Publications of Mark Stitt | Max Planck Institute of Molecular Plant Physiology

Max Planck Institute of Molecular Plant Physiology

Journal Article (368)

151.

Journal Article

Rotter, A.; Camps, C.; Lohse, M.; Kappel, C.; Pilati, S.; Hren, M.; Stitt, M.; Coutos-Thevenot, P.; Moser, C.; Usadel, B. et al.; Delrot, S.; Gruden, K.: Gene expression profiling in susceptible interaction of grapevine with its fungal pathogen Eutypa lata: Extending MapMan ontology for grapevine. BMC Plant Biology 9, p. 104 (2009)

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152.

Journal Article

Sulpice, R.; Pyl, E. T.; Ishihara, H.; Trenkamp, S.; Steinfath, M.; Witucka-Wall, H.; Gibon, Y.; Usadel, B.; Poree, F.; Piques, M. C. et al.; von Korff, M.; Steinhauser, M.-C.; Keurentjes, J. J. B.; Guenther, M.; Hoehne, M.; Selbig, J.; Fernie, A. R.; Altmann, T.; Stitt, M.: Starch as a major integrator in the regulation of plant growth. Proceedings of the National Academy of Sciences of the United States of America 106 (25), pp. 10348 - 10353 (2009)

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153.

Journal Article

Usadel, B.; Poree, F.; Nagel, A.; Lohse, M.; Czedik-Eysenberg, A.; Stitt, M.: A guide to using MapMan to visualize and compare Omics data in plants: a case study in the crop species, Maize. Plant Cell and Environment 32 (9), pp. 1211 - 1229 (2009)

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154.

Journal Article

Voll, L. M.; Hajirezaei, M.-R.; Czogalla-Peter, C.; Lein, W.; Stitt, M.; Sonnewald, U.; Bornke, F.: Antisense inhibition of enolase strongly limits the metabolism of aromatic amino acids, but has only minor effects on respiration in leaves of transgenic tobacco plants. New Phytologist 184 (3), pp. 607 - 618 (2009)

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155.

Journal Article

Ainsworth, E. A.; Beier, C.; Calfapietra, C.; Ceulemans, R.; Durand-Tardif, M.; Farquhar, G. D.; Godbold, D. L.; Hendrey, G. R.; Hickler, T.; Kaduk, J. et al.; Karnosky, D. F.; Kimball, B. A.; Koerner, C.; Koornneef, M.; Lafarge, T.; Leakey, A. D. B.; Lewin, K. F.; Long, S. P.; Manderscheid, R.; Mcneil, D. L.; Mies, T. A.; Miglietta, F.; Morgan, J. A.; Nagy, J.; Norby, R. J.; Norton, R. M.; Percy, K. E.; Rogers, A.; Soussana, J. F.; Stitt, M.; Weigel, H. J.; White, J. W.: Next generation of elevated [CO2] experiments with crops: a critical investment for feeding the future world. Plant, Cell and Environment 31 (9), pp. 1317 - 1324 (2008)

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156.

Journal Article

Doehlemann, G.; Wahl, R.; Horst, R. J.; Voll, L. M.; Usadel, B.; Poree, F.; Stitt, M.; Pons-Kuhnemann, J.; Sonnewald, U.; Kahmann, R. et al.; Kamper, J.: Reprogramming a maize plant: transcriptional and metabolic changes induced by the fungal biotroph Ustilago maydis. Plant Journal 56 (2), pp. 181 - 195 (2008)

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157.

Journal Article

Grigston, J. C.; Osuna, D.; Scheible, W.-R.; Liu, C.; Stitt, M.; Jones, A. M.: D-Glucose sensing by a plasma membrane regulator of G signaling protein, AtRGS1. FEBS Letters 582 (25-26), pp. 3577 - 3584 (2008)

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158.

Journal Article

Kakar, K.; Wandrey, M.; Czechowski, T.; Gaertner, T.; Scheible, W.-R.; Stitt, M.; Torres-Jerez, I.; Xiao, Y.; Redman, J. C.; Wu, H. C. et al.; Cheung, F.; Town, C. D.; Udvardi, M. K.: A community resource for high-throughput quantitative RT-PCR analysis of transcription factor gene expression in Medicago truncatula. Plant Methods 4, p. 18 (2008)

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159.

