Publications of the Group

Schlossarek, D.; Luzarowski, M.; Sokolowska, E.; Gorka, M.; Willmitzer, L.; Skirycz, A.: PROMISed: A novel web-based tool to facilitate analysis and visualization of the molecular interaction networks from co-fractionation mass spectrometry (CF-MS) experiments. Computational and Structural Biotechnology Journal 19, pp. 5117 - 5125 (2021)

Moreno, J.C.; Rojas, B.E.; Vicente, R.; Gorka, M.; Matz, T.; Kosmacz, M.; Peralta-Ariza, J.S.; Zhang, Y.; Alseekh, S.; Childs, D. et al.; Luzarowski, M.; Nikoloski, Z.; Zarivach, R.; Walther, D.; Hartman, M.D.; Figueroa, C.M.; Iglesias, A.A.; Fernie, A. R.; Skirycz, A.: Tyr-Asp inhibition of glyceraldehyde 3-phosphate dehydrogenase affects plant redox metabolism. EMBO Journal, e106800 (2021)

Caroca, R.; Howell, K. A.; Malinova, I.; Burgos, A.; Tiller, N.; Pellizzer, T.; Annunziata, M. G.; Hasse, C.; Ruf, S.; Karcher, D. et al.; Bock, R.: Knock-down of the plastid-encoded acetyl-CoA carboxylase gene uncovers functions in metabolism and development. Plant Physiology 185 (3), pp. 1091 - 1110 (2021)

Luzarowski, M.; Vicente, R.; Kiselev, A.; Wagner, M.; Schlossarek, D.; Erban, A.; de Souza, L. P.; Childs, D.; Wojciechowska, I.; Luzarowska, U. et al.; Gorka, M.; Sokolowska, E.; Kosmacz, M.; Moreno, J.C.; Brzezinska, A.; Vegesna, B.; Kopka, J.; Fernie, A. R.; Willmitzer, L.; Ewald, J. C.; Skirycz, A.: Global mapping of protein–metabolite interactions in Saccharomyces cerevisiae reveals that Ser-Leu dipeptide regulates phosphoglycerate kinase activity. Communications Biology 4 (1), 181 (2021)

Martín-Pizarro, C.; Vallarino, J. G.; Osorio, S.; Meco, V.; Urrutia, M.; Pillet, J.; Casañal, A.; Merchante, C.; Amaya, I.; Willmitzer, L. et al.; Fernie, A. R.; Giovannoni, J. J.; Botella, M. A.; Valpuesta, V.; Posé, D.: The NAC transcription factor FaRIF controls fruit ripening in strawberry. The Plant Cell 33 (5), pp. 1574 - 1593 (2021)

Schlossarek, D.; Luzarowski, M.; Sokolowska, E.; Gorka, M.; Willmitzer, L.; Skirycz, A.: PROMISed: A novel web-based tool to facilitate analysis and visualization of the molecular interaction networks from co-fractionation mass spectrometry (CF-MS) experiments. Computational and Structural Biotechnology Journal (2021)

Uflewski, M.; Mielke, S.; Correa Galvis, V.; von Bismarck, T.; Chen, X.; Tietz, E.; Ruß, J.; Luzarowski, M.; Sokolowska, E.; Skirycz, A. et al.; Eirich, J.; Finkemeier, I.; Schöttler, M. A.; Armbruster, U.: Functional characterization of proton antiport regulation in the thylakoid membrane. Plant Physiology (2021)

Cerda, A.; Moreno, J.C.; Acosta, D.; Godoy, F.; Cáceres, J. C.; Cabrera, R.; Stange, C.: Functional characterization and in silico modelling of MdPSY2 variants and MdPSY5 phytoene synthases from Malus domestica. Journal of Plant Physiology 249, 153166 (2020)

Chodasiewicz, M.; Sokolowska, E.; Nelson-Dittrich, A. C.; Masiuk, A.; Moreno, J.C.; Nelson, A. D. L.; Skirycz, A.: Identification and Characterization of the Heat-Induced Plastidial Stress Granules Reveal New Insight Into Arabidopsis Stress Response. Frontiers in Plant Science 11, 597592 (2020)

