Steinhauser, M.-C.; Steinhauser, D.; Gibon, Y.; Bolger, M.; Arrivault, S.; Usadel, B.; Zamir, D.; Fernie, A. R.; Stitt, M.: Identification of Enzyme Activity Quantitative Trait Loci in a Solanum lycopersicum X Solanum pennellii Introgression Line Population. Plant Physiology 157 (3), pp. 998 - 1014 (2011)

Tohge, T.; Ramos, M. S.; Nunes-Nesi, A.; Mutwil, M.; Giavalisco, P.; Steinhauser, D.; Schellenberg, M.; Willmitzer, L.; Persson, S.; Martinoia, E. et al.; Fernie, A. R.: Toward the storage metabolome: profiling the barley vacuole. Plant Physiology 157 (3), pp. 1469 - 1482 (2011)

Balazadeh, S.; Siddiqui, H.; Allu, A. D.; Matallana-Ramirez, L. P.; Caldana, C.; Mehrnia, M.; Zanor, M. I.; Koehler, B.; Mueller-Roeber, B.: A gene regulatory network controlled by the NAC transcription factor ANAC092/AtNAC2/ORE1 during salt-promoted senescence. Plant Journal 62 (2), pp. 250 - 264 (2010)

Cuadros-Inostroza, A.; Giavalisco, P.; Hummel, J.; Eckardt, A.; Willmitzer, L.; Pena-Cortes, H.: Discrimination of Wine Attributes by Metabolome Analysis. Analytical Chemistry 82 (9), pp. 3573 - 3580 (2010)

Espinoza, C.; Degenkolbe, T.; Caldana, C.; Zuther, E.; Leisse, A.; Willmitzer, L.; Hincha, D. K.; Hannah, M. A.: Interaction with diurnal and circadian regulation results in dynamic metabolic and transcriptional changes during cold acclimation in Arabidopsis. PLoS One 5 (11), p. e14101 (2010)

Hannah, M. A.; Caldana, C.; Steinhauser, D.; Balbo, I.; Fernie, A. R.; Willmitzer, L.: Combined Transcript and Metabolite Profiling of Arabidopsis Grown under Widely Variant Growth Conditions Facilitates the Identification of Novel Metabolite-Mediated Regulation of Gene Expression. Plant Physiology 152 (4), pp. 2120 - 2129 (2010)

Jozefczuk, S.; Klie, S.; Catchpole, G.; Szymanski, J.; Cuadros-Inostroza, A.; Steinhauser, D.; Selbig, J.; Willmitzer, L.: Metabolomic and transcriptomic stress response of Escherichia coli. Molecular Systems Biology 6, p. 364 (2010)

Klie, S.; Nikoloski, Z.; Selbig, J.: Biological Cluster Evaluation for Gene Function Prediction. Journal of Computational Biology 17, pp. 1 - 18 (2010)

Massonnet, C.; Vile, D.; Fabre, J.; Hannah, M. A.; Caldana, C.; Lisec, J.; Beemster, G. T. S.; Meyer, R. C.; Messerli, G.; Gronlund, J. T. et al.; Perkovic, J.; Wigmore, E.; May, S.; Bevan, M. W.; Meyer, C.; Rubio-Diaz, S.; Weigel, D.; Micol, J. L.; Buchanan-Wollaston, V.; Fiorani, F.; Walsh, S.; Rinn, B.; Gruissem, W.; Hilson, P.; Hennig, L.; Willmitzer, L.; Granier, C.: Probing the Reproducibility of Leaf Growth and Molecular Phenotypes: A Comparison of Three Arabidopsis Accessions Cultivated in Ten Laboratories. Plant Physiology 152 (4), pp. 2142 - 2157 (2010)

Meyer, R. C.; Kusterer, B.; Lisec, J.; Steinfath, M.; Becher, M.; Scharr, H.; Melchinger, A. E.; Selbig, J.; Schurr, U.; Willmitzer, L. et al.; Altmann, T.: QTL analysis of early stage heterosis for biomass in Arabidopsis. Theoretical and Applied Genetics 120 (2), pp. 227 - 237 (2010)

