Publikationen von Alisdair Fernie | Max-Planck-Institut für Molekulare Pflanzenphysiologie

Max-Planck-Institut für Molekulare Pflanzenphysiologie

Zeitschriftenartikel (858)

751.

Zeitschriftenartikel

Alhagdow, M.; Mounet, F.; Gilbert, L.; Nunes-Nesi, A.; Garcia, V.; Just, D.; Petit, J.; Beauvoit, B.; Fernie, A. R.; Rothan, C. et al.; Baldet, P.: Silencing of the mitochondrial ascorbate synthesizing enzyme L-galactono-1,4-lactone dehydrogenase affects plant and fruit development in tomato(1[w][OA]). Plant Physiology 145 (4), S. 1408 - 1422 (2007)

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752.

Zeitschriftenartikel

Baxter, C. J.; Liu, J. L.; Fernie, A. R.; Sweetlove, L. J.: Determination of metabolic fluxes in a non-steady-state system. Phytochemistry 68 (16-18), S. 2313 - 2319 (2007)

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753.

Zeitschriftenartikel

Baxter, C. J.; Redestig, H.; Schauer, N.; Repsilber, D.; Patil, K. R.; Nielsen, J.; Selbig, J.; Liu, J. L.; Fernie, A. R.; Sweetlove, L. J.: The metabolic response of heterotrophic Arabidopsis cells to oxidative stress. Plant Physiology 143 (1), S. 312 - 325 (2007)

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754.

Zeitschriftenartikel

Ding, L.; Hofius, D.; Hajirezaei, M.-R.; Fernie, A. R.; Bornke, F.; Sonnewald, U.: Functional analysis of the essential bifunctional tobacco enzyme 3-dehydroquinate dehydratase/shikimate dehydrogenase in transgenic tobacco plants. Journal of Experimental Botany 58 (8), S. 2053 - 2067 (2007)

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755.

Zeitschriftenartikel

Fahnenstich, H.; Saigo, M.; Niessen, M.; Zanor, M. I.; Andreo, C. S.; Fernie, A. R.; Drincovich, M. F.; Flugge, U. I.; Maurino, V. G.: Alteration of organic acid metabolism in Arabidopsis overexpressing the maize C(4)NADP-malic enzyme causes accelerated senescence during extended darkness. Plant Physiology 145 (3), S. 640 - 652 (2007)

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756.

Zeitschriftenartikel

Fernie, A. R.: The future of metabolic phytochemistry: Larger numbers of metabolites, higher resolution, greater understanding. Phytochemistry 68 (22-24), S. 2861 - 2880 (2007)

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757.

Zeitschriftenartikel

Footitt, S.; Dietrich, D.; Fait, A.; Fernie, A. R.; Holdsworth, M. J.; Baker, A.; Theodoulou, F. L.: The COMATOSE ATP-binding cassette transporter is required for full fertility in arabidopsis. Plant Physiology 144 (3), S. 1467 - 1480 (2007)

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758.

Zeitschriftenartikel

Frankel, N.; Nunes-Nesi, A.; Balbo, I.; Mazuch, J.; Centeno, D.; Iusem, N. D.; Fernie, A. R.; Carrari, F.: ci21A/Asr1 expression influences glucose accumulation in potato tubers. Plant Molecular Biology 63 (5), S. 719 - 730 (2007)

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759.

Zeitschriftenartikel

Graham, J. W.; Williams, T. C.; Morgan, M.; Fernie, A. R.; Ratcliffe, R. G.; Sweetlove, L. J.: Glycolytic enzymes associate dynamically with mitochondria in response to respiratory demand and support substrate channeling. Plant Cell 19 (11), S. 3723 - 3738 (2007)

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760.

Zeitschriftenartikel

Lemaitre, T.; Urbanczyk-Wochniak, E.; Flesch, V.; Bismuth, E.; Fernie, A. R.; Hodges, M.: NAD-dependent isocitrate dehydrogenase mutants of arabidopsis suggest the enzyme is not limiting for nitrogen assimilation. Plant Physiology 144 (3), S. 1546 - 1558 (2007)

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761.

