Publications of Mark Stitt

101.

Journal Article

Carillo, P.; Feil, R.; Gibon, Y.; Satoh-Nagasawa, N.; Jackson, D.; Bläsing, O. E.; Stitt, M.; Lunn, J. E.: A fluorometric assay for trehalose in the picomole range. Plant Methods 9, p. 21 - 21 (2013)

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102.

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Stitt, M.: Systems-integration of plant metabolism: means, motive and opportunity. CURRENT OPINION IN PLANT BIOLOGY 16 (3), pp. 381 - 388 (2013)

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103.

Journal Article

Duarte, G. T.; Matiolli, C. C.; Pant, B. D.; Schlereth, A.; Scheible, W.-R.; Stitt, M.; Vicentini, R.; Vincentz, M.: Involvement of microRNA-related regulatory pathways in the glucose-mediated control of Arabidopsis early seedling development. Journal of experimental botany 64 (14), pp. 4301 - 4312 (2013)

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104.

Journal Article

Martins, M. C. M.; Hejazi, M.; Fettke, J.; Steup, M.; Feil, R.; Krause, U.; Arrivault, S.; Vosloh, D.; Figueroa, C. M.; Ivakov, A. et al.; Yadav, U. P.; Piques, M.; Metzner, D.; Stitt, M.; Lunn, J. E.: Feedback inhibition of starch degradation in Arabidopsis leaves mediated by trehalose 6-phosphate. Plant physiology 163 (3), pp. 1142 - 1163 (2013)

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105.

Journal Article

Pal, S. K.; Liput, M.; Piques, M.; Ishihara, H.; Obata, T.; Martins, M. C.; Sulpice, R.; van Dongen, J. T.; Fernie, A. R.; Yadav, U. P. et al.; Lunn, J. E.; Usadel, B.; Stitt, M.: Diurnal changes of polysome loading track sucrose content in the rosette of wildtype Arabidopsis and the starchless pgm mutant. Plant Physiology 162 (3), pp. 1246 - 1265 (2013)

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106.

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Sulpice, R.; Nikoloski, Z.; Tschoep, H.; Antonio, C.; Kleeson, S.; Lahrlimi, A.; Selbig, J.; Hirofumi, I.; Gibon, Y.; Fernie, A. R. et al.; Stitt, M.: Impact of the carbon and nitrogen supply on relationships and connectivity between metabolism and biomass in a broad panel of Arabidopsis accessions. Plant Physiology 162 (1), pp. 347 - 363 (2013)

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107.

Journal Article

Szecowka, M.; Heise, R.; Tohge, T.; Nunes-Nesi, A.; Vosloh, D.; Huege, J.; Feil, R.; Lunn, J.; Nikoloski, Z.; Stitt, M. et al.; Fernie, A. R.; Arrivault, S.: Metabolic Fluxes in an Illuminated Arabidopsis Rosette. The Plant Cell 25 (2), pp. 694 - 714 (2013)

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108.

Journal Article

Wahl, V.; Ponnu, J.; Schlereth, A.; Arrivault, S.; Langenecker, T.; Franke, A.; Feil, R.; Lunn, J.; Stitt, M.; Schmid, M.: Regulation of Flowering by Trehalose-6-Phosphate Signaling in Arabidopsis thaliana. Science 339 (6120), pp. 704 - 707 (2013)

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109.

Journal Article

Baerenfaller, K.; Massonnet, C.; Walsh, S.; Baginsky, S.; Buhlmann, P.; Hennig, L.; Hirsch-Hoffmann, M.; Howell, K. A.; Kahlau, S.; Radziejwoski, A. et al.; Russenberger, D.; Rutishauser, D.; Small, I.; Stekhoven, D.; Sulpice, R.; Svozil, J.; Wuyts, N.; Stitt, M.; Hilson, P.; Granier, C.; Gruissem, W.: Systems-based analysis of Arabidopsis leaf growth reveals adaptation to water deficit. Molecular Systems Biology 8, p. 606 (2012)

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110.