Robles, P.; Fleury, D.; Candela, H.; Cnops, G.; Alonso-Peral, M. M.; Anami, S.; Falcone, A.; Caldana, C.; Willmitzer, L.; Ponce, M. R. et al.; van Lijsebettens, M.; Micol, J. L.: The RON1/FRY1/SAL1 Gene Is Required for Leaf Morphogenesis and Venation Patterning in Arabidopsis. Plant Physiology 152 (3), pp. 1357 - 1372 (2010)

Sanchez, D. H.; Szymanski, J.; Erban, A.; Udvardi, M. K.; Kopka, J.: Mining for robust transcriptional and metabolic responses to long-term salt stress: a case study on the model legume Lotus japonicus. Plant Cell and Environment 33 (4), pp. 468 - 480 (2010)

Scherling, C.; Roscher, C.; Giavalisco, P.; Schulze, E.-D.; Weckwerth, W.: Metabolomics Unravel Contrasting Effects of Biodiversity on the Performance of Individual Plant Species. PLoS One 5 (9), p. e12569 (2010)

Sienkiewicz-Porzucek, A.; Sulpice, R.; Osorio, S.; Krahnert, I.; Leisse, A.; Urbanczyk-Wochniak, E.; Hodges, M.; Fernie, A. R.; Nunes-Nesi, A.: Mild Reductions in Mitochondrial NAD-Dependent Isocitrate Dehydrogenase Activity Result in Altered Nitrate Assimilation and Pigmentation But Do Not Impact Growth. Molecular Plant 3 (1), pp. 156 - 173 (2010)

Steinfath, M.; Gaertner, T.; Lisec, J.; Meyer, R. C.; Altmann, T.; Willmitzer, L.; Selbig, J.: Prediction of hybrid biomass in Arabidopsis thaliana by selected parental SNP and metabolic markers. Theoretical and Applied Genetics 120 (2), pp. 239 - 247 (2010)

Steinhauser, M.-C.; Steinhauser, D.; Koehl, K. I.; Carrari, F.; Gibon, Y.; Fernie, A. R.; Stitt, M.: Enzyme Activity Profiles during Fruit Development in Tomato Cultivars and Solanum pennellii. Plant Physiology 153 (1), pp. 80 - 98 (2010)

Vogel, J. T.; Walter, M. H.; Giavalisco, P.; Lytovchenko, A.; Kohlen, W.; Charnikhova, T.; Simkin, A. J.; Goulet, C.; Strack, D.; Bouwmeester, H. J. et al.; Fernie, A. R.; Klee, H. J.: SlCCD7 controls strigolactone biosynthesis, shoot branching and mycorrhiza-induced apocarotenoid formation in tomato. The Plant Journal 61 (2), pp. 300 - 311 (2010)

Zbierzak, A. M.; Kanwischer, M.; Wille, C.; Vidi, P. A.; Giavalisco, P.; Lohmann, A.; Briesen, I.; Porfirova, S.; Brehelin, C.; Kessler, F. et al.; Doermann, P.: Intersection of the tocopherol and plastoquinol metabolic pathways at the plastoglobule. Biochemical Journal 425 (2), pp. 389 - 399 (2010)

Afzal, A. J.; Natarajan, A.; Saini, N.; Iqbal, M. J.; Geisler, M.; El Shemy, H. A.; Mungur, R.; Willmitzer, L.; Lightfoot, D. A.: The Nematode Resistance Allele at the rhg1 Locus Alters the Proteome and Primary Metabolism of Soybean Roots. Plant Physiology 151 (3), pp. 1264 - 1280 (2009)

Angelovici, R.; Fait, A.; Zhu, X. H.; Szymanski, J.; Feldmesser, E.; Fernie, A. R.; Galili, G.: Deciphering Transcriptional and Metabolic Networks Associated with Lysine Metabolism during Arabidopsis Seed Development. Plant Physiology 151 (4), pp. 2058 - 2072 (2009)