Zeitschriftenartikel

Lytovchenko, A.; Sonnewald, U.; Fernie, A. R.: The complex network of non-cellulosic carbohydrate metabolism. Current Opinion in Plant Biology 10 (3), S. 227 - 235 (2007)

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762.

Zeitschriftenartikel

Messerli, G.; Nia, V. P.; Trevisan, M.; Kolbe, A.; Schauer, N.; Geigenberger, P.; Chen, J. C.; Davison, A. C.; Fernie, A. R.; Zeeman, S. C.: Rapid classification of phenotypic mutants of arabidopsis via metabolite fingerprinting. Plant Physiology 143 (4), S. 1484 - 1492 (2007)

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763.

Zeitschriftenartikel

Nunes-Nesi, A.; Carrari, F.; Gibon, Y.; Sulpice, R.; Lytovchenko, A.; Fisahn, J.; Graham, J.; Ratcliffe, R. G.; Sweetlove, L. J.; Fernie, A. R.: Deficiency of mitochondrial fumarase activity in tomato plants impairs photosynthesis via an effect on stomatal function. Plant Journal 50 (6), S. 1093 - 1106 (2007)

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764.

Zeitschriftenartikel

Nunes-Nesi, A.; Sweetlove, L. J.; Fernie, A. R.: Operation and function of the tricarboxylic acid cycle in the illuminated leaf. Physiologia Plantarum 129 (1), S. 45 - 56 (2007)

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765.

Zeitschriftenartikel

Raschke, M.; Buerkle, L.; Mueller, N.; Nunes-Nesi, A.; Fernie, A. R.; Arigoni, D.; Amrhein, N.; Fitzpatrick, T. B.: Vitamin B1 biosynthesis in plants requires the essential iron sulfur cluster protein, THIC. Proceedings of the National Academy of Sciences of the United States of America 104 (49), S. 19637 - 19642 (2007)

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766.

Zeitschriftenartikel

Saladie, M.; Matas, A. J.; Isaacson, T.; Jenks, M. A.; Goodwin, S. M.; Niklas, K. J.; Xiaolin, R.; Labavitch, J. M.; Shackel, K. A.; Fernie, A. R. et al.; Lytovchenko, A.; O'Neill, M. A.; Watkins, C. B.; Rose, J. K. C.: A reevaluation of the key factors that influence tomato fruit softening and integrity. Plant Physiology 144 (2), S. 1012 - 1028 (2007)

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767.

Zeitschriftenartikel

Semel, Y.; Schauer, N.; Roessner, U.; Zamir, D.; Fernie, A. R.: Metabolite analysis for the comparison of irrigated and non-irrigated field grown tomato of varying genotype. Metabolomics 3 (3), S. 289 - 295 (2007)

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768.

Zeitschriftenartikel

Steuer, R.; Nesi, A. N.; Fernie, A. R.; Gross, T.; Blasius, B.; Selbig, J.: From structure to dynamics of metabolic pathways: application to the plant mitochondrial TCA cycle. Bioinformatics 23 (11), S. 1378 - 1385 (2007)

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769.

Zeitschriftenartikel

Studart-Guimaraes, C.; Fait, A.; Nunes-Nesi, A.; Carrari, F.; Usadel, B.; Fernie, A. R.: Reduced Expression of Succinyl CoA Ligase can be Compensated for by an Upregulation of the {gamma}-amino-butyrate (GABA) Shunt in Illuminated Tomato Leaves. Plant Physiology 145 (3), S. 626 - 639 (2007)

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770.

Zeitschriftenartikel

Sweetlove, L. J.; Fait, A.; Nunes-Nesi, A.; Williams, T.; Fernie, A. R.: The mitochondrion: An integration point of cellular metabolism and signalling. Critical Reviews in Plant Sciences 26 (1), S. 17 - 43 (2007)

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771.

Zeitschriftenartikel

Szymanski, J.; Bielecka, M.; Carrari, F.; Fernie, A. R.; Hoefgen, R.; Nikiforova, V. J.: On the processing of metabolic information through metabolite-gene communication networks: an approach for modelling causality. Phytochemistry 68 (16-18), S. 2163 - 2175 (2007)

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772.