Journal Article

Fernie, A. R.; Stitt, M.: On the discordance of metabolomics with proteomics and transcriptomics: coping with increasing complexity in logic, chemistry, and network interactions scientific correspondence. Plant Physiology 158 (3), pp. 1139 - 1145 (2012)

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111.

Journal Article

Ferraro, G.; Bortolotti, S.; Mortera, P.; Schlereth, A.; Stitt, M.; Carrari, F.; Kamenetzky, L.; Valle, E. M.: Novel glutamate dehydrogenase genes show increased transcript and protein abundances in mature tomato fruits. Journal of Plant Physiology 169 (9), pp. 899 - 907 (2012)

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112.

Journal Article

Haedrich, N.; Hendriks, J. H.; Koetting, O.; Arrivault, S.; Feil, R.; Zeeman, S. C.; Gibon, Y.; Schulze, W. X.; Stitt, M.; Lunn, J. E.: Mutagenesis of cysteine 81 prevents dimerization of the APS1 subunit of ADP-glucose pyrophosphorylase and alters diurnal starch turnover in Arabidopsis thaliana leaves. Plant Journal 70 (2), pp. 231 - 242 (2012)

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113.

Journal Article

Kleessen, S.; Antonio, C.; Sulpice, R.; Laitinen, R.; Fernie, A. R.; Stitt, M.; Nikoloski, Z.: Structured patterns in geographic variability of metabolic phenotypes in Arabidopsis thaliana. Nature Communications 3, p. 1319 (2012)

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114.

Journal Article

Lambers, H.; Cawthray, G. R.; Giavalisco, P.; Kuo, J.; Laliberte, E.; Pearse, S. J.; Scheible, W.-R.; Stitt, M.; Teste, F.; Turner, B. L.: Proteaceae from severely phosphorus-impoverished soils extensively replace phospholipids with galactolipids and sulfolipids during leaf development to achieve a high photosynthetic phosphorus-use-efficiency. New Phytologist 196 (4), pp. 1098 - 1108 (2012)

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115.

Journal Article

Lohse, M.; Bolger, A. M.; Nagel, A.; Fernie, A. R.; Lunn, J. E.; Stitt, M.; Usadel, B.: RobiNA: a user-friendly, integrated software solution for RNA-Seq-based transcriptomics. Nucleic Acids Research 40 (W1), pp. W622 - W627 (2012)

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116.

Journal Article

Pyl, E. T.; Piques, M.; Ivakov, A.; Schulze, W.; Ishihara, H.; Stitt, M.; Sulpice, R.: Metabolism and Growth in Arabidopsis Depend on the Daytime Temperature but Are Temperature-Compensated against Cool Nights. Plant Cell 24 (6), pp. 2443 - 2469 (2012)

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117.

Journal Article

Riedelsheimer, C.; Czedik-Eysenberg, A.; Grieder, C.; Lisec, J.; Technow, F.; Sulpice, R.; Altmann, T.; Stitt, M.; Willmitzer, L.; Melchinger, A. E.: Genomic and metabolic prediction of complex heterotic traits in hybrid maize. Nature Genetics 44 (2), pp. 217 - 220 (2012)

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118.

Journal Article

Riedelsheimer, C.; Czedik-Eysenberg, A.; Grieder, C.; Lisec, J.; Technow, F.; Sulpice, R.; Altmann, T.; Stitt, M.; Willmitzer, L.; Melchinger, A. E.: Genomic and metabolic prediction of complex heterotic traits in hybrid maize. Nature Genetics 44, pp. 217 - 220 (2012)

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119.

Journal Article

Riedelsheimer, C.; Lisec, J.; Czedik-Eysenberg, A.; Sulpice, R.; Flis, A.; Grieder, C.; Altmann, T.; Stitt, M.; Willmitzer, L.; Melchinger, A. E.: Genome-wide association mapping of leaf metabolic profiles for dissecting complex traits in maize. Proceedings of the National Academy of Sciences of the United States of America 109 (23), pp. 8872 - 8877 (2012)

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120.

