Publikationen von M. Gorka

Zeitschriftenartikel (23)

1.
Zeitschriftenartikel
Aarabi, F., Rakpenthai, A., Barahimipour, R., Gorka, M., Alseekh, S., Zhang, Y. J., Salem, M. A., Brückner, F., Omranian, N., Watanabe, M., Nikoloski, Z., Giavalisco, P., Tohge, T., Graf, A., Fernie, A. R. & Hoefgen, R. Sulfur Deficiency Induced genes affect seed protein accumulation and composition under sulfate deprivation. Plant Physiology (2021). doi:10.1093/plphys/kiab386
2.
Zeitschriftenartikel
Schlossarek, D., Luzarowski, M., Sokolowska, E., Gorka, M., Willmitzer, L. & Skirycz, A. PROMISed: A novel web-based tool to facilitate analysis and visualization of the molecular interaction networks from co-fractionation mass spectrometry (CF-MS) experiments. Computational and Structural Biotechnology Journal 19, 5117–5125 (2021).
3.
Zeitschriftenartikel
Moreno, J. C., Rojas, B. E., Vicente, R., Gorka, M., Matz, T., Kosmacz, M., Peralta-Ariza, J. S., Zhang, Y. J., Alseekh, S., Childs, D., Luzarowski, M., Nikoloski, Z., Zarivach, R., Walther, D., Hartman, M. D., Figueroa, C. M., Iglesias, A. A., Fernie, A. R. & Skirycz, A. Tyr-Asp inhibition of glyceraldehyde 3-phosphate dehydrogenase affects plant redox metabolism. EMBO Journal (2021). doi:10.15252/embj.2020106800
4.
Zeitschriftenartikel
Cheong, B. E., Beine-Golovchuk, O., Gorka, M., Ho, W. W. H., Martinez-Seidel, F., Firmino, A. A. P., Skirycz, A., Roessner, U. & Kopka, J. Arabidopsis REI-LIKE proteins activate ribosome biogenesis during cold acclimation. Scientific Reports 11, (2021).
5.
Zeitschriftenartikel
Friedrich, T., Oberkofler, V., Trindade, I., Altmann, S., Brzezinka, K., Lämke, J., Gorka, M., Kappel, C., Sokolowska, E., Skirycz, A., Graf, A. & Bäurle, I. Heteromeric HSFA2/HSFA3 complexes drive transcriptional memory after heat stress in Arabidopsis. Nature Communications 12, (2021).
6.
Zeitschriftenartikel
Ginsawaeng, O., Gorka, M., Erban, A., Heise, C., Brueckner, F., Hoefgen, R., Kopka, J., Skirycz, A., Hincha, D. K. & Zuther, E. Characterization of the Heat-Stable Proteome during Seed Germination in Arabidopsis with Special Focus on LEA Proteins. International Journal of Molecular Sciences 22, (2021).
7.
Zeitschriftenartikel
Luzarowski, M., Vicente, R., Kiselev, A., Wagner, M., Schlossarek, D., Erban, A., de Souza, L. P., Childs, D., Wojciechowska, I., Luzarowska, U., Gorka, M., Sokolowska, E., Kosmacz, M., Moreno, J. C., Brzezinska, A., Vegesna, B., Kopka, J., Fernie, A. R., Willmitzer, L., Ewald, J. C. & Skirycz, A. Global mapping of protein–metabolite interactions in Saccharomyces cerevisiae reveals that Ser-Leu dipeptide regulates phosphoglycerate kinase activity. Communications Biology 4, (2021).
8.
Zeitschriftenartikel
Martinez-Seidel, F., Beine-Golovchuk, O., Hsieh, Y.-C., El Eshraky, K., Gorka, M., Cheong, B.-E., Jimenez‐posada, E. V., Walther, D., Skirycz, A., Roessner, U., Kopka, J. & Firmino, A. A. P. Spatially enriched paralog rearrangements argue functionally diverse ribosomes arise during cold acclimation in arabidopsis. International Journal of Molecular Sciences 22, (2021).
9.
Zeitschriftenartikel
Schlossarek, D., Luzarowski, M., Sokolowska, E., Gorka, M., Willmitzer, L. & Skirycz, A. PROMISed: A novel web-based tool to facilitate analysis and visualization of the molecular interaction networks from co-fractionation mass spectrometry (CF-MS) experiments. Computational and Structural Biotechnology Journal (2021). doi:10.1016/j.csbj.2021.08.042
10.
