Publikationen, gefiltert

Zeitschriftenartikel (228)

1.
Zeitschriftenartikel
Calderan-Rodrigues, M.J.; Luzarowski, M.; Monte Bello, C.C.; Minen, R.I.; Zühlke, B. M.; Nikoloski, Z.; Skirycz, A.; Caldana, C.: Proteogenic Dipeptides Are Characterized by Diel Fluctuations and Target of Rapamycin Complex-Signaling Dependency in the Model Plant Arabidopsis thaliana. Frontiers in Plant Science 12, 758933 (2021)
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2.
Zeitschriftenartikel
Treves, H.; Küken, A.; Arrivault, S.; Ishihara, H.; Hoppe, I.; Erban, A.; Höhne, M.; Moraes, T. A.; Kopka, J.; Szymanski, J. et al.; Nikoloski, Z.; Stitt, M.: Carbon flux through photosynthesis and central carbon metabolism show distinct patterns between algae, C-3 and C-4 plants. Nature Plants 8, S. 78 - 91 (2021)
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3.
Zeitschriftenartikel
Martinez-Seidel, F.; Hsieh, Y.-C.; Walther, D.; Kopka, J.; Firmino, A.: COSNet(i): ComplexOme-Structural Network Interpreter used to study spatial enrichment in metazoan ribosomes. BMC Bioinformatics 22, 605 (2021)
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4.
Zeitschriftenartikel
David, Z.; Swart, C.; Graf, A.; Arrivault, S.; Tillich, M.; Proost, S.; Nikoloski, Z.; Stitt, M.; Bock, R.; Mühlhaus, M. et al.; Boulouis, A.: Topology of the redox network during induction of photosynthesis as revealed by time-resolved proteomics in tobacco. Science Advances 7 (51), eabi8307 (2021)
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5.
Zeitschriftenartikel
Frusciante, S.; Demurtas, O. C.; Sulli, M.; Mini, P.; Aprea, G.; Diretto, G.; Karcher, D.; Bock, R.; Giuliano, G.: Heterologous expression of Bixa orellana cleavage dioxygenase 4–3 drives crocin but not bixin biosynthesis. Plant Physiology 188 (3), S. 1469 - 1482 (2021)
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6.
Zeitschriftenartikel
Verbančič, J.; Huang, J.J.; McFarlane, H.E.: Analysis of cellulose synthase activity in Arabidopsis using spinning disk microscopy. STAR Protocols 2 (4), 100863 (2021)
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7.
Zeitschriftenartikel
Shen, S.; Peng, M.; Fang, H.; Wang, Z.; Zhou, S.; Jing, X.; Zhang, M.; Yang, C.; Guo, H.; Li, Y. et al.; Lei, L.; Shi, Y.; Sun, Y.; Liu, X.; Xu, C.; Tohge, T.; Yuan, M.; Fernie, A. R.; Ning, Y.; Wang, G.; Luo, J.: An Oryza-specific hydroxycinnamoyl tyramine gene cluster contributes to enhanced disease resistance. Science Bulletin 66 (23), S. 2369 - 2380 (2021)
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8.
Zeitschriftenartikel
Qiu, Y.; Köhler, C.: Endosperm evolution by duplicated and neofunctionalized Type I MADS-box transcription factors. Molecular Biology and Evolution 39 (1), msab355 (2021)
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9.
Zeitschriftenartikel
Fadoul, H.E.; Martinez Rivas, F.J.; Neumann, K.; Balazadeh, S.; Fernie, A. R.; Alseekh, S.: Comparative molecular and metabolic profiling of two contrasting wheat cultivars under drought stress. International Journal of Molecular Sciences 22 (24), 13287 (2021)
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10.
Zeitschriftenartikel
Hashemi, S.; Razaghi-Moghadam, Z.; Nikoloski, Z.: Identification of flux trade-offs in metabolic networks. Scientific Reports 11 (1), 23776 (2021)
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11.
