Publications of the Group

Max Planck Institute of Molecular Plant Physiology

Journal Article (398)

151.

Journal Article

Czedik-Eysenberg, A.; Arrivault, S.; Lohse, M.A.; Feil, R.; Krohn, N.; Encke, B.; Nunes-Nesi, A.; Fernie, A. R.; Lunn, J. E.; Sulpice, R. et al.; Stitt, M.: The interplay between carbon availability and growth in different zones of the growing maize leaf. Plant Physiology 172 (2), pp. 943 - 967 (2016)

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152.

Journal Article

Dyson, B. C.; Miller, M. A.E.; Feil, R.; Rattray, N.; Bowsher, C. G.; Goodacre, R.; Lunn, J. E.; Johnson, G. N.: FUM2, a cytosolic fumarase, is essential for acclimation to low temperature in arabidopsis thaliana. Plant Physiology 172 (1), pp. 118 - 127 (2016)

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153.

Journal Article

Figueroa, C. M.; Feil, R.; Ishihara, H.; Watanabe, M.; Kolling, K.; Krause, U.; Höhne, M.; Encke, B.; Plaxton, W. C.; Zeeman, S. C. et al.; Li, Z.; Schulze, W. X.; Hoefgen, R.; Stitt, M.; Lunn, J. E.: Trehalose 6-phosphate coordinates organic and amino acid metabolism with carbon availability. The Plant Journal 85 (3), pp. 410 - 423 (2016)

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154.

Journal Article

Flis, A.; Sulpice, R.; Seaton, D. D.; Ivakov, A.; Liput, M.; Abel, C.; Millar, A. J.; Stitt, M.: Photoperiod-dependent changes in the phase of core clock transcripts and global transcriptional outputs at dawn and dusk in Arabidopsis. Plant, Cell and Environment 39 (9), pp. 1955 - 1981 (2016)

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155.

Journal Article

Harsman, A.; Schock, A.; Hemmis, B.; Wahl, V.; Jeshen, I.; Bartsch, P.; Schlereth, A.; Pertl-Obermeyer, H.; Goetze, T.A.; Soll, J. et al.; Philippar, K.; Wagner, R.: OEP40, a regulated glucose-permeable β-barrel solute channel in the chloroplast outer envelope membrane. Journal of Biological Chemistry 291 (34), pp. 17848 - 17860 (2016)

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156.

Journal Article

Ishihara, H.; Tohge, T.; Viehover, P.; Fernie, A. R.; Weisshaar, B.; Stracke, R.: Natural variation in flavonol accumulation in Arabidopsis is determined by the flavonol glucosyltransferase BGLU6. Journal of Experimental Botany 67 (5), pp. 1505 - 1517 (2016)

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157.

Journal Article

Martin, A. P.; Palmer, W. M.; Brown, C.; Abel, C.; Lunn, J. E.; Furbank, R. T.; Grof, C. P. L.: A developing Setaria viridis internode: an experimental system for the study of biomass generation in a C-4 model species. Biotechnology for Biofuels 9, 45 (2016)

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158.

Journal Article

Shane, M. W.; Feil, R.; Lunn, J. E.; Plaxton, W. C.: Light-dependent activation of phosphoenolpyruvate carboxylase by reversible phosphorylation in cluster roots of white lupin plants: diurnal control in response to photosynthate supply. Annals of Botany 118 (4-SI), pp. 637 - 643 (2016)

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159.

Journal Article

Tohge, T.; Wendenburg, R.; Ishihara, H.; Nakabayashi, R.; Watanabe, M.; Sulpice, R.; Hoefgen, R.; Takayama, H.; Saito, K.; Stitt, M. et al.; Fernie, A. R.: Characterization of a recently evolved flavonol-phenylacyltransferase gene provides signatures of natural light selection in Brassicaceae. Nature Communications 7, 12399 (2016)

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160.

Journal Article

Toubiana, D.; Xue, W.; Zhang, N.; Kremling, K.; Gur, A.; Pilosof, S.; Gibon, Y.; Stitt, M.; Buckler, E. S.; Fernie, A. R. et al.; Fait, A.: Correlation-Based Network Analysis of Metabolite and Enzyme Profiles Reveals a Role of Citrate Biosynthesis in Modulating N and C Metabolism in Zea mays. Frontiers in Plant Science 7, 1022 (2016)

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161.