Journal Article

Keurentjes, J. J. B.; Sulpice, R.; Gibon, Y.; Steinhauser, M.-C.; Fu, J. Y.; Koornneef, M.; Stitt, M.; Vreugdenhil, D.: Integrative analyses of genetic variation in enzyme activities of primary carbohydrate metabolism reveal distinct modes of regulation in Arabidopsis thaliana. Genome Biology 9 (8), p. R129 (2008)

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160.

Journal Article

Lein, W.; Usadel, B.; Stitt, M.; Reindl, A.; Ehrhardt, T.; Sonnewald, U.; Boernke, F.: Large-scale phenotyping of transgenic tobacco plants (Nicotiana tabacum) to identify essential leaf functions. Plant Biotechnology Journal 6 (3), pp. 246 - 263 (2008)

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161.

Journal Article

Lohse, M.; Krueger, P.; Hannemann, J.; Nagel, A.; Stitt, M.; Walther, D.; Usadel, B.: Robin - Microarray Experimentanalyse leicht gemacht. GenomXPress: Informationen aus der Deutschen Genomforschung 3, pp. 16 - 17 (2008)

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162.

Journal Article

Sreenivasulu, N.; Usadel, B.; Winter, A.; Radchuk, V.; Scholz, U.; Stein, N.; Weschke, W.; Strickert, M.; Close, T. J.; Stitt, M. et al.; Graner, A.; Wobus, U.: Barley grain maturation and germination: Metabolic pathway and regulatory network commonalities and differences highlighted by new MapMan/PageMan profiling tools. Plant Physiology 146 (4), pp. 1738 - 1758 (2008)

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163.

Journal Article

Usadel, B.; Blaesing, O. E.; Gibon, Y.; Retzlaff, K.; Hoehne, M.; Guenther, M.; Stitt, M.: Global transcript levels respond to small changes of the carbon status during progressive exhaustion of carbohydrates in Arabidopsis rosettes. Plant Physiology 146 (4), pp. 1834 - 1861 (2008)

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164.

Journal Article

Ainsworth, E. A.; Rogers, A.; Leakey, A. D. B.; Heady, L. E.; Gibon, Y.; Stitt, M.; Schurr, U.: Does elevated atmospheric [CO2] alter diurnal C uptake and the balance of C and N metabolites in growing and fully expanded soybean leaves? Journal of Experimental Botany 58 (3), pp. 579 - 591 (2007)

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165.

Journal Article

Morcuende, R.; Bari, R.; Gibon, Y.; Zheng, W.; Pant, B. D.; Blaesing, O.; Usadel, B.; Czechowski, T.; Udvardi, M. K.; Stitt, M. et al.; Scheible, W.-R.: Genome-wide reprogramming of metabolism and regulatory networks of Arabidopsis in response to phosphorus. Plant Cell and Environment 30 (1), pp. 85 - 112 (2007)

MPG.PuRe

166.

Journal Article

Osuna, D.; Usadel, B.; Morcuende, R.; Gibon, Y.; Blaesing, O. E.; Hoehne, M.; Gunter, M.; Kamlage, B.; Trethewey, R.; Scheible, W.-R. et al.; Stitt, M.: Temporal responses of transcripts, enzyme activities and metabolites after adding sucrose to carbon-deprived Arabidopsis seedlings. Plant Journal 49 (3), pp. 463 - 491 (2007)

MPG.PuRe

167.

Journal Article

Rotter, A.; Usadel, B.; Baebler, S.; Stitt, M.; Gruden, K.: Adaptation of the MapMan ontology to biotic stress responses: application in solanaceous species. Plant Methods 3, p. 10 (2007)

MPG.PuRe

168.

Journal Article

Sulpice, R.; Tschoep, H.; von Korff, M.; Buessis, D.; Usadel, B.; Hoehne, M.; Witucka-Wall, H.; Altmann, T.; Stitt, M.; Gibon, Y.: Description and applications of a rapid and sensitive non-radioactive microplate-based assay for maximum and initial activity of D-ribulose-1,5-bisphosphate carboxylase/oxygenase. Plant Cell and Environment 30 (9), pp. 1163 - 1175 (2007)

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169.

