Publications of the Group

Qian, D.; Xi, J.; Nie, Y.; Zou, M.; Zhang, J.; Alseekh, S.; Fernie, A. R.; Chen, J.; Huang, L.: Chemical characterization of dicaffeoyl polyamine derivatives to understand specific secondary metabolites in goji berry. Journal of Food Composition and Analysis 122, 105434 (2023)

Segarra-Medina, C.; Alseekh, S.; Fernie, A. R.; Rambla, J. L.; Pérez-Clemente, R. M.; Gómez-Cádenas, A.; Zandalinas, S. I.: Abscisic acid promotes plant acclimation to the combination of salinity and high light stress. Plant Physiology and Biochemistry 203, 108008 (2023)

Younis, I.Y.; Mohsen, E.; Ibrahim, R.M.; Fernie, A. R.; Alseekh, S.; Salem, M.A.: Non-targeted metabolomics and chemometrics for saffron (Crocus sativus L.) authentication and adulteration detection in relation to its anticholinesterase activity. Food Chemistry Advances 2, 100217 (2023)

Duque-Jaramillo, A.; Ulmer, N.; Alseekh, S.; Bezrukov, I.; Fernie, A. R.; Skirycz, A.; Karasov, T.L.; Weigel, D.: The genetic and physiological basis of Arabidopsis thaliana tolerance to Pseudomonas viridiflava. New Phytologist (2023)

Zayed, A.; Farag, M. A.; Mehring, A.; Salem, M. A.; Ibrahim, R. M.; Alseekh, S.; Fernie, A. R.; Ulber, R.: Methyl jasmonate elicitation effect on the metabolic profile of cambial meristematic cells culture derived from sweet basil (Ocimum basilicum L.) in relation to antioxidant activity: Untargeted metabolomics study in a time-based approach. Phytochemistry 213, 113777 (2023)

Alseekh, S.; Karakas, E.; Zhu, F.; Wijesingha Ahchige, M.; Fernie, A. R.: Plant biochemical genetics in the multiomics era. Journal of Experimental Botany 74 (15), pp. 4293 - 4307 (2023)

Correa Cordoba, S.; Tong, H.; Burgos, A.; Zhu, F.; Alseekh, S.; Fernie, A. R.; Nikoloski, Z.: Identification of gene function based on models capturing natural variability of Arabidopsis thaliana lipid metabolism. Nature Communications 14 (1), 4897 (2023)

Segarra-Medina, C.; Pascual, L. S.; Alseekh, S.; Fernie, A. R.; Rambla, J. L.; Gómez-Cadenas, A.; Zandalinas, S. I.: Comparison of metabolomic reconfiguration between Columbia and Landsberg ecotypes subjected to the combination of high salinity and increased irradiance. BMC Plant Biology 23, 406 (2023)

Fernie, A. R.; Alseekh, S.: Phylogenomic discovery of deleterious mutants completes the potato breeding revolution. Molecular Plant 16 (7), pp. 1103 - 1105 (2023)

Salem, M. A.; Aborehab, N. M.; Abdelhafez, M. M.; Ismail, S. H.; Maurice, N. W.; Azzam, M. A.; Alseekh, S.; Fernie, A. R.; Salama, M. M.; Ezzat, S. M.: Anti-Obesity Effect of a Tea Mixture Nano-Formulation on Rats Occurs via the Upregulation of AMP-Activated Protein Kinase/Sirtuin-1/Glucose Transporter Type 4 and Peroxisome Proliferator-Activated Receptor Gamma Pathways. Metabolites 13 (7), 871 (2023)

Aarabi, F.; Ghigi, A.; Wijesingha Ahchige, M.; Bulut, M.; Geigenberger, P.; Neuhaus, H. E.; Sampathkumar, A.; Alseekh, S.; Fernie, A. R.: Genome-Wide Association Study unveils ascorbate regulation by PAS/LOV PROTEIN during high light acclimation. Plant Physiology, kiad323 (2023)

Alseekh, S.; Fernie, A. R.: Expanding our coverage: Strategies to detect a greater range of metabolites. Current Opinion in Plant Biology 73, 102335 (2023)

