Publications of the Group

Alseekh, S.; Bermudez, L.; de Haro, L. A.; Fernie, A. R.; Carrari, F.: Crop metabolomics: from diagnostics to assisted breeding. Metabolomics 14 (11), 148 (2018)

Kumar, P.; Garrido, E.; Zhao, K.; Zheng, Y.; Alseekh, S.; Vargas-Ortiz, E.; Fernie, A. R.; Fei, Z.; Poveda, K.; Jander, G.: Tecia solanivora infestation increases tuber starch accumulation in Pastusa Suprema potatoes. Journal of Integrative Plant Biology 60 (11), pp. 1083 - 1096 (2018)

Alhajturki, D.; Muralidharan, S.; Nurmi, M.; Rowan, B. A.; Lunn, J. E.; Boldt, H.; Salem, M.A.; Alseekh, S.; Jorzig, C.; Feil, R. et al.; Giavalisco, P.; Fernie, A. R.; Weigel, D.; Laitinen, R.: Dose-dependent interactions between two loci trigger altered shoot growth in BG-5 × Krotzenburg-0 (Kro-0) hybrids of Arabidopsis thaliana. New Phytologist 217 (1), pp. 392 - 406 (2018)

Alseekh, S.; Fernie, A. R.: Metabolomics 20 years on: what have we learned and what hurdles remain? The Plant Journal 94 (6), pp. 933 - 942 (2018)

Arif, M.A.; Alseekh, S.; Harb, J.; Fernie, A. R.; Frank, W.: Abscisic acid, cold and salt stimulate conserved metabolic regulation in the moss Physcomitrella patens. Plant Biology 20 (6), pp. 1014 - 1022 (2018)

Bermúdez, L.; Del Pozo, T.; Silvestre Lira, B.; de Godoy, F.; Boos, I.; Romanò, C.; Previtali, V.; Almeida, J.; Bréhélin, C.; Asis, R. et al.; Quadrana, L.; Demarco, D.; Alseekh, S.; Salinas Gamboa, R.; Pérez-Flores, L.; Dominguez, P.G.; Rothan, C.; Fernie, A. R.; González, M.; Stocker, A.; Hemmerle, A.; Clausen, M.H.; Carrari, F.; Rossi, M.: A Tomato Tocopherol-Binding Protein Sheds Light on Intracellular α-Tocopherol Metabolism in Plants. Plant and Cell Physiology 59 (11), pp. 2188 - 2203 (2018)

Cubillos, A.; Tong, H.; Alseekh, S.; de Abreu e Lima, F.; Yu, J.; Fernie, A. R.; Nikoloski, Z.; Laitinen, R.: Inheritance patterns in metabolism and growth in diallel crosses of Arabidopsis thaliana from a single growth habitat. Heredity 120, pp. 463 - 473 (2018)

Cui, X.; Wang, Y.; Ren, Y.; Fernie, A. R.; Alseekh, S.; He, H.; Gong, G.; Zhang, H.; Guo, S.; Zhang, J. et al.; Xu, Y.: Variance analysis of metabolite components between low sugar wild and high sugar cultivated watermelon fruits. Acta Horticulturae Sinica 45 (4), pp. 775 - 783 (2018)

de Oliveira Silva, F. M.; Lichtenstein, G.; Alseekh, S.; Rosado-Souza, L.; Conte, M.; Suguiyama, V. F.; Lira, B. S.; Fanourakis, D.; Usadel, B.; Bhering, L. L. et al.; DaMatta, F. M.; Sulpice, R.; Araújo, W. L.; Rossi, M.; de Setta, N.; Fernie, A. R.; Carrari, F.; Nunes-Nesi, A.: The genetic architecture of photosynthesis and plant growth-related traits in tomato. Plant, Cell and Environment 41 (2), pp. 327 - 341 (2018)

