Publications of W. X. Schulze

Apel, W., Schulze, W. X. & Bock, R. Identification of protein stability determinants in chloroplasts. Plant Journal 63, 636–650 (2010).

Durek, P., Schmidt, R., Heazlewood, J. L., Jones, A., MacLean, D., Nagel, A., Kersten, B. & Schulze, W. X. PhosPhAt: the Arabidopsis thaliana phosphorylation site database. An update. Nucleic Acids Research 38, D828–D834 (2010).

Keinath, N. F., Kierszniowska, S., Lorek, J., Bourdais, G., Kessler, S. A., Shimosato-Asano, H., Grossniklaus, U., Schulze, W. X., Robatzek, S. & Panstruga, R. PAMP (pathogen-associated molecular pattern)-induced changes in plasma membrane compartmentalization reveal novel components of plant immunity. Journal of Biological Chemistry 285, 39140–39149 (2010).

Riano-Pachon, D. M., Kleessen, S., Neigenfind, Durek, P., Weber, E., Engelsberger, W. R., Walther, D., Selbig, J., Schulze, W. X. & Kersten, B. Proteome-wide survey of phosphorylation patterns affected by nuclear DNA polymorphisms in Arabidopsis thaliana. BMC Genomics 11, 411 (2010).

Schulze, W. X. & Engelsberger, W. R. Mechanismen der Nährstofferkennung in Pflanzen - Die Rolle der Dynamik von Protein-Phosphorylierung. systembiologie.de 2, 36–39 (2010).

Kierszniowska, S., Seiwert, B. & Schulze, W. X. Definition of Arabidopsis Sterol-rich Membrane Microdomains by Differential Treatment with Methyl-beta-cyclodextrin and Quantitative Proteomics. Molecular & Cellular Proteomics 8, 612–623 (2009).

Kierszniowska, S., Walther, D. & Schulze, W. X. Ratio-dependent significance thresholds in reciprocal N-15-labeling experiments as a robust tool in detection of candidate proteins responding to biological treatment. Proteomics 9, 1916–1924 (2009).

Lanquar, V., Loque, D., Hormann, F., Yuan, L. X., Bohner, A., Engelsberger, W. R., Lalonde, S., Schulze, W. X., von Wiren, N. & Frommer, W. B. Feedback Inhibition of Ammonium Uptake by a Phospho-Dependent Allosteric Mechanism in Arabidopsis. Plant Cell 21, 3610–3622 (2009).

Pertl, H., Schulze, W. X. & Obermeyer, G. The Pollen Organelle Membrane Proteome Reveals Highly Spatial-Temporal Dynamics during Germination and Tube Growth of Lily Pollen. Journal of Proteome Research 8, 5142–5152 (2009).

Piques, M., Schulze, W. X., Hoehne, M., Usadel, B., Gibon, Y., Rohwer, J. & Stitt, M. Ribosome and transcript copy numbers, polysome occupancy and enzyme dynamics in Arabidopsis. Molecular Systems Biology 5, 314 (2009).

Heazlewood, J. L., Durek, P., Hummel, J., Selbig, J., Weckwerth, W., Walther, D. & Schulze, W. X. PhosPhAt: a database of phosphorylation sites in Arabidopsis thaliana and a plant-specific phosphorylation site predictor. Nucleic Acids Research 36, D1015–D1021 (2008).

Rogalski, M., Schöttler, M. A., Thiele, W., Schulze, W. X. & Bock, R. Rpl33, a nonessential plastid-encoded ribosomal protein in tobacco, is required under cold stress conditions. The Plant Cell 20, 2221–2237 (2008).

Erba, E. B., Matthiesen, R., Bunkenborg, J., Schulze, W. X., Di Stefano, P., Cabodi, S., Tarone, G., Defilippi, P. & Jensen, O. N. Quantitation of multisite EGF receptor phosphorylation using mass spectrometry and a novel normalization approach. Journal of Proteome Research 6, 2768–2785 (2007).

Niittyla, T., Fuglsang, A. T., Palmgren, M. G., Frommer, W. B. & Schulze, W. X. Temporal analysis of sucrose-induced phosphorylation changes in plasma membrane proteins of Arabidopsis. Molecular & Cellular Proteomics 6, 1711–1726 (2007).

Engelsberger, W. R., Erban, A., Kopka, J. & Schulze, W. X. Metabolic labeling of plant cell cultures with K(15)NO3 as a tool for quantitative analysis of proteins and metabolites. Plant Methods 2, 14 (2006).

Gruhler, A., Schulze, W. X., Matthiesen, R., Mann, M. & Jensen, O. N. Stable isotope labeling of Arabidopsis thaliana cells and quantitative proteomics by mass spectrometry. Molecular & Cellular Proteomics 4, 1697–1709 (2005).

Schulze, W. X. Protein analysis in dissolved organic matter: What proteins from organic debris, soil leachate and surface water can tell us - a perspective. Biogeosciences 2, 75–86 (2005).

Schulze, W. X., Deng, L. & Mann, M. Phosphotyrosine interactome of the ErbB-receptor kinase family. Molecular Systems Biology 1, 2005–2008 (2005).

Schulze, W. X., Gleixner, G., Kaiser, K., Guggenberger, G., Mann, M. & Schulze, E.-D. A proteomic fingerprint of dissolved organic carbon and of soil particles. Oecologia 142, 335–343 (2005).

Schulze, W. X. & Mann, M. A novel proteomic screen for peptide-protein interactions. Journal of Biological Chemistry 279, 10756–10764 (2004).