Publications of A. Flis

Chew, Y. H., Seaton, D. D., Mengin, V., Flis, A., Mugford, S. T., George, G. M., Moulin, M., Hume, A., Zeeman, S. C., Fitzpatrick, T. B., Smith, A. M., Stitt, M. & Millar, A. J. The Arabidopsis Framework Model version 2 predicts the organism-level effects of circadian clock gene mis-regulation. in silico Plants 4, (2022).

Flis, A., Mengin, V., Ivakov, A., Mugford, S. T., Hubberten, H. M., Encke, B., Krohn, N., Höhne, M., Feil, R., Hoefgen, R., Lunn, J. E., Millar, A. J., Smith, A. M., Sulpice, R. & Stitt, M. Multiple circadian clock outputs regulate diel turnover of carbon and nitrogen reserves. Plant, Cell and Environment 42, 549–573 (2019).

Apelt, F., Breuer, D., Olas, J. J., Annunziata, M. G., Flis, A., Nikoloski, Z., Kragler, F. & Stitt, M. Circadian, Carbon, and Light Control of Expansion Growth and Leaf Movement. Plant Physiology 174, 1949–1968 (2017).

Fernandez, O., Ishihara, H., George, G. M., Mengin, V., Flis, A., Sumner, D., Arrivault, S., Feil, R., Lunn, J. E., Zeeman, S. C., Smith, A. M. & Stitt, M. Leaf Starch Turnover Occurs in Long Days and in Falling Light at the End of the Day. Plant Physiology 174, 2199–2212 (2017).

Graf, A., Coman, D., Uhrig, R. G., Walsh, S., Flis, A., Stitt, M. & Gruissem, W. Parallel analysis of arabidopsis circadian clock mutants reveals different scales of transcriptome and proteome regulation. Open Biology 7, (2017).

Ivakov, A., Flis, A., Apelt, F., Fünfgeld, M. F. F., Scherer, U., Stitt, M., Kragler, F., Vissenberg, K., Persson, S. & Suslov, D. Cellulose Synthesis and Cell Expansion Are Regulated by Different Mechanisms in Growing Arabidopsis Hypocotyls. The Plant Cell 29, 1305–1315 (2017).

Flis, A., Sulpice, R., Seaton, D. D., Ivakov, A., Liput, M., Abel, C., Millar, A. J. & Stitt, M. Photoperiod-dependent changes in the phase of core clock transcripts and global transcriptional outputs at dawn and dusk in Arabidopsis. Plant, Cell and Environment 39, 1955–1981 (2016).

Flis, A., Fernandez, A. P., Zielinski, T., Mengin, V., Sulpice, R., Stratford, K., Hume, A., Pokhilko, A., Southern, M. M., Seaton, D. D., McWatters, H. G., Stitt, M., Halliday, K. J. & Millar, A. J. Defining the robust behaviour of the plant clock gene circuit with absolute RNA timeseries and open infrastructure. Open biology 5, (2015).

Chew, Y. H., Wenden, B., Flis, A., Mengin, V., Taylor, J., Davey, C. L., Tindal, C., Thomas, H., Ougham, H. J., de Reffye, P., Stitt, M., Williams, M., Muetzelfeldt, R., Halliday, K. J. & Millar, A. J. Multiscale digital Arabidopsis predicts individual organ and whole-organism growth. Proceedings of the National Academy of Sciences of the United States of America 111, E4127–E4136 (2014).

Mugford, S. T., Fernandez, O., Brinton, J., Flis, A., Krohn, N., Encke, B., Feil, R., Sulpice, R., Lunn, J. E., Stitt, M. & Smith, A. M. Regulatory Properties of ADP Glucose Pyrophosphorylase Are Required for Adjustment of Leaf Starch Synthesis in Different Photoperiods. Plant Physiology 166, 1733–47 (2014).

Pokhilko, A., Flis, A., Sulpice, R., Stitt, M. & Ebenhoh, O. Adjustment of carbon fluxes to light conditions regulates the daily turnover of starch in plants: a computational model. Molecular BioSystems 10, 613–627 (2014).

Sulpice, R., Flis, A., Ivakov, A., Apelt, F., Krohn, N., Encke, B., Abel, C., Feil, R., Lunn, J. E. & Stitt, M. Arabidopsis coordinates the diurnal regulation of carbon allocation and growth across a wide range of photoperiods. Molecular Plant 7, 137–155 (2014).

Riedelsheimer, C., Lisec, J., Czedik-Eysenberg, A., Sulpice, R., Flis, A., Grieder, C., Altmann, T., Stitt, M., Willmitzer, L. & Melchinger, A. E. Genome-wide association mapping of leaf metabolic profiles for dissecting complex traits in maize. Proceedings of the National Academy of Sciences of the United States of America 109, 8872–8877 (2012).