Journal Article

Vicente, R.; Pérez, P.; Martínez-Carrasco, R.; Feil, R.; Lunn, J. E.; Watanabe, M.; Arrivault, S.; Stitt, M.; Hoefgen, R.; Morcuende, R.: Metabolic and Transcriptional Analysis of Durum Wheat Responses to Elevated CO2 at Low and High Nitrate Supply. Plant Cell Physiology 57 (10), pp. 2133 - 2146 (2016)

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162.

Journal Article

Wu, S.; Alseekh, S.; Cuadros-Inostroza, A. C.; Fusari, C. M.; Mutwil, M.; Kooke, R.; Keurentjes, J. B.; Fernie, A. R.; Willmitzer, L.; Brotman, Y.: Combined Use of Genome-Wide Association Data and Correlation Networks Unravels Key Regulators of Primary Metabolism in Arabidopsis thaliana. PLoS Genetics 12 (10), e1006363 (2016)

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163.

Journal Article

Zhang, W.; Thieme, C. J.; Kollwig, G.; Apelt, F.; Yang, L.; Winter, N.; Andresen, N.; Walther, D.; Kragler, F.: tRNA-Related Sequences Trigger Systemic mRNA Transport in Plants. Plant Cell 28 (6), pp. 1237 - 1249 (2016)

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164.

Journal Article

Curto, M.; Krajinski, F.; Schlereth, A.; Rubiales, D.: Transcriptional profiling of Medicago truncatula during Erysiphe pisi infection. Frontiers in Plant Science 6, 517 (2015)

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165.

Journal Article

Arrivault, S.; Guenther, M.; Fry, S. C.; Fünfgeld, M. F.F.; Veye, D.; Mettler-Altmann, T.; Stitt, M.; Lunn, J. E.: Synthesis and Use of Stable-Isotope-Labeled Internal Standards for Quantification of Phosphorylated Metabolites by LC-MS/MS. Analytical Chemistry 87 (13), pp. 6896 - 6904 (2015)

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166.

Journal Article

Dyson, B. C.; Allwood, J. W.; Feil, R.; Xu, Y.; Miller, M.; Bowsher, C. G.; Goodacre, R.; Lunn, J. E.; Johnson, G. N.: Acclimation of metabolism to light in Arabidopsis thaliana: the glucose 6-phosphate/phosphate translocator GPT2 directs metabolic acclimation. Plant, Cell and Environment 38 (7), pp. 1404 - 1417 (2015)

MPG.PuRe

167.

Journal Article

Barbier, F. F.; Lunn, J. E.; Beveridge, C. A.: Ready, steady, go! A sugar hit starts the race to shoot branching. Current Opinion in Plant Biology 25, pp. 39 - 45 (2015)

MPG.PuRe

168.

Journal Article

Ferraro, G.; D'Angelo, M.; Sulpice, R.; Stitt, M.; Valle, E. M.: Reduced levels of NADH-dependent glutamate dehydrogenase decrease the glutamate content of ripe tomato fruit but have no effect on green fruit or leaves. Journal of Experimental Botany 66 (11), pp. 3381 - 3389 (2015)

MPG.PuRe

169.

Journal Article

Piazza, A.; Zimaro, T.; Garavaglia, B. S.; Ficarra, F. A.; Thomas, L.; Marondedze, C.; Feil, R.; Lunn, J. E.; Gehring, C.; Ottado, J. et al.; Gottig, N.: The dual nature of trehalose in citrus canker disease: a virulence factor for Xanthomonas citri subsp citri and a trigger for plant defence responses. Journal of Experimental Botany 66 (9), pp. 2795 - 2811 (2015)

MPG.PuRe

170.

Journal Article

Delorge, I.; Figueroa, C. M.; Feil, R.; Lunn, J. E.; Van Dijck, P.: Trehalose-6-phosphate synthase 1 is not the only active TPS in Arabidopsis thaliana. Biochemical Journal 466, pp. 283 - 290 (2015)

MPG.PuRe

171.

