Publications of C. Caldana

Calderan-Rodrigues, M.J.; Luzarowski, M.; Monte Bello, C.C.; Minen, R.I.; Zühlke, B. M.; Nikoloski, Z.; Skirycz, A.; Caldana, C.: Proteogenic Dipeptides Are Characterized by Diel Fluctuations and Target of Rapamycin Complex-Signaling Dependency in the Model Plant Arabidopsis thaliana. Frontiers in Plant Science 12, 758933 (2021)

Dantas, L.L.B.; Dourado, M.M.; de Lima, N.O.; Cavaçana, N.; Nishiyama, M.; Souza, G.M.; Carneiro, M.S.; Caldana, C.; Hotta, C.T.: Field microenvironments regulate crop diel transcript and metabolite rhythms. New Phytologist 232 (4), pp. 1738 - 1749 (2021)

Viana, A. J. C.; Matiolli, C. C.; Newman, D. W.; Vieira, J. G. P.; Duarte, G. T.; Martins, M. C. M.; Gilbault, E.; Hotta, C. T.; Caldana, C.; Vincentz, M.: The sugar-responsive circadian clock regulator bZIP63 modulates plant growth. New Phytologist 231 (5), pp. 1875 - 1889 (2021)

Busso-Lopes, A. F.; Carnielli, C. M.; Winck, F. V.; de Sa Patroni, F. M.; Oliveira, A. K.; Granato, D. C.; Pereira E Costa, R. A.; Domingues, R. R.; Pauletti, B. A.; Riano-Pachon, D. M. et al.; Aricetti, J.; Caldana, C.; Graner, E.; Della Coletta, R.; Dryden, K.; Fox, J. W.; Paes Leme, A. F.: A Reductionist Approach Using Primary and Metastatic Cell-Derived Extracellular Vesicles Reveals Hub Proteins Associated with Oral Cancer Prognosis. Molecular and Cellular Proteomics 20, 100118 (2021)

da Silva, V. C. H.; Martins, M. C. M.; Calderan-Rodrigues, M.J.; Artins, A.; Monte Bello, C.C.; Gupta, S.; Sobreira, T. J. P.; Riano-Pachon, D. M.; Mafra, V.; Caldana, C.: Shedding Light on the Dynamic Role of the "Target of Rapamycin" Kinase in the Fast-Growing C-4 Species Setaria viridis, a Suitable Model for Biomass Crops. Frontiers in Plant Science 12, 637508 (2021)

Caldana, C.; Martins, M. C. M.; Mubeen, U.; Urrea-Castellanos, R.: The magic 'hammer' of TOR: the multiple faces of a single pathway in the metabolic regulation of plant growth and development. Journal of Experimental Botany 70 (8), pp. 2217 - 2225 (2019)

Mubeen, U.; Giavalisco, P.; Caldana, C.: TOR inhibition interrupts the metabolic homeostasis by shifting the carbon-nitrogen balance in Chlamydomonas reinhardtii. Plant Signaling & Behavior 14 (11), 1670595, p. 1670595 (2019)

Webb, A. A. R.; Seki, M.; Satake, A.; Caldana, C.: Continuous dynamic adjustment of the plant circadian oscillator. Nature Communications 10 (1), 550 (2019)

Ferreira, D. A.; Martins, M. C. M.; Cheavegatti-Gianotto, A.; Carneiro, M. S.; Amadeu, R. R.; Aricetti, J. A.; Wolf, L. D.; Hoffmann, H. P.; de Abreu, L. G. F.; Caldana, C.: Metabolite Profiles of Sugarcane Culm Reveal the Relationship Among Metabolism and Axillary Bud Outgrowth in Genetically Related Sugarcane Commercial Cultivars. Frontiers in Plant Science 9, 857 (2018)

Jueppner, J.; Mubeen, U.; Leisse, A.; Caldana, C.; Wiszniewski, A.A.G.; Steinhauser, D.; Giavalisco, P.: The target of rapamycin kinase affects biomass accumulation and cell cycle progression by altering carbon/nitrogen balance in synchronized Chlamydomonas reinhardtii cells. The Plant Journal 93 (2), pp. 355 - 376 (2018)

