Publications of M. Schroda

Neupert, J.; Gallaher, S.D.; Lu, Y.; Strenkert, D.; Segal, N.; Barahimipour, R.; Fitz-Gibbon, S.T.; Schroda, M.; Merchant, S.S.; Bock, R.: Publisher Correction: An epigenetic gene silencing pathway selectively acting on transgenic DNA in the green alga Chlamydomonasis (Nature Communications, (2020), 11, 1, (6269), 10.1038/s41467-020-19983-4). Nature Communications 12 (1), 208 (2021)

Neupert, J.; Gallaher, S.D.; Lu, Y.; Strenkert, D.; Segal, N.; Barahimipour, R.; Fitz-Gibbon, S.T.; Schroda, M.; Merchant, S.S.; Bock, R.: An epigenetic gene silencing pathway selectively acting on transgenic DNA in the green alga Chlamydomonas. Nature Communications 11 (1), 6269 (2020)

Küken, A.; Sommer, F.; Yaneva-Roder, L.; Mackinder, L. C. M.; Höhne, M.; Geimer, S.; Jonikas, M. C.; Schroda, M.; Stitt, M.; Nikoloski, Z. et al.; Mettler, T.: Effects of microcompartmentation on flux distribution and metabolic pools in Chlamydomonas reinhardtii chloroplasts. eLife 7, e37960 (2018)

Mackinder, L. C. M.; Meyer, M. T.; Mettler, T.; Chen, V. K.; Mitchell, M. C.; Caspari, O.; Rosenzweig, E. S. F.; Pallesen, L.; Reeves, G.; Itakura, A. et al.; Roth, R.; Sommer, F.; Geimer, S.; Mühlhaus, T.; Schroda, M.; Goodenough, U.; Stitt, M.; Griffiths, H.; Jonikas, M. C.: A repeat protein links Rubisco to form the eukaryotic carbon-concentrating organelle. Proceedings of the National Academy of Sciences of the United States of America 113 (21), pp. 5958 - 5963 (2016)

Barahimipour, R.; Strenkert, D.; Neupert, J.; Schroda, M.; Merchant, S. S.; Bock, R.: Dissecting the contributions of GC content and codon usage to gene expression in the model alga Chlamydomonas reinhardtii. The Plant Journal 84 (4), pp. 704 - 717 (2015)

Ramundo, S.; Casero, D.; Mühlhaus, T.; Hemme, D.; Sommer, F.; Crevecoeur, M.; Rahire, M.; Schroda, M.; Rusch, J.; Goodenough, U. et al.; Pellegrini, M.; Esther Perez-Perez, M.; Luis Crespo, J.; Schaad, O.; Civic, N.; Rochaix, J. D.: Conditional Depletion of the Chlamydomonas Chloroplast ClpP Protease Activates Nuclear Genes Involved in Autophagy and Plastid Protein Quality Control. Plant Cell 26 (5), pp. 2201 - 2222 (2014)

Hemme, D.; Veyel, D.; Mühlhaus, T.; Sommer, F.; Jueppner, J.; Unger, A.-K.; Sandmann, M.; Fehrle, I.; Schönfelder, S.; Steup, M. et al.; Geimer, S.; Kopka, J.; Giavalisco, P.; Schroda, M.: Systems-Wide Analysis of Acclimation Responses to Long-Term Heat Stress and Recovery in the Photosynthetic Model Organism Chlamydomonas reinhardtii. The Plant Cell 26 (11), pp. 4270 - 4297 (2014)

Mettler, T.; Mühlhaus, T.; Hemme, D.; Schöttler, M. A.; Rupprecht, J.; Idoine, A.; Veyel, D.; Pal, S. K.; Yaneva-Roder, L.; Winck, F. V. et al.; Sommer, F.; Vosloh, D.; Seiwert, B.; Erban, A.; Burgos, A.; Arvidsson, S.; Schönfelder, S.; Arnold, A.; Günther, M.; Krause, U.; Lohse, M.; Kopka, J.; Nikoloski, Z.; Mueller-Roeber, B.; Willmitzer, L.; Bock, R.; Schroda, M.; Stitt, M.: Systems Analysis of the Response of Photosynthesis, Metabolism, and Growth to an Increase in Irradiance in the Photosynthetic Model Organism Chlamydomonas reinhardtii. The Plant Cell 26 (6), pp. 2310 - 2350 (2014)

