Publications of A. Erban

Korn, M., Gärtner, T., Erban, A., Kopka, J., Selbig, J. & Hincha, D. K. Predicting Arabidopsis Freezing Tolerance and Heterosis in Freezing Tolerance from Metabolite Composition. Molecular Plant 3, 224–235 (2010).

Parveen, I., Moorby, J. M., Fraser, M. D., Erban, A. & Kopka, J. Relationship between Grazing Lamb Growth Rate and Blood Plasma Analytes as Profiled by Gas Chromatography with Time-of-Flight Mass Spectrometry (GC-TOF/MS). Journal of Agricultural and Food Chemistry 58, 913–917 (2010).

Sanchez, D. H., Szymanski, J., Erban, A., Udvardi, M. K. & Kopka, J. Mining for robust transcriptional and metabolic responses to long-term salt stress: a case study on the model legume Lotus japonicus. Plant Cell and Environment 33, 468–480 (2010).

Strehmel, N., Praeger, U., Koenig, C., Fehrle, I., Erban, A., Geyer, M., Kopka, J. & van Dongen, J. T. Time course effects on primary metabolism of potato (Solanum tuberosum) tuber tissue after mechanical impact. Postharvest Biology and Technology 56, 109–116 (2010).

Weichert, N., Saalbach, I., Weichert, H., Kohl, S., Erban, A., Kopka, J., Hause, B., Varshney, A., Sreenivasulu, N., Strickert, M., Kumlehn, J., Weschke, W. & Weber, H. Increasing Sucrose Uptake Capacity of Wheat Grains Stimulates Storage Protein Synthesis. Plant Physiology 152, 698–710 (2010).

Allwood, J. W., Erban, A., de Koning, S., Dunn, W. B., Lüdemann, A., Lommen, A., Kay, L., Loscher, R., Kopka, J. & Goodacre, R. Inter-laboratory reproducibility of fast gas chromatography-electron impact-time of flight mass spectrometry (GC-EI-TOF/MS) based plant metabolomics. Metabolomics 5, 479–496 (2009).

Fuehrs, H., Goetze, S., Specht, A., Erban, A., Gallien, S., Heintz, D., van Dorsselaer, A., Kopka, J., Braun, H. P. & Horst, W. J. Characterization of leaf apoplastic peroxidases and metabolites in Vigna unguiculata in response to toxic manganese supply and silicon. Journal of Experimental Botany 60, 1663–1678 (2009).

Hernandez, G., Valdes-Lopez, O., Ramirez, M., Goffard, N., Weiller, G., Aparicio-Fabre, R., Fuentes, S. I., Erban, A., Kopka, J., Udvardi, M. K. & Vance, C. P. Global Changes in the Transcript and Metabolic Profiles during Symbiotic Nitrogen Fixation in Phosphorus-Stressed Common Bean Plants. Plant Physiology 151, 1221–1238 (2009).

Pedreschi, R., Franck, C., Lammertyn, J., Erban, A., Kopka, J., Hertog, M., Verlinden, B. & Nicolai, B. Metabolic profiling of 'Conference' pears under low oxygen stress. Postharvest Biology and Technology 51, 123–130 (2009).

van Dongen, J. T., Frohlich, A., Ramirez-Aguilar, S. J., Schauer, N., Fernie, A. R., Erban, A., Kopka, J., Clark, J., Langer, A. & Geigenberger, P. Transcript and metabolite profiling of the adaptive response to mild decreases in oxygen concentration in the roots of arabidopsis plants. Annals of Botany 103, 269–280 (2009).

Hoehenwarter, W., van Dongen, J. T., Wienkoop, S., Steinfath, M., Hummel, J., Erban, A., Sulpice, R., Regierer, B., Kopka, J., Geigenberger, P. & Weckwerth, W. A rapid approach for phenotype-screening and database independent detection of cSNP/protein polymorphism using mass accuracy precursor alignment. Proteomics 8, 4214–4225 (2008).

Levine, L. H., Kasahara, H., Kopka, J., Erban, A., Fehrle, I., Kaplan, F., Zhao, W., Littell, R. C., Guy, C., Wheeler, R., Sager, J., Mills, A. & Levine, H. G. Physiologic and metabolic responses of wheat seedlings to elevated and super-elevated carbon dioxide. Advances in Space Research 42, 1917–1928 (2008).

Lüdemann, A., Strassburg, K., Erban, A. & Kopka, J. TagFinder for the quantitative analysis of gas chromatography - mass spectrometry (GC-MS)-based metabolite profiling experiments. Bioinformatics 24, 732–737 (2008).

Sanchez, D. H., Lippold, F., Redestig, H., Hannah, M. A., Erban, A., Kraemer, U., Kopka, J. & Udvardi, M. K. Integrative functional genomics of salt acclimatization in the model legume Lotus japonicus. Plant Journal 53, 973–987 (2008).

Strehmel, N., Hummel, J., Erban, A., Strassburg, K. & Kopka, J. Retention index thresholds for compound matching in GC-MS metabolite profiling. Journal of Chromatography B-Analytical Technologies in the Biomedical and Life Sciences 871, 182–190 (2008).

Hannah, M. A., Kraemer, K. M., Geffroy, V., Kopka, J., Blair, M. W., Erban, A., Vallejos, C. E., Heyer, A. G., Sanders, F. E., Millner, P. A. & Pilbeam, D. J. Hybrid weakness controlled by the dosage-dependent lethal (DL) gene system in common bean (Phaseolus vulgaris) is caused by a shoot-derived inhibitory signal leading to salicylic acid-associated root death. New Phytologist 176, 537–549 (2007).

Hernandez, G., Ramirez, M., Valdes-Lopez, O., Tesfaye, M., Graham, M. A., Czechowski, T., Schlereth, A., Wandrey, M., Erban, A., Cheung, F., Wu, H. C., Lara, M., Town, C. D., Kopka, J., Udvardi, M. K. & Vance, C. P. Phosphorus stress in common bean: Root transcript and metabolic responses. Plant Physiology 144, 752–767 (2007).

Kempa, S., Rozhon, W., Samaj, J., Erban, A., Baluska, F., Becker, T., Haselmayer, J., Schleiff, E., Kopka, J., Hirt, H. & Jonak, C. A plastid-localized glycogen synthase kinase 3 modulates stress tolerance and carbohydrate metabolism. Plant Journal 49, 1076–1090 (2007).

Leple, J. C., Dauwe, R., Morreel, K., Storme, V., Lapierre, C., Pollet, B., Naumann, A., Kang, K. Y., Kim, H., Ruel, K., Lefebvre, A., Joseleau, J. P., Grima-Pettenati, J., De Rycke, R., Andersson-Gunneras, S., Erban, A., Fehrle, I., Petit-Conil, M., Kopka, J., Polle, A., Messens, E., Sundberg, B., Mansfield, S. D., Ralph, J., Pilate, G. & Boerjan, W. Downregulation of cinnamoyl-coenzyme a reductase in poplar: multiple-level phenotyping reveals effects on cell wall polymer metabolism and structure. Plant Cell 19, 3669–3691 (2007).

Engelsberger, W. R., Erban, A., Kopka, J. & Schulze, W. X. Metabolic labeling of plant cell cultures with K(15)NO3 as a tool for quantitative analysis of proteins and metabolites. Plant Methods 2, 14 (2006).