Journal Article

Khozaei, M.; Fisk, S.; Lawson, T.; Gibon, Y.; Sulpice, R.; Stitt, M.; Lefebvre, S. C.; Raines, C. A.: Overexpression of Plastid Transketolase in Tobacco Results in a Thiamine Auxotrophic Phenotype. Plant Cell 27 (2), pp. 432 - 447 (2015)

MPG.PuRe

172.

Journal Article

Apelt, F.; Breuer, D.; Nikoloski, Z.; Stitt, M.; Kragler, F.: Phytotyping(4D): a light-field imaging system for non-invasive and accurate monitoring of spatio-temporal plant growth. The Plant Journal 82 (4), pp. 693 - 706 (2015)

MPG.PuRe

173.

Journal Article

Baerenfaller, K.; Massonnet, C.; Hennig, L.; Russenberger, D.; Sulpice, R.; Walsh, S.; Stitt, M.; Granier, C.; Gruissem, W.: A long photoperiod relaxes energy management in Arabidopsis leaf six. Current Plant Biology 2, pp. 34 - 45 (2015)

MPG.PuRe

174.

Journal Article

Bielecka, M.; Watanabe, M.; Morcuende, R.; Scheible, W.-R.; Hawkesford, M. J.; Hesse, H.; Hoefgen, R.: Transcriptome and metabolome analysis of plant sulphate starvation and resupply provides novel information on transcriptional regulation of metabolism associated with sulphur, nitrogen and phosphorus nutritional responses in Arabidopsis. Frontiers in Plant Science 5, 805 (2015)

MPG.PuRe

175.

Journal Article

Flis, A.; Fernandez, A. P.; Zielinski, T.; Mengin, V.; Sulpice, R.; Stratford, K.; Hume, A.; Pokhilko, A.; Southern, M. M.; Seaton, D. D. et al.; McWatters, H. G.; Stitt, M.; Halliday, K. J.; Millar, A. J.: Defining the robust behaviour of the plant clock gene circuit with absolute RNA timeseries and open infrastructure. Open biology 5 (10), 150042 (2015)

MPG.PuRe

176.

Journal Article

Garapati, P.; Feil, R.; Lunn, J. E.; Van Dijck, P.; Balazadeh, S.; Mueller-Roeber, B.: Transcription Factor Arabidopsis Activating Factor1 Integrates Carbon Starvation Responses with Trehalose Metabolism. Plant Physiology 169 (1), pp. 379 - 390 (2015)

MPG.PuRe

177.

Journal Article

Heise, R.; Fernie, A. R.; Stitt, M.; Nikoloski, Z.: Pool size measurements facilitate the determination of fluxes at branching points in non-stationary metabolic flux analysis: the case of Arabidopsis thaliana. Frontiers in Plant Science 6, 386 (2015)

MPG.PuRe

178.

Journal Article

Ishihara, H.; Obata, T.; Sulpice, R.; Fernie, A. R.; Stitt, M.: Quantifying Protein Synthesis and Degradation in Arabidopsis by Dynamic 13CO2 Labeling and Analysis of Enrichment in Individual Amino Acids in Their Free Pools and in Protein. Plant Physiology 168 (1), pp. 74 - 93 (2015)

MPG.PuRe

179.

Journal Article

Lambers, H.; Finnegan, P. M.; Jost, R.; Plaxton, W. C.; Shane, M. W.; Stitt, M.: Phosphorus nutrition in Proteaceae and beyond. Nature Plants 1, 15109 (2015)

MPG.PuRe

180.

Journal Article

Leida, C.; Moser, C.; Esteras, C.; Sulpice, R.; Lunn, J. E.; de langen, F.; Monforte, A. J.; Pico, B.: Variability of candidate genes, genetic structure and association with sugar accumulation and climacteric behavior in a broad germplasm collection of melon (Cucumis melo L.). BMC Genetics 16, 28 (2015)

MPG.PuRe

181.

Journal Article

Pham, P. A.; Wahl, V.; Tohge, T.; de Souza, L. P.; Zhang, Y.; Do, P. T.; Olas, J. J.; Stitt, M.; Araujo, W. L.; Fernie, A. R.: Analysis of knockout mutants reveals non-redundant functions of poly(ADP-ribose)polymerase isoforms in Arabidopsis. Plant Molecular Biology 89 (4-5), pp. 319 - 338 (2015)

MPG.PuRe

182.

