Publications of the Group

Bino, R. J.; Hall, R. D.; Fiehn, O.; Kopka, J.; Saito, K.; Draper, J.; Nikolau, B. J.; Mendes, P.; Roessner-Tunali, U.; Beale, M. H. et al.; Trethewey, R. N.; Lange, B. M.; Wurtele, E. S.; Sumner, L. W.: Potential of metabolomics as a functional genomics tool. Trends in Plant Science 9 (9), pp. 418 - 425 (2004)

Jenkins, H.; Hardy, N.; Beckmann, M.; Draper, J.; Smith, A. R.; Taylor, J.; Fiehn, O.; Goodacre, R.; Bino, R. J.; Hall, R. et al.; Kopka, J.; Lane, G. A.; Lange, B. M.; Liu, J. R.; Mendes, P.; Nikolau, B. J.; Oliver, S. G.; Paton, N. W.; Rhee, S.; Roessner-Tunali, U.; Saito, K.; Smedsgaard, J.; Sumner, L. W.; Wang, T.; Walsh, S.; Wurtele, E. S.; Kell, D. B.: A proposed framework for the description of plant metabolomics experiments and their results. Nature Biotechnology 22 (12), pp. 1601 - 1606 (2004)

Kaplan, F.; Kopka, J.; Haskell, D. W.; Zhao, W.; Schiller, K. C.; Gatzke, N.; Sung, D. Y.; Guy, C. L.: Exploring the temperature-stress metabolome of Arabidopsis. Plant Physiology 136 (4), pp. 4159 - 4168 (2004)

Klotke, J.; Kopka, J.; Gatzke, N.; Heyer, A. G.: Impact of soluble sugar concentrations on the acquisition of freezing tolerance in accessions of Arabidopsis thaliana with contrasting cold adaptation - evidence for a role of raffinose in cold acclimation. Plant Cell and Environment 27 (11), pp. 1395 - 1404 (2004)

Luedemann, A.; Weicht, D.; Selbig, J.; Kopka, J.: PaVESy: Pathway visualization and editing system. Bioinformatics 20 (16), pp. 2841 - 2844 (2004)

Steinhauser, D.; Junker, B. H.; Luedemann, A.; Selbig, J.; Kopka, J.: Hypothesis-driven approach to predict transcriptional units from gene expression data. Bioinformatics 20 (12), pp. 1928 - 1939 (2004)

Steinhauser, D.; Usadel, B.; Luedemann, A.; Thimm, O.; Kopka, J.: CSB.DB: a comprehensive systems-biology database. Bioinformatics 20 (18), pp. 3647 - 3651 (2004)

Kopka, J.; Fernie, A. R.; Weckwerth, W.; Gibon, Y.; Stitt, M.: Metabolite profiling in plant biology: platforms and destinations. Genome Biology 5 (6), p. 109 (2004)

Colebatch, G.; Desbrosses, G.; Ott, T.; Krusell, L.; Montanari, O.; Kloska, S.; Kopka, J.; Udvardi, M. K.: Global changes in transcription orchestrate metabolic differentiation during symbiotic nitrogen fixation in Lotus japonicus. Plant Journal 39 (4), pp. 487 - 512 (2004)