Muschak, M.; Willmitzer, L.; Fisahn, J.: Gas exchange and environmental parameters at FBPase antisense potatoes. In: XIth International Congress on Photosynthesis - Mechanisms and Effects, pp. 3475 - 3478 (Ed. Garab, G.). XIth International Congress on Photosynthesis - Mechanisms and Effects, Budapest, Hungary. Kluwer Academic Pub (1998)

Riesmeier, J.; Kossmann, J.; Trethewey, R.; Heyer, A. G.; Landschuetze, V.; Willmitzer, L.: Production of novel polymers in transgenic plants. In: Symposium H on Biodegradable Polymers and Macromolecules, at the E-MRS 97/ICAM 97 Conference, pp. 383 - 386. Symposium H on Biodegradable Polymers and Macromolecules, at the E-MRS 97/ICAM 97 Conference, STRASBOURG, FRANCE. (1998)

Kossmann, J.; Buettcher, V.; Abel, G. J. W.; Duwenig, E.; Emmermann, M.; Frohberg, C.; Lloyd, J. R.; Lorberth, R.; Springer, F.; Welsh, T. et al.; Willmitzer, L.: Starch biosynthesis and modification of starch structure in transgenic plants. In: Macromolecular Symposia, pp. 29 - 38. Macromolecular Symposia. (1997)

Muschak, M.; Hoffmann-Benning, S.; Fuss, H.; Kossmann, J.; Willmitzer, L.; Fisahn, J.: Gas exchange and ultrastructural analysis of transgenic potato plants expressing mRNA antisense construct targeted to the cp-fructose-1,6-bisphosphate phosphatase. In: 9th Workshop on Photosynthesis, pp. 455 - 465. 9th Workshop on Photosynthesis, WUSTERHAUSEN, GERMANY. (1997)

Fisahn, J.; Rehm, J.; Riesmeier, J.; Kossmann, J.; Willmitzer, L.: Regulation of photosynthetic activity and of stomatal aperture by the chloroplastic fructose bisphosphatase and by a sucrose transport protein involved in phloem loading. In: Xth International Photosynthesis Congress, pp. 641 - 646 (Ed. Mathis, P.). Xth International Photosynthesis Congress, MONTPELLIER, FRANCE. Kluwer Academic Pub (1995)

Kossmann, J.; Mueller-Roeber, B.; Riesmeier, J.; Frommer, W. B.; Sonnewald, U.; Willmitzer, L.: Transgenic plants as a tool to analyze carbohydrate metabolism. In: Sucrose Metabolism, Biochemistry, Physiology and Molecular Biology, pp. 100 - 106. Sucrose Metabolism, Biochemistry, Physiology and Molecular Biology. (1995)

Hincha, D. K.; Schulz, E.; Thalhammer, A.; Tohge, T.; Sulpice, R.; Fernie, A. R.; Zuther, E.: The Role of Secondary Metabolites and COR Proteins in Plant Freezing Tolerance. In In Vitro Cellular & Developmental Biology-Animal, 50, p. S13 - S13. Tissue Culture Association, Columbia, MD (2014)

van der Merwe, M. J.; Osorio, S.; Moritz, T.; Nunes-Nesi, A.; Fernie, A. R.: The role and regulation of the tricarboxylic acid cycle in Solanum lycopersicum roots. In South African Journal of Botany, 75 (2), p. 424 - 424. (2009)

Nunes-Nesi, A.: Upregulation of photosynthetic performance and growth as a consequence of a decreased TCA cycle enzymes activity in genetic manipulated tomato plants. In Photosynthesis Research, 91 (2-3), pp. 247 - 248. (2007)

Carrari, F.; Fernie, A. R.: Characterizing the metabolic regulation that underlies tomato fruit development. In Comparative Biochemistry and Physiology a-Molecular & Integrative Physiology, 141 (3), p. S297 - S297. (2005)

Ishizaki, K.; Larson, T. A.; Schauer, N.; Fernie, A. R.; Graham, I. A.; Leaver, C. J.: The critical role of Arabidopsis electron-transfer flavoprotein:ubiquinone oxidoreductase during dark-induced starvation. In Plant Cell, 17 (9), pp. 2587 - 2600. (2005)

Urbanczyk-Wochniak, E.; Willmitzer, L.; Fernie, A. R.: mRNA Analysis of Plant Metabolic Regulation: Comparison of Transcript and Metabolic Complements of Developing Plant Tissues. In Acta Physiologiae Plantarum, 26 (3), p. 55 - 55. (2004)