de Vries, R. P.; Riley, R.; Wiebenga, A.; Aguilar-Osorio, G.; Amillis, S.; Uchima, C. A.; Anderluh, G.; Asadollahi, M.; Askin, M.; Barry, K. et al.; Battaglia, E.; Bayram, O.; Benocci, T.; Braus-Stromeyer, S. A.; Caldana, C.; Canovas, D.; Cerqueira, G. C.; Chen, F.; Chen, W.; Choi, C.; Clum, A.; Correa dos Santos, R. A.; de Lima Damasio, A. R.; Diallinas, G.; Emri, T.; Fekete, E.; Flipphi, M.; Freyberg, S.; Gallo, A.; Gournas, C.; Habgood, R.; Hainaut, M.; Laura Harispe, M.; Henrissat, B.; Hilden, K. S.; Hope, R.; Hossain, A.; Karabika, E.; Karaffa, L.; Karanyi, Z.; Krasevec, N.; Kuo, A.; Kusch, H.; LaButti, K.; Lagendijk, E. L.; Lapidus, A.; Levasseur, A.; Lindquist, E.; Lipzen, A.; Logrieco, A. F.; MacCabe, A.; Makela, M. R.; Malavazi, I.; Melin, P.; Meyer, V.; Mielnichuk, N.; Miskei, M.; Molnar, A. P.; Mule, G.; Ngan, C. Y.; Orejas, M.; Orosz, E.; Ouedraogo, J. P.; Overkamp, K. M.; Park, H.-S.; Perrone, G.; Piumi, F.; Punt, P. J.; Ram, A. F. J.; Ramon, A.; Rauscher, S.; Record, E.; Riano-Pachon, D. M.; Robert, V.; Roehrig, J.; Ruller, R.; Salamov, A.; Salih, N. S.; Samson, R. A.; Sandor, E.; Sanguinetti, M.; Schutze, T.; Sepcic, K.; Shelest, E.; Sherlock, G.; Sophianopoulou, V.; Squina, F.; Sun, H.; Susca, A.; Todd, R. B.; Tsang, A.; Unkles, S. E.; van de Wiele, N.; van Rossen-Uffink, D.; de Castro Oliveira, J. V.; Vesth, T. C.; Visser, J.; Yu, J.-H.; Zhou, M.; Andersen, M. R.; Archer, D. B.; Baker, S. E.; Benoit, I.; Brakhage, A. A.; Braus, G. H.; Fischer, R.; Frisvad, J. C.; Goldman, G. H.; Houbraken, J.; Oakley, B.; Pocsi, I.; Scazzocchio, C.; Seiboth, B.; vanKuyk, P. A.; Wortman, J.; Dyer, P. S.; Grigoriev, I. V.: Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus. Genome Biology 18, 28 (2017)

Jueppner, J.; Mubeen, U.; Leisse, A.; Caldana, C.; Brus, H.; Steup, M.; Herrmann, M.; Steinhauser, D.; Giavalisco, P.: Dynamics of lipids and metabolites during the cell cycle of Chlamydomonas reinhardtii. The Plant Journal 92 (2), pp. 331 - 343 (2017)

Mandelli, F.; Couger, M. B.; Paixao, D. A. A.; Machado, C. B.; Carnielli, C. M.; Aricetti, J. A.; Polikarpov, I.; Prade, R.; Caldana, C.; Paes Leme, A. F. et al.; Mercadante, A. Z.; Riano-Pachon, D. M.; Squina, F. M.: Thermal adaptation strategies of the extremophile bacterium Thermus filiformis based on multi-omics analysis. Extremophiles 21 (4), pp. 775 - 788 (2017)

Schaker, P. D. C.; Peters, L. P.; Cataldi, T. R.; Labate, C. A.; Caldana, C.; Monteiro-Vitorello, C. B.: Metabolome Dynamics of Smutted Sugarcane Reveals Mechanisms Involved in Disease Progression and Whip Emission. Frontiers in Plant Science 8, 882 (2017)

Seki, M.; Ohara, T.; Hearn, T. J.; Frank, A.; da Silva, V. C. H.; Caldana, C.; Webb, A. A. R.; Satake, A.: Adjustment of the Arabidopsis circadian oscillator by sugar signalling dictates the regulation of starch metabolism. Scientific Reports 7 (1), 8305 (2017)

Alves de Castro, P.; dos Reis, T. F.; Dolan, S. K.; Oliveira Manfiolli, A.; Brown, N. A.; Jones, G. W.; Doyle, S.; Riaño-Pachón, D. M.; Squina, F. M.; Caldana, C. et al.; Singh, A.; Del Poeta, M.; Hagiwara, D.; Silva-Rocha, R.; Goldman, G. H.: The Aspergillus fumigatus SchASCH9 kinase modulates SakAHOG1 MAP kinase activity and it is essential for virulence. Molecular Microbiology 102 (4), pp. 642 - 671 (2016)

Jorge, T. F.; Rodrigues, J. A.; Caldana, C.; Schmidt, R.; van Dongen, J. T.; Thomas-Oates, J.; Antonio, C.: Mass spectrometry-based plant metabolomics: Metabolite responses to abiotic stress. Mass Spectrometry Reviews 35 (5), pp. 620 - 649 (2016)

Koelln, O. T.; Junqueira Franco, H. C.; Ferreira, D. A.; Vargas, V. P.; de Quassi Castro, S. A.; Cantarella, H.; Caldana, C.; Ocheuze Trivelin, P. C.: Root extracts of Bracchiaria humidicola and Saccharum spontaneum to increase N use by sugarcane. Scientia Agricola 73 (1), pp. 34 - 42 (2016)

Winck, F. V.; Paez Melo, D. O.; Riano-Pachon, D. M.; Martins, M. C. M.; Caldana, C.; Gonzalez Barrios, A. F.: Analysis of Sensitive CO2 Pathways and Genes Related to Carbon Uptake and Accumulation in Chlamydomonas reinhardtii through Genomic Scale Modeling and Experimental Validation. Frontiers in Plant Science 7, 43 (2016)

Brown, N. A.; dos Reis, T. F.; Ries, L. N. A.; Caldana, C.; Mah, J.-H.; Yu, J.-H.; Macdonald, J. M.; Goldman, G. H.: G-protein coupled receptor-mediated nutrient sensing and developmental control in Aspergillus nidulans. Molecular Microbiology 98 (3), pp. 420 - 439 (2015)