Zeitschriftenartikel
Siani, R.; Stabl, G.; Gutjahr, C.; Schloter, M.; Radl, V.: Acidovorax pan-genome reveals specific functional traits for plant beneficial and pathogenic plant-associations. Microbial Genomics 7 (12), 000666 (2021)
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12.
Zeitschriftenartikel
Zsögön, A.; Peres, L. E. P.; Xiao, Y.; Yan, J.; Fernie, A. R.: Enhancing crop diversity for food security in the face of climate uncertainty. The Plant Journal 109 (2), S. 402 - 414 (2021)
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13.
Zeitschriftenartikel
Fàbregas, N.; Fernie, A. R.: The reliance of phytohormone biosynthesis on primary metabolite precursors. Journal of Plant Physiology 268, 153589 (2021)
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14.
Zeitschriftenartikel
Qin, K.; Fernie, A. R.; Zhang, Y.: The assembly of super-complexes in the plant chloroplast. Biomolecules 11 (12), 1839 (2021)
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15.
Zeitschriftenartikel
Fàbregas, N.; Fernie, A. R.: The interface of central metabolism with hormone signaling in plants. Current Biology 31 (23), S. R1535 - R1548 (2021)
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16.
Zeitschriftenartikel
Tiozon, R.J.N.; Bonto, A.; Sreenivasulu, N.: Enhancing the functional properties of rice starch through biopolymer blending for industrial applications: A review. International Journal of Biological Macromolecules 192, S. 100 - 117 (2021)
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17.
Zeitschriftenartikel
Wagner, M.; Zhang, B.; Tauffenberger, A.; Schroeder, F.C.; Skirycz, A.: Experimental methods for dissecting the terraincognita of protein-metabolite interactomes. Current Opinion in Systems Biology 28, 100403 (2021)
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18.
Zeitschriftenartikel
Kasote, D.; Tiozon, R.J.N.; Sartagoda, K. J. D.; Itagi, H.; Roy, P.; Kohli, A.; Regina, A.; Sreenivasulu, N.: Food Processing Technologies to Develop Functional Foods With Enriched Bioactive Phenolic Compounds in Cereals. Frontiers in Plant Science 12, 771276 (2021)
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19.
Zeitschriftenartikel
Curtin, S.; Qi, Y.; Peres, L. E. P.; Fernie, A. R.; Zsögön, A.: Pathways to de novo domestication of crop wild relatives. Plant Physiology 188 (4), S. 1746 - 1756 (2021)
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20.
Zeitschriftenartikel
Ginsawaeng, O.; Heise, C.; Sangwan, R.; Karcher, D.; Hernández-Sánchez, I.E.; Sampathkumar, A.; Zuther, E.: Subcellular Localization of Seed-Expressed LEA_4 Proteins Reveals Liquid-Liquid Phase Separation for LEA9 and for LEA48 Homo- and LEA42-LEA48 Heterodimers. Biomolecules 11 (12), 1770 (2021)
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21.
Zeitschriftenartikel
Joshi, J.; Hasnain, G.; Logue, T.; Lynch, M.; Wu, S.; Guan, J.; Alseekh, S.; Fernie, A. R.; Hanson, A.; McCarty, D.: A Core Metabolome Response of Maize Leaves Subjected to Long-Duration Abiotic Stresses. Metabolites 11 (11), 797 (2021)
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22.
Zeitschriftenartikel
Candido-Sobrinho, S.; Lima, V.; Freire, F.; de Souza, L. P.; Gago, J.; Fernie, A. R.; Daloso, D.: Metabolism-mediated mechanisms underpin the differential stomatal speediness regulation among ferns and angiosperms. Plant, Cell and Environment 45 (2), S. 296 - 311 (2021)
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23.
Zeitschriftenartikel
Zhu, F.; Alseekh, S.; Wen, W.; Cheng, Y.; Fernie, A. R.: Genome-wide association studies of Arabidopsis dark-induced senescence reveals signatures of autophagy in metabolic reprogramming. Autophagy 18 (2), S. 457 - 458 (2021)
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24.