Journal Article

Pilkington, S. M.; Encke, B.; Krohn, N.; Höhne, M.; Stitt, M.; Pyl, E. T.: Relationship between starch degradation and carbon demand for maintenance and growth in Arabidopsis thaliana in different irradiance and temperature regimes. Plant, Cell and Environment 38 (1), pp. 157 - 171 (2015)

MPG.PuRe

183.

Journal Article

Popova, A. V.; Rausch, S.; Hundertmark, M.; Gibon, Y.; Hincha, D. K.: The intrinsically disordered protein LEA7 from Arabidopsis thaliana protects the isolated enzyme lactate dehydrogenase and enzymes in a soluble leaf proteome during freezing and drying. Biochimica et Biophysica Acta (BBA) - General Subjects 1854 (10 Pt A), pp. 1517 - 1525 (2015)

MPG.PuRe

184.

Journal Article

Saladie, M.; Canizares, J.; Phillips, M. A.; Rodriguez-Concepcion, M.; Larrigaudiere, C.; Gibon, Y.; Stitt, M.; Lunn, J. E.; Garcia-Mas, J.: Comparative transcriptional profiling analysis of developing melon (Cucumis melo L.) fruit from climacteric and non-climacteric varieties. BMC Genomics 16, 440 (2015)

MPG.PuRe

185.

Journal Article

Zhang, N.; Gibon, Y.; Wallace, J. G.; Lepak, N.; Li, P.; Dedow, L.; Chen, C.; So, Y.-S.; Kremling, K.; Bradbury, P. J. et al.; Brutnell, T.; Stitt, M.; Buckler, E. S.: Genome-wide association of carbon and nitrogen metabolism in the maize nested association mapping population. Plant Physiology 168 (2), pp. 575 - 583 (2015)

MPG.PuRe

186.

Journal Article

Wallace, J. G.; Bradbury, P. J.; Zhang, N.; Gibon, Y.; Stitt, M.; Buckler, E. S.: Association Mapping across Numerous Traits Reveals Patterns of Functional Variation in Maize. PLoS Genetics 10 (12), e1004845 (2014)

MPG.PuRe

187.

Journal Article

Thalhammer, A.; Bryant, G.; Sulpice, R.; Hincha, D. K.: Disordered Cold Regulated15 Proteins Protect Chloroplast Membranes during Freezing through Binding and Folding, But Do Not Stabilize Chloroplast Enzymes in Vivo. Plant Physiology 166 (1), pp. 190 - 201 (2014)

MPG.PuRe

188.

Journal Article

Wu, X. N.; Sklodowski, K.; Encke, B.; Schulze, W. X.: A Kinase-Phosphatase Signaling Module with BSK8 and BSL2 Involved in Regulation of Sucrose-Phosphate Synthase. Journal of Proteome Research 13 (7), pp. 3397 - 3409 (2014)

MPG.PuRe

189.

Journal Article

Kleessen, S.; Laitinen, R.; Fusari, C. M.; Antonio, C.; Sulpice, R.; Fernie, A. R.; Stitt, M.; Nikoloski, Z.: Metabolic efficiency underpins performance trade-offs in growth of Arabidopsis thaliana. Nature Communications 5, 3537 (2014)

MPG.PuRe

190.

Journal Article

Arrivault, S.; Guenther, M.; Florian, A.; Encke, B.; Feil, R.; Vosloh, D.; Lunn, J. E.; Sulpice, R.; Fernie, A. R.; Stitt, M. et al.; Schulze, W. X.: Dissecting the Subcellular Compartmentation of Proteins and Metabolites in Arabidopsis Leaves Using Non-aqueous Fractionation. Molecular and Cellular Proteomics 13 (9), pp. 2246 - 2259 (2014)

MPG.PuRe

191.

Journal Article

Chew, Y. H.; Wenden, B.; Flis, A.; Mengin, V.; Taylor, J.; Davey, C. L.; Tindal, C.; Thomas, H.; Ougham, H. J.; de Reffye, P. et al.; Stitt, M.; Williams, M.; Muetzelfeldt, R.; Halliday, K. J.; Millar, A. J.: Multiscale digital Arabidopsis predicts individual organ and whole-organism growth. Proceedings of the National Academy of Sciences of the United States of America 111 (39), pp. E4127 - E4136 (2014)

MPG.PuRe

192.

