Publications of the Group

Allen, A. E.; LaRoche, J.; Maheswari, U.; Lommer, M.; Schauer, N.; Lopez, P. J.; Finazzi, G.; Fernie, A. R.; Bowler, C.: Whole-cell response of the pennate diatom Phaeodactylum tricornutum to iron starvation. Proceedings of the National Academy of Sciences of the United States of America 105 (30), pp. 10438 - 10443 (2008)

Araujo, W. L.; Nunes-Nesi, A.; Trenkamp, S.; Bunik, V. I.; Fernie, A. R.: Inhibition of 2-Oxoglutarate Dehydrogenase in Potato Tuber Suggests the Enzyme Is Limiting for Respiration and Confirms Its Importance in Nitrogen Assimilation. Plant Physiology 148 (4), pp. 1782 - 1796 (2008)

Bermudez, L.; Urias, U.; Milstein, D.; Kamenetzky, L.; Asis, R.; Fernie, A. R.; van Sluys, M. A.; Carrari, F.; Rossi, M.: A candidate gene survey of quantitative trait loci affecting chemical composition in tomato fruit. Journal of Experimental Botany 59 (10), pp. 2875 - 2890 (2008)

Boettcher, C.; Centeno, D.; Freitag, J.; Hoefgen, R.; Koehl, K. I.; Kopka, J.; Kroymann, J.; Matros, A.; Mock, H.-P.; Neumann, S. et al.; Pfalz, M.; von Roepenack-Lahaye, E.; Schauer, N.; Trenkamp, S.; Zurbriggen, M.; Fernie, A. R.: Teaching (and learning from) metabolomics: The 2006 PlantMetaNet ETNA Metabolomics Research School. Physiologia Plantarum 132 (2), pp. 136 - 149 (2008)

Chen, S.; Hajirezaei, M.-R.; Zanor, M. I.; Hornyik, C.; Debast, S.; Lacomme, C.; Fernie, A. R.; Sonnewald, U.; Bornke, F.: RNA interference-mediated repression of sucrose-phosphatase in transgenic potato tubers (Solanum tuberosum) strongly affects the hexose-to-sucrose ratio upon cold storage with only minor effects on total soluble carbohydrate accumulation. Plant, Cell and Environment 31 (1), pp. 165 - 176 (2008)

DaMatta, F. M.; Cunha, R. L.; Antunes, W. C.; Martins, S. C. V.; Araujo, W. L.; Fernie, A. R.; Moraes, G. A. B. K.: In field-grown coffee trees source-sink manipulation alters photosynthetic rates, independently of carbon metabolism, via alterations in stomatal function. New Phytologist 178 (2), pp. 348 - 357 (2008)

Fait, A.; Hanhineva, K.; Beleggia, R.; Dai, N.; Rogachev, I.; Nikiforova, V. J.; Fernie, A. R.; Aharoni, A.: Reconfiguration of the achene and receptacle metabolic networks during strawberry fruit development. Plant Physiology 148 (2), pp. 730 - 750 (2008)

Farre, E. M.; Fernie, A. R.; Willmitzer, L.: Analysis of subcellular metabolite levels of potato tubers (Solanum tuberosum) displaying alterations in cellular or extracellular sucrose metabolism. Metabolomics 4 (2), pp. 161 - 170 (2008)

Fettke, J.; Nunes-Nesi, A.; Alpers, J.; Szkop, M.; Fernie, A. R.; Steup, M.: Alterations in Cytosolic Glucose-Phosphate Metabolism Affect Structural Features and Biochemical Properties of Starch-Related Heteroglycans. Plant Physiology 148 (3), pp. 1614 - 1629 (2008)

Mazzella, M. A.; Zanor, M. I.; Fernie, A. R.; Casal, J. J.: Metabolic responses to red/far-red ratio and ontogeny show poor correlation with the growth rate of sunflower stems. Journal of Experimental Botany 59 (9), pp. 2469 - 2477 (2008)

Morgan, M. J.; Lehmann, M.; Schwarzlander, M.; Baxter, C. J.; Sienkiewicz-Porzucek, A.; Williams, T. C. R.; Schauer, N.; Fernie, A. R.; Fricker, M. D.; Ratcliffe, R. G. et al.; Sweetlove, L. J.; Finkemeier, I.: Decrease in manganese superoxide dismutase leads to reduced root growth and affects tricarboxylic acid cycle flux and mitochondrial redox homeostasis. Plant Physiology 147 (1), pp. 101 - 114 (2008)

Nunes-Nesi, A.; Sulpice, R.; Gibon, Y.; Fernie, A. R.: The enigmatic contribution of mitochondrial function in photosynthesis. Journal of Experimental Botany 59 (7), pp. 1675 - 1684 (2008)

Oliver, S. N.; Lunn, J. E.; Urbanczyk-Wochniak, E.; Lytovchenko, A.; van Dongen, J. T.; Faix, B.; Schmalzlin, E.; Fernie, A. R.; Geigenberger, P.: Decreased Expression of Cytosolic Pyruvate Kinase in Potato Tubers Leads to a Decline in Pyruvate Resulting in an in Vivo Repression of the Alternative Oxidase. Plant Physiology 148 (3), pp. 1640 - 1654 (2008)