Journal Article

Tellstroem, V.; Usadel, B.; Thimm, O.; Stitt, M.; Kuester, H.; Niehaus, K.: The lipopolysaccharide of Sinorhizobium meliloti suppresses defense-associated gene expression in cell cultures of the host plant Medicago truncatula. Plant Physiology 143 (2), pp. 825 - 837 (2007)

MPG.PuRe

170.

Journal Article

Bari, R.; Pant, B. D.; Stitt, M.; Scheible, W.-R.: PHO2, microRNA399, and PHR1 define a phosphate-signaling pathway in plants. Plant Physiology 141 (3), pp. 988 - 999 (2006)

MPG.PuRe

171.

Journal Article

Cross, J. M.; von Korff, M.; Altmann, T.; Bartzetko, L.; Sulpice, R.; Gibon, Y.; Palacios, N.; Stitt, M.: Variation of enzyme activities and metabolite levels in 24 arabidopsis accessions growing in carbon-limited conditions. Plant Physiology 142 (4), pp. 1574 - 1588 (2006)

MPG.PuRe

172.

Journal Article

Fritz, C.; Palacios-Rojas, N.; Feil, R.; Stitt, M.: Regulation of secondary metabolism by the carbon-nitrogen status in tobacco: nitrate inhibits large sectors of phenylpropanoid metabolism. Plant Journal 46 (4), pp. 533 - 548 (2006)

MPG.PuRe

173.

Journal Article

Gibon, Y.; Usadel, B.; Blaesing, O. E.; Kamlage, B.; Hoehne, M.; Trethewey, R.; Stitt, M.: Integration of metabolite with transcript and enzyme activity profiling during diurnal cycles in Arabidopsis rosettes. Genome Biology 7 (8), p. R76 (2006)

MPG.PuRe

174.

Journal Article

Kolbe, A.; Oliver, S. N.; Fernie, A. R.; Stitt, M.; van Dongen, J. T.; Geigenberger, P.: Combined transcript and metabolite profiling of Arabidopsis leaves reveals fundamental effects of the thiol-disulfide status on plant metabolism. Plant Physiology 141 (2), pp. 412 - 422 (2006)

MPG.PuRe

175.

Journal Article

Lunn, J. E.; Feil, R.; Hendriks, J. H. M.; Gibon, Y.; Morcuende, R.; Osuna, D.; Scheible, W.-R.; Carillo, P.; Hajirezaei, M.-R.; Stitt, M.: Sugar-induced increases in trehalose 6-phosphate are correlated with redox activation of ADPglucose pyrophosphorylase and higher rates of starch synthesis in Arabidopsis thaliana. Biochemical Journal 397 (1), pp. 139 - 148 (2006)

MPG.PuRe

176.

Journal Article

Rogers, A.; Gibon, Y.; Stitt, M.; Morgan, P. B.; Bernacchi, C. J.; Ort, D. R.; Long, S. P.: Increased C availability at elevated carbon dioxide concentration improves N assimilation in a legume. Plant Cell and Environment 29 (8), pp. 1651 - 1658 (2006)

MPG.PuRe

177.

Journal Article

Urbanczyk-Wochniak, E.; Usadel, B.; Thimm, O.; Nunes-Nesi, A.; Carrari, F.; Davy, M.; Blaesing, O.; Kowalczyk, M.; Weicht, D.; Polinceusz, A. et al.; Meyer, S.; Stitt, M.; Fernie, A. R.: Conversion of MapMan to allow the analysis of transcript data from Solanaceous species: Effects of genetic and environmental alterations in energy metabolism in the leaf. Plant Molecular Biology 60 (5), pp. 773 - 792 (2006)

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178.

Journal Article

Blaesing, O. E.; Gibon, Y.; Guenther, M.; Hoehne, M.; Morcuende, R.; Osuna, D.; Thimm, O.; Usadel, B.; Scheible, W.-R.; Stitt, M.: Sugars and circadian regulation make major contributions to the global regulation of diurnal gene expression in Arabidopsis. Plant Cell 17 (12), pp. 3257 - 3281 (2005)

MPG.PuRe

179.