Zeitschriftenartikel
Oliver, C.; Annacondia, M. L.; Wang, Z.; Jullien, P. E.; Slotkin, R. K.; Köhler, C.; Martinez, G.: The miRNome function transitions from regulating developmental genes to transposable elements during pollen maturation. The Plant Cell 34 (2), S. 784 - 801 (2021)
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25.
Zeitschriftenartikel
Machado, M.; Vaz, M. G. M. V.; Bromke, M. A.; Rosa, R. M.; Covell, L.; de Souza, L. P.; Rocha, D. I.; Martins, M. A.; Araújo, W. L.; Szymański, J. et al.; Nunes-Nesi, A.: Metabolic stability of freshwater Nitzschia palea strains under silicon stress associated with triacylglycerol accumulation. Algal Research 60, 102554 (2021)
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26.
Zeitschriftenartikel
Gabriel, C.; Fernhout, J.-J.; Fichtner, F.; Feil, R.; Lunn, J. E.; Kossmann, J.; Lloyd, J. R.; van der Vyver, C.: Genetic manipulation of trehalose-6-phosphate synthase results in changes in the soluble sugar profile in transgenic sugarcane stems. Plant Direct 5 (11), e358 (2021)
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27.
Zeitschriftenartikel
da Fonseca-Pereira, P.; Pham, P. A.; Cavalcanti, J. H. F.; Omena-Garcia, R. P.; Barros, J. A. S.; Rosado-Souza, L.; Vallarino, J. G.; Mutwil, M.; Avin-Wittenberg, T.; Nunes-Nesi, A. et al.; Fernie, A. R.; Araújo, W. L.: The Arabidopsis electron-transfer flavoprotein:ubiquinone oxidoreductase is required during normal seed development and germination. The Plant Journal 109 (1), S. 196 - 214 (2021)
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28.
Zeitschriftenartikel
Del-Saz, N. F.; Douthe, C.; Carriquí, M.; Ortíz, J.; Sanhueza, C.; Rivas-Medina, A.; McDonald, A.; Fernie, A. R.; Ribas-Carbo, M.; Gago, J. et al.; Florez-Sarasa, I.; Flexas, J.: Different Metabolic Roles for Alternative Oxidase in Leaves of Palustrine and Terrestrial Species. Frontiers in Plant Science 12, 752795 (2021)
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29.
Zeitschriftenartikel
Wang, S.; Xiao, Y.; Zhou, Z.-W.; Yuan, J.; Guo, H.; Yang, Z.; Yang, J.; Sun, P.; Sun, L.; Deng, Y. et al.; Xie, W.-Z.; Song, J.-M.; Qamar, M. T. u.; Xia, W.; Liu, R.; Gong, S.; Wang, Y.; Wang, F.; Liu, X.; Fernie, A. R.; Wang, X.; Fan, H.; Chen, L.-L.; Luo, J.: High-quality reference genome sequences of two coconut cultivars provide insights into evolution of monocot chromosomes and differentiation of fiber content and plant height. Genome Biology: Biology for the Post-Genomic Era 22 (1), 304 (2021)
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30.
Zeitschriftenartikel
Clavel, M.; Lechner, E.; Incarbone, M.; Vincent, T.; Cognat, V.; Smirnova, E.; Lecorbeiller, M.; Brault, V.; Ziegler-Graff, V.; Genschik, P.: Atypical molecular features of RNA silencing against the phloem-restricted polerovirus TuYV. Nucleic Acids Research 49 (19), S. 11274 - 11293 (2021)
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31.
Zeitschriftenartikel
Incarbone, M.; Clavel, M.; Monsion, B.; Kuhn, L.; Scheer, H.; Vantard, E.; Poignavent, V.; Dunoyer, P.; Genschik, P.; Ritzenthaler, C.: Immunocapture of dsRNA-bound proteins provides insight into Tobacco rattle virus replication complexes and reveals Arabidopsis DRB2 to be a wide-spectrum antiviral effector. Plant Cell 33 (11), S. 3402 - 3420 (2021)
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32.
