Publications of J. Kopka

Allwood, J. W., De Vos, R. C. H., Moing, A., Deborde, C., Erban, A., Kopka, J., Goodacre, R. & Hall, R. D. in Methods in Enzymology (eds. Jameson, D., Verma, M. & Westerhoff, H. V.) 500, 299–336 (Elsevier - Academic Press, 2011).

Kopka, J., Walther, D., Allwood, J. W. & Goodacre, R. in The biology of plant metabolomics (ed. Hall, R. D.) 317–342 (Blackwell-Wiley, 2011). doi:10.1002/9781444339956.ch10

Erban, A., Schauer, N., Fernie, A. R. & Kopka, J. in Metabolomics: Methods and Protocols (ed. Weckwerth, W.) 19–38 (Humana Press Inc., 2007). doi:10.1007/978-1-59745-244-1_2

Hummel, J., Selbig, J., Walther, D. & Kopka, J. in Metabolomics: A Powerful Tool in Systems Biology (eds. Nielsen, J. & Jewett, M.) 75–95 (Springer-Verlag, 2007). doi:10.1007/978-3-540-74719-2

Steinhauser, D. & Kopka, J. in Plant Systems Biology (eds. Baginsky, S. & Fernie, A. R.) 171–194 (Verlag Birkhäuser, 2007). at <http://hdl.handle.net/11858/00-001M-0000-0014-2861-F>

Zuther, E., Koehl, K. I. & Kopka, J. in Advances in molecular breeding toward drought and salt tolerant crops. (eds. Jenks, M. A., Hasegawa, P. M. & Jain, S. M.) 285–315 (Springer-Verlag, 2007). at <http://hdl.handle.net/11858/00-001M-0000-0014-2827-4>

Kopka, J. in Encyclopedic Reference of Genomics and Proteomics in Molecular Medicine (eds. Ganten, D. & Ruckpaul, K.) (Springer-Verlag, 2006). at <http://hdl.handle.net/11858/00-001M-0000-0014-2A31-D>

Kopka, J. in Biotechnology in Agriculture and Forestry (eds. Nagata, T., Lörz, H., Widholm, J. M., Dixon, R. A. & Willmitzer, L.) 3–20 (Springer-Verlag, 2006). at <http://hdl.handle.net/11858/00-001M-0000-0014-2A2C-A>

Udvardi, M. K., Ott, T., Krusell, L., Desbrosses, G., Voroshilova, V., Colebatch, G., Wandrey, M., Montanari, O., Kakar, K., Krause, K., Guenther, C., van Dongen, J. T., Vigeolas, H., Geigenberger, P., Kraemer, U., Kloska, S., Kopka, J., Sato, S., Nakamura, Y., Tabata, S., James, E. K., Kawaguchi, M., Miyamoto, A., Suganuma, N., Sandal, N. & Stougaard, J. in Biology of plant-microbe interactions (eds. Sánchez, F., Quinto, C., López-Lara, I. M. & Geiger, O.) 5, 96–102 (ISMPMI, 2006).

Desbrosses, G., Steinhauser, D., Kopka, J. & Udvardi, M. K. in Lotus japonicus handbook (eds. Marquez, A. J., Stougaard, J., Udvardi, M., Parniske, M., Spaink, H. P., Saalbach, G., Webb, J. S. & Chiurazzi, M.) 165–174 (Kluwer, 2005). at <http://hdl.handle.net/11858/00-001M-0000-0014-2BF8-5>

Rohloff, J., Bones, A. M., Winge, P., Jorstad, T. S., Kopka, J., Erban, A., Bones, A. M., Sparstad, T., Wilson, R. C., Randall, S. K., Davik, J. & Alsheikh, M. Metabolic, Transcriptional and Proteomic Profiling of Cold Response in Fragaria vesca. VI INTERNATIONAL STRAWBERRY SYMPOSIUM 785–788 (2009). at <http://hdl.handle.net/11858/00-001M-0000-0014-61EA-D>

Glaubitz, U., Erban, A., Kopka, J., Hincha, D. K. & Zuther, E. Metabolite Profiling Reveals Sensitivity-Dependent Metabolic Shifts in Rice (Oryza Sativa L.) Cultivars under High Night Temperature Stress. in Agriculture and Climate Change - Adapting Crops to increased uncertainty (Agri 2015) 72–72 (2015). doi:10.1016/j.proenv.2015.07.164

Zuther, E., Li, X., Lawas, L. M. F., Malo, R., Glaubitz, U., Erban, A., Mauleon, R., Heuer, S., Kopka, J., Hincha, D. K. & Jagadish, K. S. V. Sugar Starvation of Rice Anthers is a Factor in Reproductive Failure under Heat and Drought Stress, as shown by Metabolite and Transcript Profiling. in Agriculture and Climate Change - Adapting Crops to Increased Uncertainty (Agri 2015) 70–71 (2015). doi:10.1016/j.proenv.2015.07.163

Fuehrs, H., Kopka, J., Braun, H. P. & Horst, W. J. Metabolomic and Proteomic Analysis of Manganese Sensitivity and Tolerance in the Tropical Legume Cowpea (Vigna unguiculata L.). in XVI. International Plant Nutrition Colloquium (ed. Luoma, S. N.) (2009). at <http://hdl.handle.net/11858/00-001M-0000-0014-25E5-5>

Kaplan, F., Sung, D. Y., Haskell, D., Riad, G. S., Popp, M., Amaya, M., LaBoon, A., Kawamura, Y., Tominaga, Y., Kopka, J., Uemura, M., Lee, K.-J., Brecht, J. K. & Guy, C. L. Could Ethanolic Fermentation During Cold Shock Be a Novel Plant Cold Stress Coping Strategy? in PLANT COLD HARDINESS: FROM THE LABORATORY TO THE FIELD 80–90 (CABI PUBLISHING-C A B INT., 2009). doi:10.1079/9781845935139.0080

Birkemeye, C. & Kopka, J. Design of metabolite recovery by variations of the metabolite profiling protocol. in Concepts in Plant Metabolomics 45–69 (2007). doi:10.1007/978-1-4020-5608-6_4

Treves, H., Siemiatkowska, B., Luzarowska, U., Murik, O., Erban, A., Armbruster, U., Brotman, Y., Kopka, J., Rensing, S., Szymanski, J. & Stitt, M. Multi-omics reveals mechanisms of total resistance to extreme illumination of a desert alga. in Phycologia 60, 113–113 (International Phycological Society, 2021).

Jaworski, J. G., Ohlrogge, J. B., Tai, H. Y., Kopka, J. & Post-Beittenmiller, D. Analysis of Fatty-Acid Biosynthesis in Transgenic Plants with Modified Oil Composition. in Journal of Cellular Biochemistry 56, 82–82 (1994).

Kopka, J., Robers, M. & Spener, F. Purification and Characterization of 2 Acyl Carrier Proteins from Cuphea-Lanceolata Seeds. in Biological Chemistry Hoppe-Seyler 372, 534–535 (1991).

Kopka, J. & Steinhauser, D. Cellular inventory: A joint initiative of the comprehensive systems-biology database [CSB. DB], the Golm Metabolite Database [GMD] and MapMan. Biological Letter 42, 106 (2005).