Oliver, S. N.; Tiessen, A.; Fernie, A. R.; Geigenberger, P.: Decreased expression of plastidial adenylate kinase in potato tubers results in an enhanced rate of respiration and a stimulation of starch synthesis that is attributable to post-translational redox-activation of ADP-glucose pyrophosphorylase. Journal of Experimental Botany 59 (2), pp. 315 - 325 (2008)

Palmieri, L.; Santoro, A.; Carrari, F.; Blanco, E.; Nunes-Nesi, A.; Arrigoni, R.; Genchi, F.; Fernie, A. R.; Palmieri, F.: Identification and Characterization of ADNT1, a Novel Mitochondrial Adenine Nucleotide Transporter from Arabidopsis. Plant Physiology 148 (4), pp. 1797 - 1808 (2008)

Riewe, D.; Grosman, L.; Fernie, A. R.; Wucke, C.; Geigenberger, P.: The potato-specific apyrase is apoplastically localized and has influence on gene expression, growth, and development. Plant Physiology 147 (3), pp. 1092 - 1109 (2008)

Riewe, D.; Grosman, L.; Fernie, A. R.; Zauber, H.; Wucke, C.; Geigenberger, P.: A Cell Wall-Bound Adenosine Nucleosidase is Involved in the Salvage of Extracellular ATP in Solanum tuberosum. Plant and Cell Physiology 49 (10), pp. 1572 - 1579 (2008)

Riewe, D.; Grosman, L.; Zauber, H.; Wucke, C.; Fernie, A. R.; Geigenberger, P.: Metabolic and developmental adaptations of growing potato tubers in response to specific manipulations of the adenylate energy status. Plant Physiology 146 (4), pp. 1579 - 1598 (2008)

Ruffel, S.; Freixes, S.; Balzergue, S.; Tillard, P.; Jeudy, C.; Martin-Magniette, M. L.; van der Merwe, M. J.; Kakar, K.; Gouzy, J.; Fernie, A. R. et al.; Udvardi, M. K.; Salon, C.; Gojon, A.; Lepetit, M.: Systemic signaling of the plant nitrogen status triggers specific transcriptome responses depending on the nitrogen source in Medicago truncatula. Plant Physiology 146 (4), pp. 2020 - 2035 (2008)

Schauer, N.; Semel, Y.; Balbo, I.; Steinfath, M.; Repsilber, D.; Selbig, J.; Pleban, T.; Zamir, D.; Fernie, A. R.: Mode of inheritance of primary metabolic traits in tomato. The Plant Cell 20 (3), pp. 509 - 523 (2008)

Sienkiewicz-Porzucek, A.; Nunes-Nesi, A.; Sulpice, R.; Lisec, J.; Centeno, D. C.; Carillo, P.; Leisse, A.; Urbanczyk-Wochniak, E.; Fernie, A. R.: Mild reductions in mitochondrial citrate synthase activity result in a compromised nitrate assimilation and reduced leaf pigmentation but have no effect on photosynthetic performance or growth. Plant Physiology 147 (1), pp. 115 - 127 (2008)

Skirycz, A.; Radziejwoski, A.; Busch, W.; Hannah, M. A.; Czeszejko, J.; Kwasniewski, M.; Zanor, M. I.; Lohmann, J. U.; De Veylder, L.; Witt, I. et al.; Mueller-Roeber, B.: The DOF transcription factor OBP1 is involved in cell cycle regulation in Arabidopsis thaliana. The Plant Journal 56 (5), pp. 779 - 792 (2008)

Timm, S.; Nunes-Nesi, A.; Pamik, T.; Morgenthal, K.; Wienkoop, S.; Keerberg, O.; Weckwerth, W.; Kleczkowski, L. A.; Fernie, A. R.; Bauwe, H.: A Cytosolic Pathway for the Conversion of Hydroxypyruvate to Glycerate during Photorespiration in Arabidopsis. The Plant Cell 20 (10), pp. 2848 - 2859 (2008)

Weigelt, K.; Kuester, H.; Radchuk, R.; Mueller, M.; Weichert, H.; Fait, A.; Fernie, A. R.; Saalbach, I.; Weber, H.: Increasing amino acid supply in pea embryos reveals specific interactions of N and C metabolism, and highlights the importance of mitochondrial metabolism. The Plant Journal 55 (6), pp. 909 - 926 (2008)

Centeno, D. C.; Oliver, S. N.; Nunes-Nesi, A.; Geigenberger, P.; Machado, D. N.; Loureiro, M. E.; Silva, M. A. P.; Fernie, A. R.: Metabolic regulation of pathways of carbohydrate oxidation in potato (Solanum tuberosum) tubers. Physiologia Plantarum 133 (4), pp. 744 - 754 (2008)

Fait, A.; Fromm, H.; Walther, D.; Galili, G.; Fernie, A. R.: Highway or byway: the metabolic role of the GABA shunt in plants. Trends in Plant Science 13 (1), pp. 14 - 19 (2008)

Schippers, J. H. M.; Nunes-Nesi, A.; Apetrei, R.; Hille, J.; Fernie, A. R.; Dijkwel, P. P.: The Arabidopsis onset of leaf death5 Mutation of Quinolinate Synthase Affects Nicotinamide Adenine Dinucleotide Biosynthesis and Causes Early Ageing. The Plant Cell 20 (10), pp. 2909 - 2925 (2008)

Sweetlove, L. J.; Fell, D.; Fernie, A. R.: Getting to grips with the plant metabolic network. Biochemical Journal 409 (1), pp. 27 - 41 (2008)