Zeitschriftenartikel
Schmid, C.; Mittermeier-Klessinger, V.; Peters, V.; Berger, F.; Kramler, M.; Heuberger, H.; Rinder, R.; Hofmann, T.; Gutjahr, C.; Dawid, C.: Quantitative Mapping of Flavor and Pharmacologically Active Compounds in European Licorice Roots (Glycyrrhiza glabra L.) in Response to Growth Conditions and Arbuscular Mycorrhiza Symbiosis. Journal of Agricultural and Food Chemistry 69 (44), S. 13173 - 13189 (2021)
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33.
Zeitschriftenartikel
Jiang, X.; Zhang, W.; Fernie, A. R.; Wen, W.: Combining novel technologies with interdisciplinary basic research to enhance horticultural crops. The Plant Journal 109 (1), S. 35 - 46 (2021)
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34.
Zeitschriftenartikel
Wang, J. Y.; Alseekh, S.; Xiao, T.; Ablazov, A.; de Souza, L. P.; Fiorilli, V.; Anggarani, M.; Lin, P.-Y.; Votta, C.; Novero, M. et al.; Jamil, M.; Lanfranco, L.; Hsing, Y.-I. C.; Blilou, I.; Fernie, A.; Al-Babili, S.: Multi-omics approaches explain the growth-promoting effect of the apocarotenoid growth regulator zaxinone in rice. Communications Biology 4, 1222 (2021)
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35.
Zeitschriftenartikel
Borràs, D.; Barchi, L.; Schulz, K.; Moglia, A.; Acquadro, A.; Kamranfar, I.; Balazadeh, S.; Lanteri, S.: Transcriptome-Based Identification and Functional Characterization of NAC Transcription Factors Responsive to Drought Stress in Capsicum annuum L. Frontiers in Genetics 12, 743902 (2021)
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36.
Zeitschriftenartikel
Angeleska, A.; Omranian, N.; Nikoloski, Z.: Coherent network partitions: Characterizations with cographs and prime graphs. Theoretical computer science 894, S. 3 - 11 (2021)
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37.
Zeitschriftenartikel
Zhu, F.; Alseekh, S.; Koper, K.; Tong, H.; Nikoloski, Z.; Naake, T.; Liu, H.; Yan, J.; Brotman, Y.; Wen, W. et al.; Maeda, H.; Cheng, Y.; Fernie, A. R.: Genome-wide association of the metabolic shifts underpinning dark-induced senescence in Arabidopsis. The Plant Cell 34 (1), S. 557 - 578 (2021)
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38.
Zeitschriftenartikel
Clavel, M.; Dagdas, Y.: Proteasome and selective autophagy: Brothers-in- arms for control. Current Opinion in Plant Biology 63, 102106 (2021)
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39.
Zeitschriftenartikel
Schaarschmidt, S.; Glaubitz, U.; Erban, A.; Kopka, J.; Zuther, E.: Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance. International Journal of Molecular Sciences 22 (19), 10451 (2021)
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40.
Zeitschriftenartikel
Pimentel, D.; Amaro, R.; Erban, A.; Mauri, N.; Soares, F.; Rego, C.; Martínez-Zapater, J.M.; Mithöfer, A.; Kopka, J.; Fortes, A.M.: Transcriptional, hormonal, and metabolic changes in susceptible grape berries under powdery mildew infection. Journal of Experimental Botany 72 (18), S. 6544 - 6569 (2021)
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41.
Zeitschriftenartikel
Wang, Q.; Bao, X.; Chen, S.; Zhong, H.; Liu, Y.; Zhang, L.; Xia, Y.; Kragler, F.; Luo, M.; Li, X. et al.; Lam, H.-M.; Zhang, S.: AtHDA6 functions as an H3K18ac eraser to maintain pericentromeric CHG methylation in Arabidopsis thaliana. Nucleic Acids Research 49 (17), S. 9755 - 9767 (2021)
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42.
