Publications of A. R. Fernie

Lima, V. F.; Erban, A.; Daubermann, A. G.; Freire, F. B. S.; Porto, N. P.; Cândido-Sobrinho, S. A.; Medeiros, D.B.; Schwarzländer, M.; Fernie, A. R.; dos Anjos, L. et al.; Kopka, J.; Daloso, D. M.: Establishment of a GC-MS-based 13C-positional isotopomer approach suitable for investigating metabolic fluxes in plant primary metabolism. The Plant Journal (2021)

Zhang, F.; Wu, J.; Sade, N.; Wu, S.; Egbaria, A.; Fernie, A. R.; Yan, J.; Qin, F.; Chen, W.; Brotman, Y. et al.; Dai, M.: Genomic basis underlying the metabolome-mediated drought adaptation of maize. Genome Biology 22 (1), 260 (2021)

Aarabi, F.; Rakpenthai, A.; Barahimipour, R.; Gorka, M.; Alseekh, S.; Zhang, Y.; Salem, M.A.; Brückner, F.; Omranian, N.; Watanabe, M. et al.; Nikoloski, Z.; Giavalisco, P.; Tohge, T.; Graf, A.; Fernie, A. R.; Hoefgen, R.: Sulfur Deficiency Induced genes affect seed protein accumulation and composition under sulfate deprivation. Plant Physiology (2021)

Zhang, Y.; Scossa, Federico, F.; Fernie, A. R.: The genomes of Taxus species unveil novel candidates in the biosynthesis of taxoids. Molecular Plant (2021)

Bellucci, E.; Aguilar, O. M.; Alseekh, S.; Bett, K.; Brezeanu, C.; Cook, D.; De la Rosa, L.; Delledonne, M.; Dostatny, D. F.; Ferreira, J. J. et al.; Geffroy, V.; Ghitarrini, S.; Kroc, M.; Kumar Agrawal, S.; Logozzo, G.; Marino, M.; Mary-Huard, T.; McClean, P.; Meglič, V.; Messer, T.; Muel, F.; Nanni, L.; Neumann, K.; Servalli, F.; Străjeru, S.; Varshney, R. K.; Vasconcelos, M. W.; Zaccardelli, M.; Zavarzin, A.; Bitocchi, E.; Frontoni, E.; Fernie, A. R.; Gioia, T.; Graner, A.; Guasch, L.; Prochnow, L.; Opperman, M.; Susek, K.; Tenaillon, M.; Papa, R.: The INCREASE project: Intelligent Collections of Food-Legume Genetic Resources for European Agrofood Systems. The Plant Journal (2021)

Wu, T.; Kerbler, S. M.; Fernie, A. R.; Zhang, Y.: Plant cell cultures as heterologous bio-factories for secondary metabolite production. Plant Communications, 100235 (2021)

Zhu, F.; Fernie, A. R.: Plants upcycle gene functions to suit their roots. Trends in Plant Science 26 (10), pp. 996 - 998 (2021)

Alseekh, S.; Aharoni, A.; Brotman, Y.; Contrepois, K.; D’Auria, J.; Ewald, J.; C. Ewald, J.; Fraser, P. D.; Giavalisco, P.; Hall, R. D. et al.; Heinemann, M.; Link, H.; Luo, J.; Neumann, S.; Nielsen, J.; de Souza, L. P.; Saito, K.; Sauer, U.; Schroeder, F. C.; Schuster, S.; Siuzdak, G.; Skirycz, A.; Sumner, L. W.; Snyder, M. P.; Tang, H.; Tohge, T.; Wang, Y.; Wen, W.; Wu, S.; Xu, G.; Zamboni, N.; Fernie, A. R.: Mass spectrometry-based metabolomics: a guide for annotation, quantification and best reporting practices. Nature Methods 18 (7), pp. 747 - 756 (2021)

Guadalupe Dominguez, P.; Conti, G.; Duffy, T.; Insani, M.; Alseekh, S.; Asurmendi, S.; Fernie, A. R.; Carrari, F.: Multi-omics analyses reveal the roles of the ASR1 transcription factor in tomato fruits. Journal of Experimental Botany (2021)