Zeitschriftenartikel

Carrari, F.; Baxter, C.; Usadel, B.; Urbanczyk-Wochniak, E.; Zanor, M. I.; Nunes-Nesi, A.; Nikiforova, V.; Centero, D.; Ratzka, A.; Pauly, M. et al.; Sweetlove, L. J.; Fernie, A. R.: Integrated analysis of metabolite and transcript levels reveals the metabolic shifts that underlie tomato fruit development and highlight regulatory aspects of metabolic network behavior. Plant Physiology 142 (4), S. 1380 - 1396 (2006)

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773.

Zeitschriftenartikel

Carrari, F.; Fernie, A. R.: Metabolic regulation underlying tomato fruit development. Journal of Experimental Botany 57 (9), S. 1883 - 1897 (2006)

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774.

Zeitschriftenartikel

Fait, A.; Angelovici, R.; Less, H.; Ohad, I.; Urbanczyk-Wochniak, E.; Fernie, A. R.; Galili, G.: Arabidopsis seed development and germination is associated with temporally distinct metabolic switches. Plant Physiology 142 (3), S. 839 - 854 (2006)

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775.

Zeitschriftenartikel

Farre, E. M.; Tech, S.; Trethewey, R. N.; Fernie, A. R.; Willmitzer, L.: Subcellular pyrophosphate metabolism in developing tubers of potato (Solanum tuberosum). Plant Molecular Biology 62 (1-2), S. 165 - 179 (2006)

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776.

Zeitschriftenartikel

Fernie, A. R.; Tadmor, Y.; Zamir, D.: Natural genetic variation for improving crop quality. Current Opinion in Plant Biology 9 (2), S. 196 - 202 (2006)

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777.

Zeitschriftenartikel

Hackel, A.; Schauer, N.; Carrari, F.; Fernie, A. R.; Grimm, B.; Kuhn, C.: Sucrose transporter LeSUT1 and LeSUT2 inhibition affects tomato fruit development in different ways. Plant Journal 45 (2), S. 180 - 192 (2006)

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778.

Zeitschriftenartikel

Hajirezaei, M.-R.; Biemelt, S.; Peisker, M.; Lytovchenko, A.; Fernie, A. R.; Sonnewald, U.: The influence of cytosolic phosphorylating glyceraldehyde 3-phosphate dehydrogenase (GAPC) on potato tuber metabolism. Journal of Experimental Botany 57 (10), S. 2363 - 2377 (2006)

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779.

Zeitschriftenartikel

Ishizaki, K.; Schauer, N.; Larson, T. R.; Graham, I. A.; Fernie, A. R.; Leaver, C. J.: The mitochondrial electron transfer flavoprotein complex is essential for survival of Arabidopsis in extended darkness. Plant Journal 47 (5), S. 751 - 760 (2006)

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780.

Zeitschriftenartikel

Joshi, V.; Laubengayer, K. M.; Schauer, N.; Fernie, A. R.; Jander, G.: Two Arabidopsis threonine aldolases are nonredundant and compete with threonine deaminase for a common substrate pool. Plant Cell 18 (12), S. 3564 - 3575 (2006)

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781.

Zeitschriftenartikel

Junker, B. H.; Wuttke, R.; Nunes-Nesi, A.; Steinhauser, D.; Schauer, N.; Buessis, D.; Willmitzer, L.; Fernie, A. R.: Enhancing vacuolar sucrose cleavage within the developing potato tuber has only minor effects on metabolism. Plant and Cell Physiology 47 (2), S. 277 - 289 (2006)

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782.

Zeitschriftenartikel

Kolbe, A.; Oliver, S. N.; Fernie, A. R.; Stitt, M.; van Dongen, J. T.; Geigenberger, P.: Combined transcript and metabolite profiling of Arabidopsis leaves reveals fundamental effects of the thiol-disulfide status on plant metabolism. Plant Physiology 141 (2), S. 412 - 422 (2006)

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783.