Journal Article

Roach, M.; Gerber, L.; Sandquist, D.; Gorzsas, A.; Hedenstrom, M.; Kumar, M.; Steinhauser, M. C.; Feil, R.; Daniel, G.; Stitt, M. et al.; Sundberg, B.; Niittyla, T.: Fructokinase is required for carbon partitioning to cellulose in aspen wood. Plant Journal 70 (6), pp. 967 - 977 (2012)

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121.

Journal Article

Stitt, M.: Progress in understanding and engineering primary plant metabolism. Current opinion in biotechnology 24 (2), pp. 229 - 238 (2012)

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122.

Journal Article

Stitt, M.; Zeeman, S. C.: Starch turnover: pathways, regulation and role in growth. Current Opinion in Plant Biology 15 (3), pp. 282 - 292 (2012)

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123.

Journal Article

Timm, S.; Florian, A.; Arrivault, S.; Stitt, M.; Fernie, A. R.; Bauwe, H.: Glycine decarboxylase controls photosynthesis and plant growth. FEBS Letters 586 (20), pp. 3692 - 3697 (2012)

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124.

Journal Article

Diaz, C.; Kusano, M.; Sulpice, R.; Araki, M.; Redestig, H.; Saito, K.; Stitt, M.; Shin, R.: Determining novel functions of Arabidopsis 14-3-3 proteins in central metabolic processes. BMC Systems Biology 5, p. 192 - 192 (2011)

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125.

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Centeno, D. C.; Osorio, S.; Nunes-Nesi, A.; Bertolo, A. L. F.; Carneiro, R. T.; Araujo, W. L.; Steinhauser, M.-C.; Michalska, J.; Rohrmann, J.; Geigenberger, P. et al.; Oliver, S. N.; Stitt, M.; Carrari, F.; Rose, J. K. C.; Fernie, A. R.: Malate Plays a Crucial Role in Starch Metabolism, Ripening, and Soluble Solid Content of Tomato Fruit and Affects Postharvest Softening. The Plant Cell 23 (1), pp. 162 - 184 (2011)

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126.

Journal Article

Haedrich, N.; Gibon, Y.; Schudoma, C.; Altmann, T.; Lunn, J. E.; Stitt, M.: Use of TILLING and robotised enzyme assays to generate an allelic series of Arabidopsis thaliana mutants with altered ADP-glucose pyrophosphorylase activity. Journal of Plant Physiology 168 (12), pp. 1395 - 1405 (2011)

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127.

Journal Article

Lytovchenko, A.; Eickmeier, I.; Pons, C.; Osorio, S.; Szecowka, M.; Lehmberg, K.; Arrivault, S.; Tohge, T.; Pineda, B.; Anton, M. T. et al.; Hedtke, B.; Lu, Y.; Fisahn, J.; Bock, R.; Stitt, M.; Grimm, B.; Granell, A.; Fernie, A. R.: Tomato fruit photosynthesis is seemingly unimportant in primary metabolism and ripening but plays a considerable role in seed development. Plant Physiology 157 (4), pp. 1650 - 1663 (2011)

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128.

Journal Article

Marin, I. C.; Loef, I.; Bartetzko, L.; Searle, I.; Coupland, G.; Stitt, M.; Osuna, D.: Nitrate regulates floral induction in Arabidopsis, acting independently of light, gibberellin and autonomous pathways. Planta 233 (3), pp. 539 - 552 (2011)

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129.

Journal Article

Nagel, A.; Lohse, M.; Bolger, A.; Bolger, A. M.; Stitt, M.; Usadel, B.: Visualizing large, high-throughput datasets based on the cognitive representation of biological pathways. Human Vision and Electronic Imaging Xvi 7865, p. 78650h (2011)

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130.

Journal Article

Steinhauser, M.-C.; Steinhauser, D.; Gibon, Y.; Bolger, M.; Arrivault, S.; Usadel, B.; Zamir, D.; Fernie, A. R.; Stitt, M.: Identification of Enzyme Activity Quantitative Trait Loci in a Solanum lycopersicum X Solanum pennellii Introgression Line Population. Plant Physiology 157 (3), pp. 998 - 1014 (2011)

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131.