Journal Article

Czechowski, T.; Stitt, M.; Altmann, T.; Udvardi, M. K.; Scheible, W.-R.: Genome-wide identification and testing of superior reference genes for transcript normalization in Arabidopsis. Plant Physiology 139 (1), pp. 5 - 17 (2005)

MPG.PuRe

180.

Journal Article

Fernie, A. R.; Geigenberger, P.; Stitt, M.: Flux an important, but neglected, component of functional glenomics. Current Opinion in Plant Biology 8 (2), pp. 174 - 182 (2005)

MPG.PuRe

181.

Journal Article

Kopka, J.; Schauer, N.; Krueger, S.; Birkemeyer, C.; Usadel, B.; Bergmueller, E.; Doermann, P.; Weckwerth, W.; Gibon, Y.; Stitt, M. et al.; Willmitzer, L.; Fernie, A. R.; Steinhauser, D.: GMD@CSB.DB: the Golm Metabolome Database. Bioinformatics 21 (8), pp. 1635 - 1638 (2005)

MPG.PuRe

182.

Journal Article

Czechowski, T.; Bari, R. P.; Stitt, M.; Scheible, W.-R.; Udvardi, M. K.: Real-time RT-PCR profiling of over 1400 Arabidopsis transcription factors: unprecedented sensitivity reveals novel root- and shoot-specific genes. Plant Journal 38 (2), pp. 366 - 379 (2004)

MPG.PuRe

183.

Journal Article

Gibon, Y.; Blaesing, O. E.; Hannemann, J.; Carillo, P.; Hoehne, M.; Hendriks, J. H. M.; Palacios, N.; Cross, J.; Selbig, J.; Stitt, M.: A robot-based platform to measure multiple enzyme activities in Arabidopsis using a set of cycling assays: Comparison of changes of enzyme activities and transcript levels during diurnal cycles and in prolonged darkness. Plant Cell 16 (12), pp. 3304 - 3325 (2004)

MPG.PuRe

184.

Journal Article

Gibon, Y.; Blaesing, O. E.; Palacios-Rojas, N.; Pankovic, D.; Hendriks, J. H. M.; Fisahn, J.; Hoehne, M.; Guenther, M.; Stitt, M.: Adjustment of diurnal starch turnover to short days: depletion of sugar during the night leads to a temporary inhibition of carbohydrate utilization, accumulation of sugars and post-translational activation of ADP-glucose pyrophosphorylase in the following light period. Plant Journal 39 (6), pp. 847 - 862 (2004)

MPG.PuRe

185.

Journal Article

Scheible, W.-R.; Morcuende, R.; Czechowski, T.; Fritz, C.; Osuna, D.; Palacios-Rojas, N.; Schindelasch, D.; Thimm, O.; Udvardi, M. K.; Stitt, M.: Genome-wide reprogramming of primary and secondary metabolism, protein synthesis, cellular growth processes, and the regulatory infrastructure of Arabidopsis in response to nitrogen. Plant Physiology 136 (1), pp. 2483 - 2499 (2004)

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186.

Journal Article

Thimm, O.; Blaesing, O.; Gibon, Y.; Nagel, A.; Meyer, S.; Krueger, P.; Selbig, J.; Mueller, L. A.; Rhee, S. Y.; Stitt, M.: MAPMAN: a user-driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processes. Plant Journal 37 (6), pp. 914 - 939 (2004)

MPG.PuRe

187.

Journal Article

Zuther, E.; Buchel, K.; Hundertmark, M.; Stitt, M.; Hincha, D. K.; Heyer, A. G.: The role of raffinose in the cold acclimation response of Arabidopsis thaliana. FEBS Letters 576 (1-2), pp. 169 - 173 (2004)

MPG.PuRe

188.

Journal Article

Hendriks, J. H. M.; Kolbe, A.; Gibon, Y.; Stitt, M.; Geigenberger, P.: ADP-glucose pyrophosphorylase is activated by posttranslational redox-modification in response to light and to sugars in leaves of Arabidopsis and other plant species. Plant Physiology 133 (2), pp. 838 - 849 (2003)

MPG.PuRe

189.

