Publications of M. K. Udvardi

Ruffel, S., Freixes, S., Balzergue, S., Tillard, P., Jeudy, C., Martin-Magniette, M. L., van der Merwe, M. J., Kakar, K., Gouzy, J., Fernie, A. R., Udvardi, M. K., Salon, C., Gojon, A. & Lepetit, M. Systemic signaling of the plant nitrogen status triggers specific transcriptome responses depending on the nitrogen source in Medicago truncatula. Plant Physiology 146, 2020–2035 (2008).

Sanchez, D. H., Lippold, F., Redestig, H., Hannah, M. A., Erban, A., Kraemer, U., Kopka, J. & Udvardi, M. K. Integrative functional genomics of salt acclimatization in the model legume Lotus japonicus. Plant Journal 53, 973–987 (2008).

Sanchez, D. H., Redestig, H., Kraemer, U., Udvardi, M. K. & Kopka, J. Metabolome-ionome-biomass interactions: What can we learn about salt stress by multiparallel phenotyping? Plant Signaling & Behavior 3, 598–600 (2008).

Verdier, J., Kakar, K., Gallardo, K., Le Signor, C., Aubert, G., Schlereth, A., Town, C. D., Udvardi, M. K. & Thompson, R. D. Gene expression profiling of M-truncatula transcription factors identifies putative regulators of grain legume seed filling. Plant Molecular Biology 67, 567–580 (2008).

Hernandez, G., Ramirez, M., Valdes-Lopez, O., Tesfaye, M., Graham, M. A., Czechowski, T., Schlereth, A., Wandrey, M., Erban, A., Cheung, F., Wu, H. C., Lara, M., Town, C. D., Kopka, J., Udvardi, M. K. & Vance, C. P. Phosphorus stress in common bean: Root transcript and metabolic responses. Plant Physiology 144, 752–767 (2007).

Morcuende, R., Bari, R., Gibon, Y., Zheng, W., Pant, B. D., Blaesing, O., Usadel, B., Czechowski, T., Udvardi, M. K., Stitt, M. & Scheible, W.-R. Genome-wide reprogramming of metabolism and regulatory networks of Arabidopsis in response to phosphorus. Plant Cell and Environment 30, 85–112 (2007).

Hoque, M. S., Masle, J., Udvardi, M. K., Ryan, P. R. & Upadhyaya, N. M. Over-expression of the rice OsAMT1-1 gene increases ammonium uptake and content, but impairs growth and development of plants under high ammonium nutrition. Functional Plant Biology 33, 153–163 (2006).

Wood, C. C., Poree, F., Dreyer, I., Koehler, G. J. & Udvardi, M. K. Mechanisms of ammonium transport, accumulation, and retention in ooyctes and yeast cells expressing Arabidopsis AtAMT1; 1. FEBS Letters 580, 3931–3936 (2006).

Czechowski, T., Stitt, M., Altmann, T., Udvardi, M. K. & Scheible, W.-R. Genome-wide identification and testing of superior reference genes for transcript normalization in Arabidopsis. Plant Physiology 139, 5–17 (2005).

Desbrosses, G. G., Kopka, J. & Udvardi, M. K. Lotus japonicus metabolic profiling. Development of gas chromatography-mass spectrometry resources for the study of plant-microbe interactions. Plant Physiology 137, 1302–1318 (2005).

Krusell, L., Krause, K., Ott, T., Desbrosses, G., Kraemer, U., Sato, S., Nakamura, Y., Tabata, S., James, E. K., Sandal, N., Stougaard, J., Kawaguchi, M., Miyamoto, A., Suganuma, N. & Udvardi, M. K. The sulfate transporter SST1 is crucial for symbiotic nitrogen fixation in Lotus japonicus root nodules. Plant Cell 17, 1625–1636 (2005).

McGrath, K. C., Dombrecht, B., Manners, J. M., Schenk, P. M., Edgar, C. I., Maclean, D. J., Scheible, W.-R., Udvardi, M. K. & Kazan, K. Repressor- and activator-type ethylene response factors functioning in jasmonate signaling and disease resistance identified via a genome-wide screen of Arabidopsis transcription factor gene expression. Plant Physiology 139, 949–959 (2005).

Ott, T., van Dongen, J. T., Gunther, C., Krusell, L., Desbrosses, G., Vigeolas, H., Bock, V., Czechowski, T., Geigenberger, P. & Udvardi, M. K. Symbolic leghemoglobins are crucial for nitrogen fixation in legume root nodules but not for general plant growth and development. Current Biology 15, 531–535 (2005).

Czechowski, T., Bari, R. P., Stitt, M., Scheible, W.-R. & Udvardi, M. K. Real-time RT-PCR profiling of over 1400 Arabidopsis transcription factors: unprecedented sensitivity reveals novel root- and shoot-specific genes. Plant Journal 38, 366–379 (2004).

D'Apuzzo, E., Rogato, A., Simon-Rosin, U., El Alaoui, H., Barbulova, A., Betti, M., Dimou, M., Katinakis, P., Marquez, A., Marini, A., Udvardi, M. K. & Chiurazzi, M. Characterization of three functional high-affinity ammonium transporters in Lotus japonicus with differential transcriptional regulation spatial expression. Plant Physiology 134, 1763–1774 (2004).

Desbrosses, G., Kopka, C., Ott, T. & Udvardi, M. K. Lotus japonicus LjKUP is induced late during nodule development and encodes a potassium transporter of the plasma membrane. Molecular Plant-Microbe Interactions 17, 789–797 (2004).

Flemetakis, E., Efrose, R. C., Desbrosses, G., Dimou, M., Delis, C., Aivalakis, G., Udvardi, M. K. & Katinakis, P. Induction and spatial organization of polyamine biosynthesis during nodule development in Lotus japonicus. Molecular Plant-Microbe Interactions 17, 1283–1293 (2004).

Gaude, N., Tippmann, H., Flemetakis, E., Katinakis, P., Udvardi, M. K. & Doermann, P. The galactolipid digalactosyldiacylglycerol accumulates in the peribacteroid membrane of nitrogen-fixing nodules of soybean and Lotus. Journal of Biological Chemistry 279, 34624–34630 (2004).

Scheible, W.-R., Morcuende, R., Czechowski, T., Fritz, C., Osuna, D., Palacios-Rojas, N., Schindelasch, D., Thimm, O., Udvardi, M. K. & Stitt, M. Genome-wide reprogramming of primary and secondary metabolism, protein synthesis, cellular growth processes, and the regulatory infrastructure of Arabidopsis in response to nitrogen. Plant Physiology 136, 2483–2499 (2004).

Wandrey, M., Trevaskis, B., Brewin, N. & Udvardi, M. K. Molecular and cell biology of a family of voltage-dependent anion channel porins in Lotus japonicus. Plant Physiology 134, 182–193 (2004).