Publications of A. R. Fernie

Osorio, S., Ruan, Y.-L. & Fernie, A. R. An update on source-to-sink carbon partitioning in tomato. Frontiers in Plant Science 5, 516–516 (2014).

Tohge, T. & Fernie, A. R. Lignin, mitochondrial family, and photorespiratory transporter classification as case studies in using co-expression, co-response, and protein locations to aid in identifying transport functions. Frontiers in Plant Science 5, (2014).

Sweetlove, L. J., Obata, T. & Fernie, A. R. Systems analysis of metabolic phenotypes – what have we learnt? Trends in Plant Science 19, 222–230 (2013).

Fernie, A. R., Bauwe, H., Eisenhut, M., Florian, A., Hanson, D. T., Hagemann, M., Keech, O., Mielewczik, M., Nikoloski, Z., Peterhansel, C., Roje, S., Sage, R., Timm, S., von Cammerer, S., Weber, A. P. & Westhoff, P. Perspectives on plant photorespiratory metabolism. Plant Biology 15, 748–753 (2013).

Florian, A., Araujo, W. L. & Fernie, A. R. New insights into photorespiration obtained from metabolomics. Plant Biology 15, 656–666 (2013).

Hagemann, M., Fernie, A. R., Espie, G. S., Kern, R., Eisenhut, M., Reumann, S., Bauwe, H. & Weber, A. P. Evolution of the biochemistry of the photorespiratory C2 cycle. Plant Biology 15, 639–647 (2013).

Obata, T., Fernie, A. & Nunes-Nesi, A. The Central Carbon and Energy Metabolism of Marine Diatoms. Metabolites 3, 325–346 (2013).

Tohge, T., Watanabe, M., Hoefgen, R. & Fernie, A. R. The evolution of phenylpropanoid metabolism in the green lineage. Critical Reviews in Biochemistry and Molecular Biology 48, 123–152 (2013).

Toubiana, D., Fernie, A. R., Nikoloski, Z. & Fait, A. Network analysis: tackling complex data to study plant metabolism. Trends in Biotechnology 31, 29–36 (2013).

Fernie, A. R. Grand Challenges in Plant Systems Biology: Closing the Circle(s). Frontiers in Plant Science 3, 35 (2012).

Fernie, A. R., Obata, T., Allen, A. E., Araujo, W. L. & Bowler, C. Leveraging metabolomics for functional investigations in sequenced marine diatoms. Trends in Plant Science 17, 395–403 (2012).

Fitzpatrick, T. B., Basset, G. J., Borel, P., Carrari, F., DellaPenna, D., Fraser, P. D., Hellmann, H., Osorio, S., Rothan, C., Valpuesta, V., Caris-Veyrat, C. & Fernie, A. R. Vitamin deficiencies in humans: can plant science help? The Plant Cell 24, 395–414 (2012).

Kirma, M., Araujo, W. L., Fernie, A. R. & Galili, G. The multifaceted role of aspartate-family amino acids in plant metabolism. Journal of Experimental Botany 63, 4995–5001 (2012).

Obata, T. & Fernie, A. R. The use of metabolomics to dissect plant responses to abiotic stresses. Cellular and Molecular Life Sciences 69, 3225–3243 (2012).

Ruan, Y. L., Patrick, J. W., Bouzayen, M., Osorio, S. & Fernie, A. R. Molecular regulation of seed and fruit set. Trends in Plant Science 17, 656–665 (2012).

Araujo, W. L., Fernie, A. R. & Nunes-Nesi, A. Control of stomatal aperture: A renaissance of the old guard. Plant Signaling & Behavior 6, 1305–1311 (2011).

Araujo, W. L., Tohge, T., Ishizaki, K., Leaver, C. J. & Fernie, A. R. Protein degradation - an alternative respiratory substrate for stressed plants. Trends in Plant Science 16, 489–498 (2011).

Fernie, A. R. & Klee, H. J. The use of natural genetic diversity in the understanding of metabolic organization and regulation. Frontiers in Plant Science 2, 59 (2011).

Gupta, K. J., Fernie, A. R., Kaiser, W. M. & van Dongen, J. T. On the origins of nitric oxide. Trends in Plant Science 16, 160–168 (2011).

Haferkamp, I., Fernie, A. R. & Neuhaus, H. E. Adenine nucleotide transport in plants: much more than a mitochondrial issue. Trends in Plant Science 16, 507–515 (2011).