Publications of A. Skirycz

Cheong, B.E.; Beine-Golovchuk, O.; Gorka, M.; Ho, W.W.H.; Martinez-Seidel, F.; Firmino, A.; Skirycz, A.; Roessner, U.; Kopka, J.: Arabidopsis REI-LIKE proteins activate ribosome biogenesis during cold acclimation. Scientific Reports 11 (1), 2410 (2021)

Friedrich, T.; Oberkofler, V.; Trindade, I.; Altmann, S.; Brzezinka, K.; Lämke, J.; Gorka, M.; Kappel, C.; Sokolowska, E.; Skirycz, A. et al.; Graf, A.; Bäurle, I.: Heteromeric HSFA2/HSFA3 complexes drive transcriptional memory after heat stress in Arabidopsis. Nature Communications 12 (1), 3426 (2021)

Ginsawaeng, O.; Gorka, M.; Erban, A.; Heise, C.; Brueckner, F.; Hoefgen, R.; Kopka, J.; Skirycz, A.; Hincha, D. K.; Zuther, E.: Characterization of the Heat-Stable Proteome during Seed Germination in Arabidopsis with Special Focus on LEA Proteins. International Journal of Molecular Sciences 22 (15), 8172 (2021)

Luzarowski, M.; Vicente, R.; Kiselev, A.; Wagner, M.; Schlossarek, D.; Erban, A.; de Souza, L. P.; Childs, D.; Wojciechowska, I.; Luzarowska, U. et al.; Gorka, M.; Sokolowska, E.; Kosmacz, M.; Moreno, J.C.; Brzezinska, A.; Vegesna, B.; Kopka, J.; Fernie, A. R.; Willmitzer, L.; Ewald, J. C.; Skirycz, A.: Global mapping of protein–metabolite interactions in Saccharomyces cerevisiae reveals that Ser-Leu dipeptide regulates phosphoglycerate kinase activity. Communications Biology 4 (1), 181 (2021)

Martinez-Seidel, F.; Beine-Golovchuk, O.; Hsieh, Y.-C.; El Eshraky, K.; Gorka, M.; Cheong, B.-E.; Jimenez‐posada, E.V.; Walther, D.; Skirycz, A.; Roessner, U. et al.; Kopka, J.; Firmino, A.: Spatially enriched paralog rearrangements argue functionally diverse ribosomes arise during cold acclimation in arabidopsis. International Journal of Molecular Sciences 22 (11), 6160 (2021)

Omidbakhshfard, M. A.; Sokolowska, E.; Di Vittori, V.; de Souza, L. P.; Kuhalskaya, A.; Brotman, Y.; Alseekh, S.; Fernie, A. R.; Skirycz, A.: Multi-omics analysis of early leaf development in Arabidopsis thaliana. Patterns 2 (4), 100235 (2021)

Razaghi-Moghadam, Z.; Sokolowska, E.; Sowa, M.A.; Skirycz, A.; Nikoloski, Z.: Combination of network and molecule structure accurately predicts competitive inhibitory interactions. Computational and Structural Biotechnology Journal 19, pp. 2170 - 2178 (2021)

Thirumalaikumar, V. P.; Wagner, M.; Balazadeh, S.; Skirycz, A.: Autophagy is responsible for the accumulation of proteogenic dipeptides in response to heat stress in Arabidopsis thaliana. The FEBS Journal 288 (1), pp. 281 - 292 (2021)

Uflewski, M.; Mielke, S.; Correa Galvis, V.; von Bismarck, T.; Chen, X.; Tietz, E.; Ruß, J.; Luzarowski, M.; Sokolowska, E.; Skirycz, A. et al.; Eirich, J.; Finkemeier, I.; Schöttler, M. A.; Armbruster, U.: Functional characterization of proton antiport regulation in the thylakoid membrane. Plant Physiology 187 (4), pp. 2209 - 2229 (2021)

Chodasiewicz, M.; Sokolowska, E.; Nelson-Dittrich, A. C.; Masiuk, A.; Moreno, J.C.; Nelson, A. D. L.; Skirycz, A.: Identification and Characterization of the Heat-Induced Plastidial Stress Granules Reveal New Insight Into Arabidopsis Stress Response. Frontiers in Plant Science 11, 597592 (2020)

Firmino, A.; Gorka, M.; Graf, A.; Skirycz, A.; Martinez-Seidel, F.; Zander, K.; Kopka, J.; Beine-Golovchuk, O.: Separation and paired proteome profiling of plant chloroplast and cytoplasmic ribosomes. Plants 9 (7), 892 (2020)

Kosmacz, M.; Skirycz, A.: The Isolation of Stress Granules From Plant Material. Current Protocols in Plant Biology 5 (3), e20118 (2020)

Lechowicz, K.; Pawłowicz, I.; Perlikowski, D.; Arasimowicz-Jelonek, M.; Blicharz, S.; Skirycz, A.; Augustyniak, A.; Malinowski, R.; Rapacz, M.; Kosmala, A.: Adjustment of Photosynthetic and Antioxidant Activities to Water Deficit Is Crucial in the Drought Tolerance of Lolium multiflorum/Festuca arundinacea Introgression Forms. International Journal of Molecular Sciences 21 (16), 5639 (2020)

Perlikowski, D.; Augustyniak, A.; Skirycz, A.; Pawłowicz, I.; Masajada, K.; Eckhardt, Ä.; Kosmala, A.: Efficient root metabolism improves drought resistance of Festuca arundinacea. Plant and Cell Physiology 61 (3), pp. 492 - 504 (2020)

Thirumalaikumar, V. P.; Gorka, M.; Schulz, K.; Masclaux-Daubresse, C.; Sampathkumar, A.; Skirycz, A.; Vierstra, R. D.; Balazadeh, S.: Selective autophagy regulates heat stress memory in Arabidopsis by NBR1-mediated targeting of HSP90 and ROF1. Autophagy 19 (9), pp. 2184 - 2199 (2020)

Zhang, Y.; Skirycz, A.; Fernie, A. R.: An Abundance and Interaction Encyclopedia of Plant Protein Function. Trends in Plant Science 25 (7), pp. 627 - 630 (2020)

Gorka, M.; Swart, C.; Siemiatkowska, B.; Martínez-Jaime, S.; Skirycz, A.; Streb, S.; Graf, A.: Protein Complex Identification and quantitative complexome by CN-PAGE. Scientific Reports 9 (1), 11523 (2019)

Kosmacz, M.; Gorka, M.; Schmidt, S.; Luzarowski, M.; Moreno, J.C.; Szlachetko, J.; Leniak, E.; Sokolowska, E.; Sofroni, K.; Schnittger, A. et al.; Skirycz, A.: Protein and metabolite composition of Arabidopsis stress granules. New Phytologist 222 (3), pp. 1420 - 1433 (2019)

Luzarowski, M.; Skirycz, A.: Emerging strategies for the identification of protein-metabolite interactions. Journal of Experimental Botany 70 (18), pp. 4605 - 4618 (2019)

Perlikowski, D.; Augustyniak, A.; Masajada, K.; Skirycz, A.; Soja, A. M.; Eckhardt, Ä.; Wolter, G.; Kosmala, A.: Structural and metabolic alterations in root systems under limited water conditions in forage grasses of Lolium-Festuca complex. Plant Science 283, pp. 211 - 223 (2019)