Cuadros-Inostroza, Á.; Verdugo-Alegría, C.; Willmitzer, L.; Moreno-Simunovic, Y.; Vallarino, J. G.: Non-Targeted Metabolite Profiles and Sensory Properties Elucidate Commonalities and Differences of Wines Made with the Same Variety but Different Cultivar Clones. Metabolites 10 (6), E220 (2020)

Kosmacz, M.; Skirycz, A.: The Isolation of Stress Granules From Plant Material. Current Protocols in Plant Biology 5 (3), e20118 (2020)

Kosmacz, M.; Sokolowska, E.; Bouzaa, S.; Skirycz, A.: Towards a functional understanding of the plant metabolome. Current Opinion in Plant Biology 55, pp. 47 - 51 (2020)

Moreno, J.C.; Mi, J.; Agrawal, S.; Kössler, S.; Turečková, V.; Tarkowská, D.; Thiele, W.; Al-Babili, S.; Bock, R.; Schöttler, M. A.: Expression of a carotenogenic gene allows faster biomass production by redesigning plant architecture and improving photosynthetic efficiency in tobacco. The Plant Journal 103 (6), pp. 1967 - 1984 (2020)

Perlikowski, D.; Augustyniak, A.; Skirycz, A.; Pawłowicz, I.; Masajada, K.; Eckhardt, Ä.; Kosmala, A.: Efficient root metabolism improves drought resistance of Festuca arundinacea. Plant and Cell Physiology 61 (3), pp. 492 - 504 (2020)

Pott, D. M.; Vallarino, J. G.; Cruz-Rus, E.; Willmitzer, L.; Sanchez-Sevilla, J. F.; Amaya, I.; Osorio, S.: Genetic analysis of phenylpropanoids and antioxidant capacity in strawberry fruit reveals mQTL hotspots and candidate genes. Scientific Reports 10 (1), 20197 (2020)

Pott, D. M.; de Abreu e Lima, F.; Soria, C.; Willmitzer, L.; Fernie, A. R.; Nikoloski, Z.; Osorio, S.; Vallarino, J. G.: Metabolic reconfiguration of strawberry physiology in response to postharvest practices. Food Chemistry 321, 126747 (2020)

Vallarino, J.G.; Merchante, C.; Sánchez-Sevilla, J.F.; de Luis Balaguer, M.A.; Pott, D.M.; Ariza, M.T.; Casañal, A.; Posé, D.; Vioque, A.; Amaya, I. et al.; Willmitzer, L.; Solano, R.; Sozzani, R.; Fernie, A. R.; Botella, M.A.; Giovannoni, J.J.; Valpuesta, V.; Osorio, S.: Characterizing the involvement of FaMADS9 in the regulation of strawberry fruit receptacle development. Plant Biotechnology Journal 18 (4), pp. 929 - 943 (2020)

Watanabe, M.; Ueda, Y.; Kondo, K.; Ishikawa, S.; Tohge, T.; Burgos, A.; Brotman, Y.; Fernie, A. R.; Walther, D.; Hoefgen, R. et al.; Wissuwa, M.: Metabolomic markers and physiological adaptations for high phosphate utilization efficiency in rice. Plant, Cell and Environment 43 (9), pp. 2066 - 2079 (2020)

Yu, Q.; He, Z.; Zubkov, D.; Huang, S.; Kurochkin, I.; Yang, X.; Halene, T.; Willmitzer, L.; Giavalisco, P.; Akbarian, S. et al.; Khaitovich, P.: Lipidome alterations in human prefrontal cortex during development, aging, and cognitive disorders. Molecular Psychiatry 25 (11), pp. 2952 - 2969 (2020)

Li, K.; Wen, W.; Alseekh, S.; Yang, X.; Guo, H.; Li, W.; Wang, L.; Pan, Q.; Zhan, W.; Liu, J. et al.; Li, Y.; Wu, X.; Brotman, Y.; Willmitzer, L.; Li, J.; Fernie, A. R.; Yan, J.: Large-scale metabolite quantitative trait locus analysis provides new insights for high-quality maize improvement. The Plant Journal 99 (2), pp. 216 - 230 (2019)