Journal Article

Dasgupta, K.; Khadilkar, A.S.; Sulpice, R.; Pant, B.; Scheible, W.-R.; Fisahn, J.; Stitt, M.; Ayre, B.G.: Expression of sucrose transporter cDNAs specifically in companion cells enhances phloem loading and long-distance transport of sucrose but leads to an inhibition of growth and the perception of a phosphate limitation. Plant Physiology 165 (2), pp. 715 - 731 (2014)

MPG.PuRe

193.

Journal Article

Florian, A.; Nikoloski, Z.; Sulpice, R.; Timm, S.; Araujo, W. L.; Tohge, T.; Bauwe, H.; Fernie, A. R.: Analysis of Short-Term Metabolic Alterations in Arabidopsis Following Changes in the Prevailing Environmental Conditions. Molecular Plant 7 (5 - SI), pp. 893 - 911 (2014)

MPG.PuRe

194.

Journal Article

Gallep, C. M.; Moraes, T. A.; Cervinkova, K.; Cifra, M.; Katsumata, M.; Barlow, P. W.: Lunisolar tidal synchronism with biophoton emission during intercontinental wheat-seedling germination tests. Plant Signaling & Behavior 9 (3), p. e28671 - e28671 (2014)

MPG.PuRe

195.

Journal Article

Heise, R.; Arrivault, S.; Szecowka, M.; Tohge, T.; Nunes-Nesi, A.; Stitt, M.; Nikoloski, Z.; Fernie, A. R.: Flux profiling of photosynthetic carbon metabolism in intact plants. Nature Protocols 9 (8), pp. 1803 - 1824 (2014)

MPG.PuRe

196.

Journal Article

Henry, C.; Bledsoe, S. W.; Siekman, A.; Kollman, A.; Waters, B. M.; Feil, R.; Stitt, M.; Lagrimini, L. M.: The trehalose pathway in maize: conservation and gene regulation in response to the diurnal cycle and extended darkness. Journal of Experimental Botany 65 (20), pp. 5959 - 5973 (2014)

MPG.PuRe

197.

Journal Article

Kuppusamy, T.; Giavalisco, P.; Arvidsson, S.; Sulpice, R.; Stitt, M.; Finnegan, P. M.; Scheible, W.-R.; Lambers, H.; Jost, R.: Lipid Biosynthesis and Protein Concentration Respond Uniquely to Phosphate Supply during Leaf Development in Highly Phosphorus-Efficient Hakea prostrata. Plant Physiology 166 (4), pp. 1891 - 911 (2014)

MPG.PuRe

198.

Journal Article

Lohse, M.; Nagel, A.; Herter, T.; May, P.; Schroda, M.; Zrenner, R.; Tohge, T.; Fernie, A. R.; Stitt, M.; Usadel, B.: Mercator: a fast and simple web server for genome scale functional annotation of plant sequence data. Plant Cell Environment 37 (5), pp. 1250 - 1258 (2014)

MPG.PuRe

199.

Journal Article

Lunn, J. E.; Delorge, I.; Figueroa, C. M.; Van Dijck, P.; Stitt, M.: Trehalose metabolism in plants. The Plant Journal 79 (4), pp. 544 - 567 (2014)

MPG.PuRe

200.

Journal Article

Mettler, T.; Mühlhaus, T.; Hemme, D.; Schöttler, M. A.; Rupprecht, J.; Idoine, A.; Veyel, D.; Pal, S. K.; Yaneva-Roder, L.; Winck, F. V. et al.; Sommer, F.; Vosloh, D.; Seiwert, B.; Erban, A.; Burgos, A.; Arvidsson, S.; Schönfelder, S.; Arnold, A.; Günther, M.; Krause, U.; Lohse, M.; Kopka, J.; Nikoloski, Z.; Mueller-Roeber, B.; Willmitzer, L.; Bock, R.; Schroda, M.; Stitt, M.: Systems Analysis of the Response of Photosynthesis, Metabolism, and Growth to an Increase in Irradiance in the Photosynthetic Model Organism Chlamydomonas reinhardtii. The Plant Cell 26 (6), pp. 2310 - 2350 (2014)

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