Bulut, M.; Wendenburg, R.; Bitocchi, E.; Bellucci, E.; Kroc, M.; Gioia, T.; Susek, K.; Papa, R.; Fernie, A. R.; Alseekh, S.: A Comprehensive Metabolomics and Lipidomics Atlas for the Legumes Common Bean, Chickpea, Lentil and Lupin. The Plant Journal (2023)

Julca, I.; Mutwil-Anderwald, D.; Manoj, V.; Khan, Z.; Lai, S. K.; Yang, L. K.; Beh, I. T.; Dziekan, J.; Lim, Y. P.; Lim, S. K. et al.; Low, Y. W.; Lam, Y. I.; Tjia, S.; Mu, Y.; Tan, Q. W.; Nuc, P.; Choo, L. M.; Khew, G.; Shining, L.; Kam, A.; Tam, J. P.; Bozdech, Z.; Schmidt, M.; Usadel, B.; Kanagasundaram, Y.; Alseekh, S.; Fernie, A. R.; Li, H. Y.; Mutwil, M.: Genomic, transcriptomic, and metabolomic analysis of Oldenlandia corymbosa reveals the biosynthesis and mode of action of anti-cancer metabolites. Journal of Integrative Plant Biology 65 (6), pp. 1442 - 1466 (2023)

López, C. M.; Alseekh, S.; Torralbo, F.; Martinez Rivas, F.J.; Fernie, A. R.; Amil-Ruiz, F.; Alamillo, J. M.: Transcriptomic and metabolomic analysis reveals that symbiotic nitrogen fixation enhances drought resistance in common bean. Journal of Experimental Botany 74 (10), pp. 3203 - 3219 (2023)

Martinez Rivas, F.J.; Blanco-Portales, R.; Pérez-Serratosa, M.; Ric-Varas, P.; Sánchez, V. G.; Puche, L. M.; Moyano, L.; Mercado, J. Á.; Alseekh, S.; Caballero, J. L. et al.; Fernie, A. R.; Muñoz-Blanco, J.; Molina-Hidalgo, F. J.: FaMYB123 interacts with FabHLH3 to regulate the late steps of anthocyanin and flavonol accumulation during ripening. The Plant Journal 114 (3), pp. 683 - 698 (2023)

Wijesingha Ahchige, M.; Fernie, A. R.; Alseekh, S.: PANTOTHENATE KINASE4, LOSS OF GDU2, and TRANSPOSON PROTEIN1 affect the canalization of tomato fruit metabolism. Plant Physiology 192 (1), kiad093, pp. 442 - 468 (2023)

Zemach, I.; Alseekh, S.; Tadmor-Levi, R.; Fisher, J.; Torgeman, S.; Trigerman, S.; Nauen, J.; Hayut, S. F.; Mann, V.; Rochsar, E. et al.; Finkers, R.; Wendenburg, R.; Osorio, S.; Bergmann, S.; Lunn, J. E.; Semel, Y.; Hirschberg, J.; Fernie, A. R.; Zamir, D.: Multi-year field trials provide a massive repository of trait data on a highly diverse population of tomato and uncover novel determinants of tomato productivity. The Plant Journal (2023)

Bulut, M.; Alseekh, S.; Fernie, A. R.: Natural variation of respiration-related traits in plants. Plant Physiology 191 (4), pp. 2120 - 2132 (2023)

Bellucci, E.; Benazzo, A.; Xu, C.; Bitocchi, E.; Rodriguez, M.; Alseekh, S.; Di Vittori, V.; Gioia, T.; Neumann, K.; Cortinovis, G. et al.; Frascarelli, G.; Murube, E.; Trucchi, E.; Nanni, L.; Ariani, A.; Logozzo, G.; Shin, J. H.; Liu, C.; Jiang, L.; Ferreira, J. J.; Campa, A.; Attene, G.; Morrell, P. L.; Bertorelle, G.; Graner, A.; Gepts, P.; Fernie, A. R.; Jackson, S. A.; Papa, R.: Selection and adaptive introgression guided the complex evolutionary history of the European common bean. Nature Communications 14, 1908 (2023)