Zeitschriftenartikel
Firmino, A. A. P., Gorka, M., Graf, A., Skirycz, A., Martinez-Seidel, F., Zander, K., Kopka, J. & Beine-Golovchuk, O. Separation and paired proteome profiling of plant chloroplast and cytoplasmic ribosomes. Plants 9, (2020).
11.
Zeitschriftenartikel
Thirumalaikumar, V. P., Gorka, M., Schulz, K., Masclaux-Daubresse, C., Sampathkumar, A., Skirycz, A., Vierstra, R. D. & Balazadeh, S. Selective autophagy regulates heat stress memory in Arabidopsis by NBR1-mediated targeting of HSP90 and ROF1. Autophagy (2020). doi:10.1080/15548627.2020.1820778
12.
Zeitschriftenartikel
Urrea Castellanos, R., Friedrich, T., Petrovic, N., Altmann, S., Brzezinka, K., Gorka, M., Graf, A. & Bäurle, I. FORGETTER2 protein phosphatase and phospholipase D modulate heat stress memory in Arabidopsis. The Plant Journal 104, 7–17 (2020).
13.
Zeitschriftenartikel
Burschel, S., Kreuzer Decovic, D., Nuber, F., Stiller, M., Hofmann, M., Zupok, A., Siemiatkowska, B., Gorka, M., Leimkühler, S. & Friedrich, T. Iron-sulfur cluster carrier proteins involved in the assembly of Escherichia coli NADH: ubiquinone oxidoreductase (complex I). Molecular Microbiology 111, 31–45 (2019).
14.
Zeitschriftenartikel
Gorka, M., Swart, C., Siemiatkowska, B., Martínez-Jaime, S., Skirycz, A., Streb, S. & Graf, A. Protein Complex Identification and quantitative complexome by CN-PAGE. Scientific Reports 9, (2019).
15.
Zeitschriftenartikel
Kosmacz, M., Gorka, M., Schmidt, S., Luzarowski, M., Moreno, J. C., Szlachetko, J., Leniak, E., Sokolowska, E., Sofroni, K., Schnittger, A. & Skirycz, A. Protein and metabolite composition of Arabidopsis stress granules. New Phytologist 222, 1420–1433 (2019).
16.
Zeitschriftenartikel
Takahashi, D., Gorka, M., Erban, A., Graf, A., Kopka, J., Zuther, E. & Hincha, D. K. Both cold and sub-zero acclimation induce cell wall modification and changes in the extracellular proteome in Arabidopsis thaliana. Scientific Reports 9, (2019).
17.
Zeitschriftenartikel
Zupok, A., Gorka, M., Siemiatkowska, B., Skirycz, A. & Leimkuehler, S. Iron-Dependent Regulation of Molybdenum Cofactor Biosynthesis Genes in Escherichia coli. Journal of Bacteriology 201, (2019).
18.
Zeitschriftenartikel
Kosmacz, M., Luzarowski, M., Kerber, O., Leniak, E., Gutierrez-Beltran, E., Moreno, J. C., Gorka, M., Szlachetko, J., Veyel, D., Graf, A. & Skirycz, A. Interaction of 2 ',3 '-cAMP with Rbp47b Plays a Role in Stress Granule Formation. Plant Physiology 177, 411–421 (2018).
19.
Zeitschriftenartikel
Swart, C., Martínez-Jaime, S., Gorka, M., Zander, K. & Graf, A. Hit-Gel: Streamlining in-gel protein digestion for high-throughput proteomics experiments. Scientific Reports 8, (2018).
20.
Zeitschriftenartikel
Veyel, D., Sokolowska, E., Moreno, J. C., Kierszniowska, S., Cichon, J., Wojciechowska, I., Luzarowski, M., Kosmacz, M., Szlachetko, J., Gorka, M., Meret, M., Graf, A., Meyer, E. H., Willmitzer, L. & Skirycz, A. PROMIS, global analysis of PROtein-metabolite interactions using size separation in Arabidopsis thaliana. The Journal of Biological Chemistry 293, 12440–12453 (2018).
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