Publications of J. Selbig

Hummel, J.; Selbig, J.; Walther, D.; Kopka, J.: The Golm Metabolome Database: a database for GC-MS based metabolite profiling. In: Metabolomics: A Powerful Tool in Systems Biology, pp. 75 - 95 (Eds. Nielsen, J.; Jewett, M.). Springer-Verlag, Berlin, Heidelberg, New York (2007)

Redestig, H.; Sohler, F.; Zimmer, R.; Selbig, J.: Unsupervised Decision Trees Structured by Gene Ontology (GO-UDTs) for the Interpretation of Microarray Data. In: Advances in Data Analysis, pp. 585 - 592 (Eds. Decker, R.; Lenz, H. -.). Springer-Verlag, Berlin, Heidelberg (2007)

Scholz, M.; Selbig, J.: Visualisation and Analysis of Molecular Data. In: Metabolomics: Methods and Protocols, pp. 87 - 104 (Ed. Weckwerth, W.). Humana Press Inc., Totowa, NJ, USA (2007)

Steinfath, M.; Repsilber, D.; Scholz, M.; Walther, D.; Selbig, J.: Integrated data analysis for genome-wide research. In: Plant Systems Biology, pp. 309 - 329 (Eds. Baginski, S.; Fernie, A.). Birkhäuser Verlag, Basel, Boston, Berlin (2007)

Steuer, R.; Morgenthal, K.; Weckwerth, W.; Selbig, J.: A gentle guide to the analysis of metabolomic data. In: Metabolomics: Methods and Protocols, pp. 105 - 126 (Ed. Weckwerth, W.). Humana Press Inc., Totowa, NJ, USA (2007)

Roomp, K.; Beerenwinkel, N.; Sing, T.; Schuelter, E.; Buech, J.; Sierra-Aragon, S.; Daeumer, M.; Hoffmann, D.; Kaiser, R.; Lengauer, T. et al.; Selbig, J.: Arevir: a secure platform for designing personalized antiretroviral therapies against HIV. In: Lecture Notes in Bioinformatics, pp. 185 - 194 (Eds. Leser, U.; Naumann, F.; Eckman, B.). Springer-Verlag, Berlin, Heidelberg (2006)

Steinfath, M.; Scholz, M.; Selbig, J.: Profile data analysis: missing value estimation, dimension reduction, clustering, and classification. In: European Training and Network Activity: Plant Genomics and Bioinformatics - Expression Micro Arrays and Beyong: a course book., pp. 193 - 200 (Ed. Freitag, J.). Max-Planck-Institute of Molecular Plant Physiology, Potsdam, GER (2006)

Kloska, S.; Krueger, P.; Selbig, J.: Lotus japonicus expression database. In: Lotus japonicus handbook, pp. 149 - 154 (Ed. Marques, A. J.). Springer-Verlag, Dordrecht, NED (2005)

Larhlimi, A.; Basler, G.; Grimbs, S.; Selbig, J.; Nikoloski, Z.: Stoichiometric capacitance reveals the theoretical capabilities of metabolic networks. In: 11th European Conference on Computational Biology (ECCB) / Conference of the Intelligent Systems in Molecular Biology (ISMB), pp. I502 - I508. 11th European Conference on Computational Biology (ECCB) / Conference of the Intelligent Systems in Molecular Biology (ISMB) , Basel, SWITZERLAND. (2012)

Basler, G.; Grimbs, S.; Selbig, J.; Nikoloski, Z.: Thermodynamic landscapes of randomized large-scale metabolic networks. In: 7th International Workshop on Computational Systems Biology, WCSB 2010, pp. 23 - 26 (Eds. Nykter, M.; Ruusuvuori, P.; Carlberg, C.; Yli-Harja, O.). 7th International Workshop on Computational Systems Biology, WCSB 2010, Luxembourg, LUX. Tampere International Center for Signal Processing (2010)

Grell, S.; Schaub, T.; Selbig, J.: Modelling biological networks by action languages via answer set programming. In: Twenty Second International Conference on Logic Programming (ICLP), pp. 285 - 299. Twenty Second International Conference on Logic Programming (ICLP), Seattle, Washington, USA. Springer, Heidelberg, Berlin (2006)

Fluck, J.; Stitt, M.; Selbig, J.; Hofmann, M.; Thimm, O.: Using named entity recognition for ontology annotation: An experimental approach for Arabidopsis functional genome annotation. In: ECCB'05 Workshop on Biomedical Ontologies and Text Processing. ECCB'05 Workshop on Biomedical Ontologies and Text Processing, Madrid, ESP. (2005)

Beerenwinkel, N.; Rahnenfuehrer, J.; Daeumer, M.; Hoffmann, D.; Kaiser, R.; Selbig, J.; Lengauer, T.: Learning multiple evolutionary pathways from cross-sectional data. In: Eighth annual international conference on Computational molecular biology (RECOMB) 2004, pp. 36 - 44. Eighth annual international conference on Computational molecular biology (RECOMB) 2004, San Diego, California, USA. (2004)

Floeter, A.; Nicolas, J.; Schaub, T.; Selbig, J.: Threshold extraction in metabolite concentration data. In: Bioinformatics, pp. 1491 - 1494. Bioinformatics. (2004)

Scholz, M.; Gibon, Y.; Stitt, M.; Selbig, J.: Independent Component Analysis of starch deficient pgm mutants. In: German Conference on Bioinformatics, pp. 95 - 104. German Conference on Bioinformatics, Bielefeld. (2004)

Selbig, J.: Recent progress in protein secondary structure prediction. In: Recent Research Developments in Protein Folding, Stability and Design, Research Signpost, pp. 93 - 104 (Eds. Gromiha, M.; Selvaraj, S.). Recent Research Developments in Protein Folding, Stability and Design, Research Signpost, Kerala, India. (2002)

Steuer, R.; Kurths, J.; Daub, C. O.; Weise, J.; Selbig, J.: The mutual information: Detecting and evaluating dependencies between variables. In: European Conference on Computational Biology (ECCB 2002), pp. S231 - S240. European Conference on Computational Biology (ECCB 2002), SAARBRUCKEN, GERMANY. (2002)

Beerenwinkel, N.; Schmidt, B.; Walter, H.; Kaiser, R.; Lengauer, T.; Hoffmann, D.; Korn, K.; Selbig, J.: Identifying drug resistance-associated patterns in HIV genotypes. In: German Conference on Bioinformatics, pp. 126 - 130 (Ed. Wingender, E.,. H. R.,. L. I.). German Conference on Bioinformatics, Braunschweig, Germany. (2001)

Kempkensteffen, C.; Catchpole, G.; Platzer, A.; Selbig, J.; Willmitzer, L.; Hinz, S.; Christoph, F.; Miller, K.; Weikert, S.: Metabolic Profiling of Non-Metastatic as Compared to Metastatic Renal Cell Carcinomas. In Journal of Urology, 181 (4), p. 39 - 39. (2009)

Meyer, R. C.; Lisec, J.; Sulpice, R.; Steinfath, M.; Gaertner, T.; Becher, M.; Witucka-Wall, H.; von Korff, M.; Gunther, T.; Childs, L. et al.; Scharr, H.; Walter, A.; Torjek, O.; Fiehn, O.; Schurr, U.; Schmid, K.; Walther, D.; Gibon, Y.; Selbig, J.; Stitt, M.; Willmitzer, L.; Altmann, T.: Analysis of Arabidopsis natural variation in biomass accumulation and metabolism. In New Biotechnology, 25, p. S307 - S307. (2009)