Publications of T. Tohge

Chen, L., Lee, J. H., Weber, H., Tohge, T., Witt, S., Roje, S., Fernie, A. R. & Hellmann, H. Arabidopsis BPM Proteins Function as Substrate Adaptors to a CULLIN3-Based E3 Ligase to Affect Fatty Acid Metabolism in Plants. The Plant Cell 25, 2253–2264 (2013).

Antonio, C., Mustafa, N. R., Osorio, S., Tohge, T., Giavalisco, P., Willmitzer, L., Rischer, H., Oksman-Caldentey, K. M., Verpoorte, R. & Fernie, A. R. Analysis of the interface between primary and secondary metabolism in Catharanthus roseus cell cultures using 13C-stable isotope feeding and coupled mass spectrometry. Molecular Plant 6, 581–584 (2013).

Archacki, R., Buszewicz, D., Sarnowski, T. J., Sarnowska, E., Rolicka, A. T., Tohge, T., Fernie, A. R., Jikumaru, Y., Kotlinski, M., Iwanicka-Nowicka, R., Kalisiak, K., Patryn, J., Halibart-Puzio, J., Kamiya, Y., Davis, S. J., Koblowska, M. K. & Jerzmanowski, A. BRAHMA ATPase of the SWI/SNF Chromatin Remodeling Complex Acts as a Positive Regulator of Gibberellin-Mediated Responses in Arabidopsis. PLoS One 8, (2013).

Brotman, Y., Landau, U., Cuadros-Inostroza, A., Tohge, T., Fernie, A. R., Chet, I., Viterbo, A. & Willmitzer, L. Trichoderma-Plant Root Colonization: Escaping Early Plant Defense Responses and Activation of the Antioxidant Machinery for Saline Stress Tolerance. PLoS Pathogens 9, (2013).

Fernie, A. R. & Tohge, T. Plastic, fantastic! Phenotypic variance in the transcriptional landscape of the grape berry. Genome Biology 14, (2013).

Koenig, D., Jimenez-Gomez, J. M., Kimura, S., Fulop, D., Chitwood, D. H., Headland, L. R., Kumar, R., Covington, M. F., Devisetty, U. K., Tat, A. V., Tohge, T., Bolger, A. M., Schneeberger, K., Ossowski, S., Lanz, C., Xiong, G., Taylor-Teeples, M., Brady, S. M., Pauly, M., Weigel, D., Usadel, B., Fernie, A. R., Peng, J., Sinha, N. R. & Maloof, J. N. Comparative transcriptomics reveals patterns of selection in domesticated and wild tomato. Proceedings of the National Academy of Sciences of the United States of America 110, E2655–E2662 (2013).

Saito, K., Yonekura-Sakakibara, K., Nakabayashi, R., Higashi, Y., Yamazaki, M., Tohge, T. & Fernie, A. R. The flavonoid biosynthetic pathway in Arabidopsis: Structural and genetic diversity. Plant Physiology and Biochemistry 72, 21–34 (2013).

Szecowka, M., Heise, R., Tohge, T., Nunes-Nesi, A., Vosloh, D., Huege, J., Feil, R., Lunn, J., Nikoloski, Z., Stitt, M., Fernie, A. R. & Arrivault, S. Metabolic Fluxes in an Illuminated Arabidopsis Rosette. The Plant Cell 25, 694–714 (2013).

Tahir, J., Watanabe, M., Jing, H. C., Hunter, D. A., Tohge, T., Nunes-Nesi, A., Brotman, Y., Fernie, A. R., Hoefgen, R. & Dijkwel, P. P. Activation of R-mediated innate immunity and disease susceptibility is affected by mutations in a cytosolic O-acetylserine (thiol) lyase in Arabidopsis. The Plant Journal 73, 118–130 (2013).

Tohge, T., Watanabe, M., Hoefgen, R. & Fernie, A. R. Shikimate and phenylalanine biosynthesis in the green lineage. Frontiers in Plant Science 4, 62 (2013).

Watanabe, M., Balazadeh, S., Tohge, T., Erban, A., Giavalisco, P., Kopka, J., Mueller-Roeber, B., Fernie, A. R. & Hoefgen, R. Comprehensive dissection of spatio-temporal metabolic shifts in primary, secondary and lipid metabolism during developmental senescence in Arabidopsis thaliana. Plant Physiology 162, 1290–1310 (2013).

Tohge, T. & Fernie, A. R. Co-expression and co-responses: within and beyond transcription. Frontiers in Plant Science 3, (2012).

Alejandro, S., Lee, Y., Tohge, T., Sudre, D., Osorio, S., Park, J., Bovet, L., Lee, Y., Geldner, N., Fernie, A. R. & Martinoia, E. AtABCG29 Is a Monolignol Transporter Involved in Lignin Biosynthesis. Current Biology 22, 1207–1212 (2012).

Araujo, W. L., Tohge, T., Nunes-Nesi, A., Daloso, D. M., Nimick, M., Krahnert, I., Bunik, V. I., Moorhead, G. B. & Fernie, A. R. Phosphonate analogs of 2-oxoglutarate perturb metabolism and gene expression in illuminated Arabidopsis leaves. Frontiers in plant science 3, 114 (2012).

Araujo, W. L., Tohge, T., Osorio, S., Lohse, M., Balbo, I., Krahnert, I., Sienkiewicz-Porzucek, A., Usadel, B., Nunes-Nesi, A. & Fernie, A. R. Antisense Inhibition of the 2-Oxoglutarate Dehydrogenase Complex in Tomato Demonstrates Its Importance for Plant Respiration and during Leaf Senescence and Fruit Maturation. The Plant Cell 24, 2328–2351 (2012).

Gechev, T. S., Benina, M., Obata, T., Tohge, T., Sujeeth, N., Minkov, I., Hille, J., Temanni, M. R., Marriott, A. S., Bergstrom, E., Thomas-Oates, J., Antonio, C., Mueller-Roeber, B., Schippers, J. H., Fernie, A. R. & Toneva, V. Molecular mechanisms of desiccation tolerance in the resurrection glacial relic Haberlea rhodopensis. Cellular and Molecular Life Sciences 70, 689–709 (2012).

Rohrmann, J., McQuinn, R., Giovannoni, J., Fernie, A. R. & Tohge, T. Tissue specificity and differential expression of transcription factors in tomato provide hints of unique regulatory networks during fruit ripening. Plant Signaling & Behavior 7, 1639–1647 (2012).

Tohge, T. & Fernie, A. R. Annotation of plant gene function via combined genomics, metabolomics and informatics. Journal of visualized experiments e3487 (2012). doi:10.3791/3487

Toubiana, D., Semel, Y., Tohge, T., Beleggia, R., Cattivelli, L., Rosental, L., Nikoloski, Z., Zamir, D., Fernie, A. R. & Fait, A. Metabolic Profiling of a Mapping Population Exposes New Insights in the Regulation of Seed Metabolism and Seed, Fruit, and Plant Relations. PLoS Genetics 8, e1002612 (2012).

Wu, A., Allu, A. D., Garapati, P., Siddiqui, H., Dortay, H., Zanor, M. I., Asensi-Fabado, M. A., Munne-Bosch, S., Antonio, C., Tohge, T., Fernie, A. R., Kaufmann, K., Xue, G. P., Mueller-Roeber, B. & Balazadeh, S. JUNGBRUNNEN1, a reactive oxygen species-responsive NAC transcription factor, regulates longevity in Arabidopsis. The Plant Cell 24, 482–506 (2012).