Durgud, M.; Gupta, S.; Ivanov, I.; Omidbakhshfard, M. A.; Benina, M.; Alseekh, S.; Staykov, N.; Hauenstein, M.; Dijkwel, P. P.; Hortensteiner, S. et al.; Toneva, V.; Brotman, Y.; Fernie, A. R.; Mueller-Roeber, B.; Gechev, T. S.: Molecular Mechanisms Preventing Senescence in Response to Prolonged Darkness in a Desiccation-Tolerant Plant. Plant Physiology 177 (3), pp. 1319 - 1338 (2018)

Fernie, A. R.; Alseekh, S.: Defining the convergence of ethylene and auxin signaling in tomato. New Phytologist 219 (2), pp. 479 - 481 (2018)

Garbowicz, K.; Liu, Z.; Alseekh, S.; Tieman, D.; Taylor, M.; Kuhalskaya, A.; Ofner, I.; Zamir, D.; Klee, H. J.; Fernie, A. R. et al.; Brotman, Y.: Quantitative Trait Loci Analysis Identifies a Prominent Gene Involved in the Production of Fatty Acid-Derived Flavor Volatiles in Tomato. Molecular Plant 11 (9), pp. 1147 - 1165 (2018)

Huang, L.; Pyc, M.; Alseekh, S.; McCarty, D. R.; de Crecy-Lagard, V.; Gregory III, J. F.; Henry, C. S.; Fernie, A. R.; Mullen, R. T.; Hanson, A. D.: A plastidial pantoate transporter with a potential role in pantothenate synthesis. Biochemical Journal 475, pp. 813 - 825 (2018)

Kong, F.; Burlacot, A.; Liang, Y.; Legeret, B.; Alseekh, S.; Brotman, Y.; Fernie, A. R.; Krieger-Liszkay, A.; Beisson, F.; Peltier, G. et al.; Li-Beisson, Y.: Interorganelle Communication: Peroxisomal MALATE DEHYDROGENASE2 Connects Lipid Catabolism to Photosynthesis through Redox Coupling in Chlamydomonas. Plant Cell 30 (8), pp. 1824 - 1847 (2018)

Nietzsche, M.; Guerra, T.; Alseekh, S.; Wiermer, M.; Sonnewald, S.; Fernie, A. R.; Börnkea, F.: STOREKEEPER RELATED1/G-element binding protein (STKR1) interacts with protein kinase SnRK1. Plant Physiology 176 (2), pp. 1773 - 1792 (2018)

Rosa-Tellez, S.; Djoro Anoman, A.; Flores-Tornero, M.; Toujani, W.; Alseekh, S.; Fernie, A. R.; Nebauer, S. G.; Munoz-Bertomeu, J.; Segura, J.; Ros, R.: Phosphoglycerate Kinases Are Co-Regulated to Adjust Metabolism and to Optimize Growth. Plant Physiology 176 (2), pp. 1182 - 1198 (2018)

Wen, W.; Jin, M.; Li, K.; Liu, H.; Xiao, Y.; Zhao, M.; Alseekh, S.; Li, W.; de Abreu e Lima, F.; Brotman, Y. et al.; Willmitzer, L.; Fernie, A. R.; Yan, J.: An integrated multi-layered analysis of the metabolic networks of different tissues uncovers key genetic components of primary metabolism in maize. The Plant Journal 93 (6), pp. 1116 - 1128 (2018)

Zhang, Y.; Swart, C.; Alseekh, S.; Scossa, F.; Jiang, L.; Obata, T.; Graf, A.; Fernie, A. R.: The Extra-Pathway Interactome of the TCA Cycle: Expected and Unexpected Metabolic Interactions. Plant Physiology 177 (3), pp. 966 - 979 (2018)

Alseekh, S.; Wu, S.; Brotman, Y.; Fernie, A. R.: Guidelines for Sample Normalization to Minimize Batch Variation for Large-Scale Metabolic Profiling of Plant Natural Genetic Variance. In: Methods in Molecular Biology, Vol. 1778, pp. 33 - 46 (Ed. António, C.). Humana Press, Clifton, N.J. (2018)

Scossa, F.; Benina, M.; Alseekh, S.; Zhang, Y.; Fernie, A. R.: The Integration of Metabolomics and Next-Generation Sequencing Data to Elucidate the Pathways of Natural Product Metabolism in Medicinal Plants. (2018)