Journal Article

Stitt, M.; Blaesing, O.; Gibon, Y.; Thimm, O.; Scheible, W.-R.: Das Problem der Fuelle. Funktionelle Genomik von Kohlenhydrat- und Stickstoff-Stoffwechsel in Arabidopsis. GenomXpress 3, pp. 2 - 5 (2003)

MPG.PuRe

190.

Journal Article

Fernie, A. R.; Tiessen, A.; Stitt, M.; Willmitzer, L.; Geigenberger, P.: Altered metabolic fluxes result from shifts in metabolite levels in sucrose phosphorylase-expressing potato tubers. Plant Cell and Environment 25 (10), pp. 1219 - 1232 (2002)

MPG.PuRe

191.

Journal Article

Gibon, Y.; Vigeolas, H.; Tiessen, A.; Geigenberger, P.; Stitt, M.: Sensitive and high throughput metabolite assays for inorganic pyrophosphate, ADPGlc, nucleotide phosphates, and glycolytic intermediates based on a novel enzymic cycling system. Plant Journal 30 (2), pp. 221 - 235 (2002)

MPG.PuRe

192.

Journal Article

Matt, P.; Krapp, A.; Haake, V.; Mock, H.-P.; Stitt, M.: Decreased Rubisco activity leads to dramatic changes of nitrate metabolism, amino acid metabolism and the levels of phenylpropanoids and nicotine in tobacco antisense RBCS transformants. Plant Journal 30 (6), pp. 663 - 677 (2002)

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193.

Journal Article

Stitt, M.; Hurry, V.: Plant odyssey - Adaptation of plants to cold. Biofutur (224), pp. 18 - 21 (2002)

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194.

Journal Article

Tiessen, A.; Hendriks, J. H. M.; Stitt, M.; Branscheid, A.; Gibon, Y.; Farre, E. M.; Geigenberger, P.: Starch synthesis in potato tubers is regulated by post-translational redox modification of ADP-glucose pyrophosphorylase: A novel regulatory mechanism linking starch synthesis to the sucrose supply. Plant Cell 14 (9), pp. 2191 - 2213 (2002)

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195.

Journal Article

Henkes, S.; Sonnewald, U.; Badur, R.; Flachmann, R.; Stitt, M.: A small decrease of plastid transketolase activity in antisense tobacco transformants has dramatic effects on photosynthesis and phenylpropanoid metabolism. Plant Cell 13 (3), pp. 535 - 551 (2001)

MPG.PuRe

196.

Journal Article

Loef, I.; Stitt, M.; Geigenberger, P.: Increased levels of adenine nucleotides modify the interaction between starch synthesis and respiration when adenine is supplied to discs from growing potato tubers. Planta 212 (5-6), pp. 782 - 791 (2001)

MPG.PuRe

197.

Journal Article

Matt, P.; Geiger, M.; Walch-Liu, P.; Engels, C.; Krapp, A.; Stitt, M.: The immediate cause of the diurnal changes of nitrogen metabolism in leaves of nitrate-replete tobacco: a major imbalance between the rate of nitrate reduction and the rates of nitrate uptake and ammonium metabolism during the first part of the light period. Plant Cell and Environment 24 (2), pp. 177 - 190 (2001)

MPG.PuRe

198.

Journal Article

Matt, P.; Geiger, M.; Walch-Liu, P.; Engels, C.; Krapp, A.; Stitt, M.: Elevated carbon dioxide increases nitrate uptake and nitrate reductase activity when tobacco is growing on nitrate, but increases ammonium uptake and inhibits nitrate reductase activity when tobacco is growing on ammonium nitrate. Plant Cell and Environment 24 (11), pp. 1119 - 1137 (2001)

MPG.PuRe

199.

Journal Article

Mueller, C.; Scheible, W.-R.; Stitt, M.; Krapp, A.: Influence of malate and 2-oxoglutarate on the NIA transcript level and nitrate reductase activity in tobacco leaves. Plant Cell and Environment 24 (2), pp. 191 - 203 (2001)

MPG.PuRe

200.

Journal Article

Nielsen, T. H.; Stitt, M.: Tobacco transformants with strongly decreased expression of pyrophosphate: fructose-6-phosphate expression in the base of their young growing leaves contain much higher levels of fructose-2,6-bisphosphate but no major changes in fluxes. Planta 214 (1), pp. 106 - 116 (2001)

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