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Tohge, T.; Mettler, T.; Arrivault, S.; Carroll, A. J.; Stitt, M.; Fernie, A. R.: From models to crop species: caveats and solutions for translational metabolomics. Frontiers in Plant Science 2, p. 61 (2011)

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132.

Journal Article

Yazdanbakhsh, N.; Sulpice, R.; Graf, A.; Stitt, M.; Fisahn, J.: Circadian control of root elongation and C partitioning in Arabidopsis thaliana. Plant Cell and Environment 34 (6), pp. 877 - 894 (2011)

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133.

Journal Article

Childs, L. H.; Witucka-Wall, H.; Gunther, T.; Sulpice, R.; Korff, M. V.; Stitt, M.; Walther, D.; Schmid, K. J.; Altmann, T.: Single feature polymorphism (SFP)-based selective sweep identification and association mapping of growth-related metabolic traits in Arabidopsis thaliana. BMC Genomics 11, p. 188 (2010)

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134.

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Gonzalez, N.; de Bodt, S.; Sulpice, R.; Jikumaru, Y.; Chae, E.; Dhondt, S.; van Daele, T.; de Milde, L.; Weigel, D.; Kamiya, Y. et al.; Stitt, M.; Beemster, G. T. S.; Inze, D.: Increased Leaf Size: Different Means to an End. Plant Physiology 153 (3), pp. 1261 - 1279 (2010)

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135.

Journal Article

Graf, A.; Schlereth, A.; Stitt, M.; Smith, A. M.: Circadian control of carbohydrate availability for growth in Arabidopsis plants at night. Proceedings of the National Academy of Sciences of the United States of America 107 (20), pp. 9458 - 9463 (2010)

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136.

Journal Article

Hummel, I.; Pantin, F.; Sulpice, R.; Piques, M.; Rolland, G.; Dauzat, M.; Christophe, A.; Pervent, M.; Bouteille, M.; Stitt, M. et al.; Gibon, Y.; Muller, B.: Arabidopsis Plants Acclimate to Water Deficit at Low Cost through Changes of Carbon Usage: An Integrated Perspective Using Growth, Metabolite, Enzyme, and Gene Expression Analysis. Plant Physiology 154 (1), pp. 357 - 372 (2010)

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137.

Journal Article

Lohse, M.; Nunes-Nesi, A.; Krueger, P.; Nagel, A.; Hannemann, J.; Giorgi, F. M.; Childs, L.; Osorio, S.; Walther, D.; Selbig, J. et al.; Sreenivasulu, N.; Stitt, M.; Fernie, A. R.; Usadel, B.: Robin: An Intuitive Wizard Application for R-Based Expression Microarray Quality Assessment and Analysis. Plant Physiology 153 (2), pp. 642 - 651 (2010)

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138.

Journal Article

Parent, B.; Turc, O.; Gibon, Y.; Stitt, M.; Tardieu, F.: Modelling temperature-compensated physiological rates, based on the co-ordination of responses to temperature of developmental processes. Journal of Experimental Botany 61 (8), pp. 2057 - 2069 (2010)

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139.

Journal Article

Pracharoenwattana, I.; Zhou, W. X.; Keech, O.; Francisco, P. B.; Udomchalothorn, T.; Tschoep, H.; Stitt, M.; Gibon, Y.; Smith, S. M.: Arabidopsis has a cytosolic fumarase required for the massive allocation of photosynthate into fumaric acid and for rapid plant growth on high nitrogen. Plant Journal 62 (5), pp. 785 - 795 (2010)

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140.

Journal Article

Steinhauser, M.-C.; Steinhauser, D.; Koehl, K. I.; Carrari, F.; Gibon, Y.; Fernie, A. R.; Stitt, M.: Enzyme Activity Profiles during Fruit Development in Tomato Cultivars and Solanum pennellii. Plant Physiology 153 (1), pp. 80 - 98 (2010)

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141.

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Stitt, M.; Lunn, J.; Usadel, B.: Arabidopsis and primary photosynthetic metabolism - more than the icing on the cake. The Plant Journal 61 (6), pp. 1067 - 1091 (2010)

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142.