Hoffmann-Benning, S.; Wegener, C.; Willmitzer, L.; Fisahn, J.: The role of the cell wall for growth and development in transgenic plants overexpressing pectin methylesterase and pectate lyase. In Plant Physiology, 114 (3), p. 100 - 100. (1997)

Muschak, M.; Pachepsky, L. B.; Willmitzer, L.; Fisahn, J.: The influence of stomatal density on leaf gas exchange. In Plant Physiology, 114 (3), p. 218 - 218. (1997)

Willmitzer, L.: Transgenic plants altered in carbohydrate metabolism: Biochemical and molecular analysis. In Faseb Journal, 11 (9), p. A868 - A868. (1997)

Duwenig, E.; Steup, M.; Willmitzer, L.; Kossmann, J.: Role of starch phosphorylase in potato: The functional analysis of an enigmatic enzyme. In Plant Physiology, 111 (2), p. 92 - 92. (1996)

Hoffmann-Benning, S.; Wegener, C.; Willmitzer, L.; Fisahn, J.: Use of transgenic plants to analyse the role of pectin components during growth. In Plant Physiology, 111 (2), p. 136 - 136. (1996)

Muschak, M.; Willmitzer, L.; Fisahn, J.: cp-FBPase antisense potatoes exhibited reduced levels in ABA. In Plant Physiology, 111 (2), p. 24 - 24. (1996)

Trethewey, R.; Geigenberger, P.; Hajirezaei, M.-R.; Riesmeier, J. W.; Sonnewald, U.; Stitt, M.; Willmitzer, L.: Glucokinase activity in potato tubers: A key step for the regulation of metabolism. In Plant Physiology, 111 (2), p. 798 - 798. (1996)

Fernie, A. R.: Interview with Alisdair R. Fernie. (2014)

Fernie, A. R.; Aharoni, A.; Willmitzer, L.; Stitt, M.; Tohge, T.; Kopka, J.; Carroll, A. J.; Saito, K.; Fraser, P. D.; DeLuca, V.: Recommendations for Reporting Metabolite Data, The Plant Cell 23, pp. 2477 - 2482 (2011)

Fernie, A. R.; Hashida, S.-N.; Yoshimura, K.; Gakière, B.; Mou, Z.; Pétriacq, P.: Editorial: NAD Metabolism and Signaling in Plants. Frontiers in Plant Science 11, 146 (2020)

Fernie, A. R.; Wen, W.: Editorial overview: Evolution of metabolic diversity. Current Opinion in Plant Biology 55, pp. A1 - A4 (2020)

Fernie, A. R.: Seeing is believing: the three-way division of labor in the photosynthetic thylakoid membrane. The Plant Journal 97 (3), pp. 410 - 411 (2019)

Fernie, A. R.: Making sense of the complex role of the mitochondria in mediating the plant touch response. The Plant Journal 97 (4), pp. 621 - 622 (2019)

Fernie, A. R.; Sweetlove, L.: The Plant Journal actively supports Open Science and data transparency. The Plant Journal 97 (3), p. 409 - 409 (2019)

Sweetlove, L. J.; Aharoni, A.; Fernie, A. R.: Introducing TPJ Fellowships for early stage Principal Investigators. The Plant Journal 100 (3), p. 435 - 435 (2019)

Kopka, J.; Fernie, A. R.: Editorial overview: Plant synthetic and systems biology. Current Opinion in Biotechnology 49, pp. viii - xi (2018)

Fernie, A. R.; Pichersky, E.: Focus Issue on Metabolism: Metabolites, Metabolites Everywhere. Plant Physiology 169 (3), pp. 1421 - 1423 (2015)

Batushansky, A.; Kirma, M.; Grillich, N.; Toubiana, D.; Pham, P. A.; Balbo, I.; Fromm, H.; Galili, G.; Fernie, A. R.; Fait, A.: Combined Transcriptomics and Metabolomics of Arabidopsis thaliana Seedlings Exposed to Exogenous GABA Suggest Its Role in Plants Is Predominantly Metabolic. Molecular Plant 7 (6), pp. 1065 - 1068 (2014)

Fernie, A. R.: Editorial overview - the Computational approaches in aid of advancing understanding in Plant Physiology. Frontiers in Plant Science 2, p. 78 (2011)

Gupta, K. J.; Hincha, D. K.; Mur, L. A. J.: NO way to treat a cold. New Phytologist 189 (2), pp. 360 - 363 (2011)

