, 109114 (2022)

MPG.PuRe

38.

Zeitschriftenartikel

Buenafe, R.J.; Tiozon, R. J. N.; Boyd, L.A.; Sartagoda, K.J.; Sreenivasulu, N.: Mathematical modeling to predict rice's phenolic and mineral content through multispectral imaging. Food Chemistry Advances 1, 100141 (2022)

MPG.PuRe

39.

Zeitschriftenartikel

Chen, L.; Luo, J.; Jin, M.; Yang, N.; Liu, X.; Peng, Y.; Li, W.; Phillips, A.; Cameron, B.; Bernal, J. S. et al.; Rellán-Álvarez, R.; Sawers, R. J. H.; Liu, Q.; Yin, Y.; Ye, X.; Yan, J.; Zhang, Q.; Zhang, X.; Wu, S.; Gui, S.; Wei, W.; Wang, Y.; Luo, Y.; Jiang, C.; Deng, M.; Jin, M.; Jian, L.; Yu, Y.; Zhang, M.; Yang, X.; Hufford, M. B.; Fernie, A. R.; Warburton, M. L.; Ross-Ibarra, J.; Yan, J.: Genome sequencing reveals evidence of adaptive variation in the genus Zea. Nature Genetics 54, S. 1736 - 1745 (2022)

MPG.PuRe

40.

Zeitschriftenartikel

de Souza, L. P.; Naake, T.; Fernie, A. R.: Computational approaches that aid annotation in metabolomics. Trends in Plant Science 27 (10), S. 1077 - 1078 (2022)

MPG.PuRe

41.

Zeitschriftenartikel

Orf, I.; Tenenboim, H.; Omranian, N.; Nikoloski, Z.; Fernie, A. R.; Lisec, J.; Brotman, Y.; Bromke, M.A.: Transcriptomic and Metabolomic Analysis of a Pseudomonas-Resistant versus a Susceptible Arabidopsis Accession. International Journal of Molecular Sciences 23 (20), 12087 (2022)

MPG.PuRe

42.

Zeitschriftenartikel

Sato, H.; Köhler, C.: Genomic imprinting regulates establishment and release of seed dormancy. Current Opinion in Plant Biology 69, 102264 (2022)

MPG.PuRe

43.

Zeitschriftenartikel

Schulten, A.; Pietzenuk, B.; Quintana, J.; Scholle, M.; Feil, R.; Krause, M.; Romera-Branchat, M.; Wahl, V.; Severing, E.; Coupland, G. et al.; Krämer, U.: Energy status-promoted growth and development of Arabidopsis require copper deficiency response transcriptional regulator SPL7. The Plant Cell 34 (10), S. 3873 - 3898 (2022)

MPG.PuRe

44.

Zeitschriftenartikel

Zhan, C.; Shen, S.; Yang, C.; Liu, Z.; Fernie, A. R.; Graham, I. A.; Luo, J.: Plant metabolic gene clusters in the multi-omics era. Trends in Plant Science 27 (10), S. 981 - 1001 (2022)

MPG.PuRe

45.

Zeitschriftenartikel

Zhao, J.; Bui, M. T.; Ma, J.; Künzl, F.; Picchianti, L.; La Concepcion, D.; Carlos, J.; Chen, Y.; Petsangouraki, S.; Mohseni, A. et al.; García-Leon, M.; Gomez, M. S.; Giannini, C.; Gwennogan, D.; Kobylinska, R.; Clavel, M.; Schellmann, S.; Jaillais, Y.; Friml, J.; Kang, B.-H.; Dagdas, Y.: Plant autophagosomes mature into amphisomes prior to their delivery to the central vacuole. Journal of Cell Biology 221 (12), e202203139 (2022)

MPG.PuRe

46.

Zeitschriftenartikel

Ciuffa, R.; Uliana, F.; Mannion, J.; Mehnert, M.; Tenev, T.; Marulli, C.; Satanowski, A.; Keller, L.M.L.; Rodilla Ramírez, P.N.; Ori, A. et al.; Gstaiger, M.; Meier, P.; Aebersold, R.: Novel biochemical, structural, and systems insights into inflammatory signaling revealed by contextual interaction proteomics. Proceedings of the National Academy of Sciences of the United States of America 119 (40), e21171751 (2022)

MPG.PuRe

47.

Zeitschriftenartikel

Silva, F. M. d. O.; Bulgarelli, R. G.; Mubeen, U.; Caldana, C.; Andrade, S. A. L.; Mazzafera, P.: Low phosphorus induces differential metabolic responses in eucalyptus species improving nutrient use efficiency. Frontiers in Plant Science 13, 989827 (2022)

MPG.PuRe

48.

Zeitschriftenartikel

Dai, L.; Wang, B.; Wang, T.; Meyer, E. H.; Kettel, V.; Hoffmann, N.; McFarlane, H. E.; Li, S.; Wu, X.; Picard, K. L. et al.; Giavalisco, P.; Persson, S.; Zhang, Y.: The TOR complex controls ATP levels to regulate actin cytoskeleton dynamics in Arabidopsis. Proceedings of the National Academy of Sciences of the United States of America 119 (38), e2122969119 (2022)

MPG.PuRe

49.

Zeitschriftenartikel

Steinhorst, L.; He, G.; Moore, L. K.; Schültke, S.; Schmitz-Thom, I.; Cao, Y.; Hashimoto, K.; Andrés, Z.; Piepenburg, K.; Ragel, P. et al.; Behera, S.; Almutairi, B. O.; Batistič, O.; Wyganowski, T.; Köster, P.; Edel, K. H.; Zhang, C.; Krebs, M.; Jiang, C.; Guo, Y.; Quintero, F. J.; Bock, R.; Kudla, J.: A Ca2+-sensor switch for tolerance to elevated salt stress in Arabidopsis. Developmental Cell 57 (17), S. 2081 - 2094 (2022)

MPG.PuRe

50.

Zeitschriftenartikel

Barros, J. A. S.; Cavalcanti, J. H. F.; Pimentel, K. G.; Medeiros, D.B.; Silva, J. C. F.; Condori-Apfata, J. A.; Lapidot-Cohen, T.; Brotman, Y.; Nunes-Nesi, A.; Fernie, A. R. et al.; Avin-Wittenberg, T.; Araújo, W. L.: The Significance of WRKY45 Transcription Factor in Metabolic Adjustments During Dark-induced Leaf Senescence. Plant, Cell and Environment (9), S. 2682 - 2695 (2022)

MPG.PuRe