Journal Article

Sulpice, R.; Sienkiewicz-Porzucek, A.; Osorio, S.; Krahnert, I.; Stitt, M.; Fernie, A. R.; Nunes-Nesi, A.: Mild reductions in cytosolic NADP-dependent isocitrate dehydrogenase activity result in lower amino acid contents and pigmentation without impacting growth. Amino Acids 39 (4), pp. 1055 - 1066 (2010)

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143.

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Sulpice, R.; Trenkamp, S.; Steinfath, M.; Usadel, B.; Gibon, Y.; Witucka-Wall, H.; Pyl, E. T.; Tschoep, H.; Steinhauser, M.-C.; Guenther, M. et al.; Hoehne, M.; Rohwer, J. M.; Altmann, T.; Fernie, A. R.; Stitt, M.: Network analysis of enzyme activities and metabolite levels and their relationship to biomass in a large panel of Arabidopsis accessions. The Plant Cell 22 (8), pp. 2872 - 2893 (2010)

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144.

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van der Merwe, M. J.; Groenewald, J. H.; Stitt, M.; Kossmann, J.; Botha, F. C.: Downregulation of pyrophosphate: d-fructose-6-phosphate 1-phosphotransferase activity in sugarcane culms enhances sucrose accumulation due to elevated hexose-phosphate levels. Planta 231 (3), pp. 595 - 608 (2010)

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145.

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Zhang, N.; Gibon, Y.; Gur, A.; Chen, C.; Lepak, N.; Hoehne, M.; Zhang, Z.; Kroon, D.; Tschoep, H.; Stitt, M. et al.; Buckler, E.: Fine Quantitative Trait Loci Mapping of Carbon and Nitrogen Metabolism Enzyme Activities and Seedling Biomass in the Maize IBM Mapping Population. Plant Physiology 154 (4), pp. 1753 - 1765 (2010)

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146.

Journal Article

Zhang, N. Y.; Gur, A.; Gibon, Y.; Sulpice, R.; Flint-Garcia, S.; McMullen, M. D.; Stitt, M.; Buckler, E. S.: Genetic Analysis of Central Carbon Metabolism Unveils an Amino Acid Substitution That Alters Maize NAD-Dependent Isocitrate Dehydrogenase Activity. PLoS One 5 (4), p. e9991 (2010)

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147.

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Armengaud, P.; Sulpice, R.; Miller, A. J.; Stitt, M.; Amtmann, A.; Gibon, Y.: Multilevel Analysis of Primary Metabolism Provides New Insights into the Role of Potassium Nutrition for Glycolysis and Nitrogen Assimilation in Arabidopsis Roots. Plant Physiology 150 (2), pp. 772 - 785 (2009)

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148.

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Arrivault, S.; Guenther, M.; Ivakov, A.; Feil, R.; Vosloh, D.; van Dongen, J. T.; Sulpice, R.; Stitt, M.: Use of reverse-phase liquid chromatography, linked to tandem mass spectrometry, to profile the Calvin cycle and other metabolic intermediates in Arabidopsis rosettes at different carbon dioxide concentrations. Plant Journal 59 (5), pp. 824 - 839 (2009)

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149.

Journal Article

Gibon, Y.; Pyl, E. T.; Sulpice, R.; Lunn, J. E.; Hoehne, M.; Guenther, M.; Stitt, M.: Adjustment of growth, starch turnover, protein content and central metabolism to a decrease of the carbon supply when Arabidopsis is grown in very short photoperiods. Plant Cell and Environment 32 (7), pp. 859 - 874 (2009)

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150.

Journal Article

Hannemann, J.; Poorter, H.; Usadel, B.; Blaesing, O. E.; Finck, A.; Tardieu, F.; Atkin, O. K.; Pons, T.; Stitt, M.; Gibon, Y.: Xeml Lab: a tool that supports the design of experiments at a graphical interface and generates computer-readable metadata files, which capture information about genotypes, growth conditions, environmental perturbations and sampling strategy. Plant Cell and Environment 32 (9), pp. 1185 - 1200 (2009)

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Journal Article (369)