Zeitschriftenartikel
Omini, J.; Wojciechowska, I.; Skirycz, A.; Moriyama, H.; Obata, T.: Association of the malate dehydrogenase-citrate synthase metabolon is modulated by intermediates of the Krebs tricarboxylic acid cycle. Scientific Reports 11 (1), 18770 (2021)
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43.
Zeitschriftenartikel
Omranian, N.; Angeleska, A.; Nikoloski, Z.: Efficient and accurate identification of protein complexes from protein-protein interaction networks based on the clustering coefficient. Computational and Structural Biotechnology Journal 19, S. 5255 - 5263 (2021)
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44.
Zeitschriftenartikel
DeTar, R.A.; Barahimipour, R.; Manavski, N.; Schwenkert, S.; Höhner, R.; Bölter, B.; Inaba, T.; Meurer, J.; Zoschke, R.; Kunz, H.-H.: Erratum: Loss of inner-envelope K +/H + exchangers impairs plastid rRNA maturation and gene expression. The Plant Cell 33 (12), S. 3746 - 3746 (2021)
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45.
Zeitschriftenartikel
Nieva, A.S.; Romero, F. M.; Erban, A.; Carrasco, P.; Ruiz, O. A.; Kopka, J.: Metabolic Profiling and Metabolite Correlation Network Analysis Reveal That Fusarium solani Induces Differential Metabolic Responses in Lotus japonicus and Lotus tenuis against Severe Phosphate Starvation. Journal of Fungi 7 (9), 765 (2021)
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46.
Zeitschriftenartikel
Muralidhara, P.; Weiste, C.; Collani, S.; Krischke, M.; Kreisz, P.; Draken, J.; Feil, R.; Mair, A.; Teige, M.; Müller, M. J. et al.; Schmid, M.; Becker, D.; Lunn, J. E.; Rolland, F.; Hanson, J.; Dröge-Laser, W.: Perturbations in plant energy homeostasis prime lateral root initiation via SnRK1-bZIP63-ARF19 signaling. Proceedings of the National Academy of Sciences of the United States of America 118 (37), e2106961118 (2021)
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47.
Zeitschriftenartikel
Gao, J.; van Kleeff, P.J.M.; de Boer, M.H.; Erban, A.; Kopka, J.; Hincha, D. K.; de Boer, A.H.: Ion Homeostasis and Metabolome Analysis of Arabidopsis 14-3-3 Quadruple Mutants to Salt Stress. Frontiers in Plant Science 12, 697324 (2021)
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48.
Zeitschriftenartikel
Tuvia, N.; Pivovarova-Ramich, O.; Murahovschi, V.; Lück, S.; Grudziecki, A.; Ost, A.-C.; Kruse, M.; Nikiforova, V.; Osterhoff, M.; Gottmann, P. et al.; GÖgebakan, {.; Sticht, C.; Gretz, N.; Schupp, M.; Schürmann, A.; Rudovich, N.; Pfeiffer, A. F.H.; Kramer, A.: Insulin directly regulates the circadian clock in adipose tissue. Diabetes 70 (6), S. 1985 - 1999 (2021)
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49.
Zeitschriftenartikel
Yuan, H.; Cao, G.; Hou, X.; Huang, M.; Du, P.; Tan, T.; Zhang, Y.; Zhou, H.; Liu, X.; Liu, L. et al.; Jiangfang, Y.; Li, Y.; Liu, Z.; Fang, C.; Zhao, L.; Fernie, A. R.; Luo, J.: Development of a widely targeted volatilomics method for profiling volatilomes in plants. Molecular Plant 15 (1), S. 189 - 202 (2021)
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50.
Zeitschriftenartikel
Jin, C.; Fang, C.; Zhang, Y.; Fernie, A. R.; Luo, J.: Plant metabolism paves the way for breeding crops with high nutritional value and stable yield. Science China Life Sciences 64, S. 2202 - 2205 (2021)
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