Moreno, J.C.; Rojas, B.E.; Vicente, R.; Gorka, M.; Matz, T.; Kosmacz, M.; Peralta-Ariza, J.S.; Zhang, Y.; Alseekh, S.; Childs, D. et al.; Luzarowski, M.; Nikoloski, Z.; Zarivach, R.; Walther, D.; Hartman, M.D.; Figueroa, C.M.; Iglesias, A.A.; Fernie, A. R.; Skirycz, A.: Tyr-Asp inhibition of glyceraldehyde 3-phosphate dehydrogenase affects plant redox metabolism. EMBO Journal, e106800 (2021)

Altman, A.; Fan, L.; Foyer, C.; Cowling, W.; Mittler, R.; Qaim, M.; Weber, A.; Reynolds, M.; Varshney, R.; Fernie, A. R.: Past and Future Milestones of Plant Breeding. Trends in Plant Science 26 (6), pp. 530 - 538 (2021)

Ancín, M.; Larraya, L.; Florez-Sarasa, I. D.; Bénard, C.; Fernández-San Millán, A.; Veramendi, J.; Gibon, Y.; Fernie, A. R.; Aranjuelo, I.; Farran, I.: Thioredoxin m overexpression in chloroplasts alters carbon and nitrogen partitioning in tobacco plants. Journal of Experimental Botany (2021)

Ashraf, M.; Mao, Q.; Hong, J.; Shi, L.; Ran, X.; Liaquat, F.; Uzair, M.; Liang, W.; Fernie, A. R.; Shi, J.: HSP70-16 and VDAC3 jointly inhibit seed germination under cold stress in Arabidopsis. Plant, Cell and Environment (2021)

Zimmermann, S. E.; Benstein, R. M.; Flores-Tornero, M.; Blau, S.; Anoman, A. D.; Rosa-Téllez, S.; Gerlich, S. C.; Salem, M.A.; Alseekh, S.; Kopriva, S. et al.; Wewer, V.; Flügge, U.-I.; Jacoby, R. P.; Fernie, A. R.; Giavalisco, P.; Ros, R.; Krueger, S.: The phosphorylated pathway of serine biosynthesis links plant growth with nitrogen metabolism. Plant Physiology 186 (3), pp. 1487 - 1506 (2021)

de Souza, L. P.; Alseekh, S.; Scossa, F.; Fernie, A. R.: Ultra-high-performance liquid chromatography high-resolution mass spectrometry variants for metabolomics research. Nature Methods 18, pp. 733 - 746 (2021)

Borghi, M.; Fernie, A. R.: From flowers to seeds: how the metabolism of flowers frames plant reproduction. The biochemist: the bulletin of the Biochemical Society 43 (3), pp. 14 - 18 (2021)

Cortinovis, G.; Oppermann, M.; Neumann, K.; Graner, A.; Gioia, T.; Marsella, M.; Alseekh, S.; Fernie, A. R.; Papa, R.; Bellucci, E. et al.; Bitocchi, E.: Towards the Development, Maintenance, and Standardized Phenotypic Characterization of Single-Seed-Descent Genetic Resources for Common Bean. Current Protocols in Plant Biology 1 (5), e133 (2021)

Fernie, A. R.: Associating primary and specialized metabolism with salt induced osmotic stress tolerance in maize. New Phytologist 230 (6), pp. 2991 - 2093 (2021)

Zhang, Y.; Giese, J.; Kerbler, S.M.-L.; Siemiatkowska, B.; de Souza, L. P.; Alpers, J.; Medeiros, D.B.; Hincha, D. K.; Daloso, D. M.; Stitt, M. et al.; Finkemeier, I.; Fernie, A. R.: Two mitochondrial phosphatases, PP2c63 and Sal2, are required for posttranslational regulation of the TCA cycle in Arabidopsis. Molecular Plant 14 (7), pp. 1104 - 1118 (2021)

Baptistella, J. L. C.; Llerena, J. P. P.; Domingues-Júnior, A. P.; Fernie, A. R.; Favarin, J. L.; Mazzafera, P.: Differential responses of three Urochloa species to low phosphorus availability. Annals of Applied Biology 179 (2), pp. 216 - 230 (2021)