Schmollinger, S.; Mühlhaus, T.; Boyle, N. R.; Blaby, I. K.; Casero, D.; Mettler, T.; Moseley, J. L.; Kropat, J.; Sommer, F.; Strenkert, D. et al.; Hemme, D.; Pellegrini, M.; Grossman, A. R.; Stitt, M.; Schroda, M.; Merchant, S. S.: Nitrogen‐Sparing Mechanisms in Chlamydomonas Affect the Transcriptome, the Proteome, and Photosynthetic Metabolism. The Plant Cell 26 (4), pp. 1410 - 1435 (2014)

Strenkert, D.; Schmollinger, S.; Schroda, M.: Heat shock factor 1 counteracts epigenetic silencing of nuclear transgenes in Chlamydomonas reinhardtii. Nucleic Acids Research 41 (10), pp. 5273 - 5289 (2013)

Schmollinger, S.; Schulz-Raffelt, M.; Strenkert, D.; Veyel, D.; Vallon, O.; Schroda, M.: Dissecting the Heat Stress Response in Chlamydomonas by Pharmaceutical and RNAi Approaches Reveals Conserved and Novel Aspects. Molecular Plant 6 (6), pp. 1795 - 1813 (2013)

Schmollinger, S.; Strenkert, D.; Offeddu, V.; Nordhues, A.; Sommer, F.; Schroda, M.: A Protocol for the Identification of Protein-protein Interactions Based on 15N Metabolic Labeling, Immunoprecipitation, Quantitative Mass Spectrometry and Affinity Modulation. Journal of Visualized Experiments: JoVE (67), 4083 (2012)

Nordhues, A.; Schöttler, M. A.; Unger, A. K.; Geimer, S.; Schoenfelder, S.; Schmollinger, S.; Ruetgers, M.; Finazzi, G.; Soppa, B.; Sommer, F. et al.; Muehlhaus, T.; Roach, T.; Krieger-Liszkay, A.; Lokstein , H.; Crespo, J. L.; Schroda, M.: Evidence for a Role of VIPP1 in the Structural Organization of the Photosynthetic Apparatus in Chlamydomonas. The Plant Cell 24 (2), pp. 637 - 659 (2012)

Muehlhaus, T.; Weiss, J.; Hemme, D.; Sommer, F.; Schroda, M.: Quantitative shotgun proteomics using a uniform 15N-labeled standard to monitor proteome dynamics in time course experiments reveals new insights into the heat stress response of Chlamydomonas reinhardtii. Molecular and Cellular Proteomics 10 (9), p. M110 004739 (2011)

Strenkert, D.; Schmollinger, S.; Schroda, M.: Protocol: methodology for chromatin immunoprecipitation (ChIP) in Chlamydomonas reinhardtii. Plant Methods 7, p. 35 (2011)

Strenkert, D.; Schmollinger, S.; Sommer, F.; Schulz-Raffelt, M.; Schroda, M.: Transcription Factor-Dependent Chromatin Remodeling at Heat Shock and Copper-Responsive Promoters in Chlamydomonas reinhardtii. Plant Cell 23 (6), pp. 2285 - 2301 (2011)

Dorn, K. V.; Willmund, F.; Schwarz, C.; Henselmann, C.; Pohl, T.; Hess, B.; Veyel, D.; Usadel, B.; Friedrich, T.; Nickelsen, J. et al.; Schroda, M.: Chloroplast DnaJ-like proteins 3 and 4 (CDJ3/4) from Chlamydomonas reinhardtii contain redox-active Fe-S clusters and interact with stromal HSP70B. Biochemical Journal 427 (2), pp. 205 - 215 (2010)

Meinecke, L.; Alawady, A.; Schroda, M.; Willows, R.; Kobayashi, M. C.; Niyogi, K. K.; Grimm, B.; Beck, C. F.: Chlorophyll-deficient mutants of Chlamydomonas reinhardtii that accumulate magnesium protoporphyrin IX. Plant Molecular Biology 72 (6), pp. 643 - 658 (2010)

Schmollinger, S.; Strenkert, D.; Schroda, M.: An inducible artificial microRNA system for Chlamydomonas reinhardtii confirms a key role for heat shock factor 1 in regulating thermotolerance. Current Genetics 56 (4), pp. 383 - 389 (2010)

Heide, H.; Nordhues, A.; Drepper, F.; Nick, S.; Schulz-Raffelt, M.; Haehnel, W.; Schroda, M.: Application of quantitative immunoprecipitation combined with knockdown and cross-linking to Chlamydomonas reveals the presence of vesicle-inducing protein in plastids 1 in a common complex with chloroplast HSP90C. Proteomics 9 (11), pp. 3079 - 3089 (2009)