Kopka, J.; Fernie, A. R.; Weckwerth, W.; Gibon, Y.; Stitt, M.: Metabolite profiling in plant biology: platforms and destinations. Genome Biology 5 (6), p. 109 (2004)

Trethewey, R. N.; Krotzky, A. J.; Willmitzer, L.: Metabolic profiling: a Rosetta Stone for genomics? Current Opinion in Plant Biology 2 (2), pp. 83 - 85 (1999)

Willmitzer, L.: Plant biotechnology: output traits - the second generation of plant biotechnology products is gaining momentum - Overview. Current Opinion in Biotechnology 10 (2), pp. 161 - 162 (1999)

de Oliveira, H.O.; Siqueira, J.A.; Medeiros, D.B.; Fernie, A. R.; Nunes-Nesi, A.; Araújo, W.L.: Harnessing the dynamics of plant organic acids metabolism following abiotic stresses. Plant Physiology and Biochemistry 220, 109465 (2025)

Schwenkert, S.; Fernie, A. R.; Geigenberger, P.; Leister, D.; Möhlmann, T.; Naranjo, B.; Neuhaus, H. E.: Chloroplasts are key players to cope with light and temperature stress. Trends in Plant Science 27 (6), pp. 577 - 587 (2022)

Sreenivasulu, N.; Zhang, C.; Tiozon, R.J.N.; Liu, Q.: Post-genomics revolution in the design of premium quality rice in a high-yielding background to meet consumer demands in the 21st century. Plant Communications 3 (3), 100271 (2022)

Liu, Y.; Fernie, A. R.; Tohge, T.: Diversification of Chemical Structures of Methoxylated Flavonoids and Genes Encoding Flavonoid-O-Methyltransferases. Plants 11 (4), 564 (2022)

Gupta, K.J.; Kaladhar, V.C.; Fitzpatrick, T.B.; Fernie, A. R.; Møller, I.M.; Loake, G.J.: Nitric oxide regulation of plant metabolism. Molecular Plant 15 (2), pp. 228 - 242 (2022)

Tiozon, R.J.N.; Sartagoda, K. J. D.; Fernie, A. R.; Sreenivasulu, N.: The nutritional profile and human health benefit of pigmented rice and the impact of post-harvest processes and product development on the nutritional components: A review. Critical Reviews in Food Science and Nutrition 63 (19), pp. 3867 - 3894 (2021)

Zhang, Y.; Fernie, A. R.: Stable and temporary enzyme complexes and metabolons involved in energy and redox metabolism. ANTIOXIDANTS & REDOX SIGNALING 35 (10), pp. 788 - 807 (2021)

Medeiros, D.B.; Aarabi, F.; Rivas f; Fernie, A. R.: The knowns and unknowns of intracellular partitioning of carbon and nitrogen, with focus on the organic acid-mediated interplay between mitochondrion and chloroplast. Journal of Plant Physiology 266, 153521 (2021)

Wu, T.; Kerbler, S. M.; Fernie, A. R.; Zhang, Y.: Plant cell cultures as heterologous bio-factories for secondary metabolite production. Plant Communications 2, 100235 (2021)

Maeda, H. A.; Fernie, A. R.: Evolutionary History of Plant Metabolism. Annu. Rev. Plant Biol. 72, pp. 185 - 216 (2021)

Alseekh, S.; Scossa, F.; Wen, W.; Luo, J.; Yan, J.; Beleggia, R.; Klee, H. J.; Huang, S.; Papa, R.; Fernie, A. R.: Domestication of Crop Metabolomes: Desired and Unintended Consequences. Trends in Plant Science 26 (6), pp. 650 - 661 (2021)

Medeiros, D.B.; Brotman, Y.; Fernie, A. R.: The utility of metabolomics as a tool to inform maize biology. Plant Communications 2 (4), 100187 (2021)

Zhang, Y.; Fernie, A. R.: Metabolons, Enzyme-Enzyme Assemblies that Mediate Substrate Channeling, and Their Roles in Plant Metabolism. Plant Communications 2 (1), 100081 (2021)

Borghi, M.; Fernie, A. R.: Outstanding questions in flower metabolism. The Plant Journal 103 (4), pp. 1275 - 1288 (2020)

Aarabi, F.; Naake, T.; Fernie, A. R.; Hoefgen, R.: Coordinating Sulfur Pools under Sulfate Deprivation. Trends in Plant Science 25 (12), pp. 1227 - 1239 (2020)