Zeitschriftenartikel

Lisec, J.; Schauer, N.; Kopka, J.; Willmitzer, L.; Fernie, A. R.: Gas chromatography mass spectrometry-based metabolite profiling in plants. Nature Protocols 1 (1), S. 387 - 396 (2006)

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784.

Zeitschriftenartikel

Palmieri, L.; Arrigoni, R.; Blanco, E.; Carrari, F.; Zanor, M. I.; Studart-Guimaraes, C.; Fernie, A. R.; Palmieri, F.: Molecular identification of an Arabidopsis S-adenosylmethionine transporter. Analysis of organ distribution, bacterial expression, reconstitution into liposomes, and functional characterization. Plant Physiology 142 (3), S. 855 - 865 (2006)

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785.

Zeitschriftenartikel

Schauer, N.; Fernie, A. R.: Plant metabolomics: towards biological function and mechanism. Trends in Plant Science 11 (10), S. 508 - 516 (2006)

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786.

Zeitschriftenartikel

Schauer, N.; Semel, Y.; Roessner, U.; Gur, A.; Balbo, I.; Carrari, F.; Pleban, T.; Perez-Melis, A.; Bruedigam, C.; Kopka, J. et al.; Willmitzer, L.; Zamir, D.; Fernie, A. R.: Comprehensive metabolic profiling and phenotyping of interspecific introgression lines for tomato improvement. Nature Biotechnology 24 (4), S. 447 - 454 (2006)

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787.

Zeitschriftenartikel

Steinfath, M.; Repsilber, D.; Hische, M.; Schauer, N.; Fernie, A. R.; Selbig, J.: Metabolite profiles as a reflection of physiological status - a methodological validation. Journal of Integrative Bioinformatics 3, S. 2 - 18 (2006)

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788.

Zeitschriftenartikel

Sweetlove, L. J.; Lytovchenko, A.; Morgan, M.; Nunes-Nesi, A.; Taylor, N. L.; Baxter, C. J.; Eickmeier, I.; Fernie, A. R.: Mitochondrial uncoupling protein is required for efficient photosynthesis. Proceedings of the National Academy of Sciences of the United States of America 103 (51), S. 19587 - 19592 (2006)

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789.

Zeitschriftenartikel

Tieman, D.; Taylor, M.; Schauer, N.; Fernie, A. R.; Hanson, A. D.; Klee, H. J.: Tomato aromatic amino acid decarboxylases participate in synthesis of the flavor volatiles 2-phenylethanol and 2-phenylacetaldehyde. Proceedings of the National Academy of Sciences of the United States of America 103 (21), S. 8287 - 8292 (2006)

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790.

Zeitschriftenartikel

Urbanczyk-Wochniak, E.; Usadel, B.; Thimm, O.; Nunes-Nesi, A.; Carrari, F.; Davy, M.; Blaesing, O.; Kowalczyk, M.; Weicht, D.; Polinceusz, A. et al.; Meyer, S.; Stitt, M.; Fernie, A. R.: Conversion of MapMan to allow the analysis of transcript data from Solanaceous species: Effects of genetic and environmental alterations in energy metabolism in the leaf. Plant Molecular Biology 60 (5), S. 773 - 792 (2006)

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791.

Zeitschriftenartikel

Usadel, B.; Nagel, A.; Steinhauser, D.; Gibon, Y.; Blaesing, O. E.; Redestig, H.; Sreenivasulu, N.; Krall, L.; Hannah, M. A.; Poree, F. et al.; Fernie, A. R.; Stitt, M.: PageMan: An interactive ontology tool to generate, display, and annotate overview graphs for profiling experiments. BMC Bioinformatics 7, S. 535 (2006)

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792.

Zeitschriftenartikel

Wagner, S.; Bernhardt, A.; Leuendorf, J. E.; Drewke, C.; Lytovchenko, A.; Mujahed, N.; Gurgui, C.; Frommer, W. B.; Leistner, E.; Fernie, A. R. et al.; Hellmann, H.: Analysis of the Arabidopsis rsr4-1/pdx1-3 mutant reveals the critical function of the PDX1 protein family in metabolism, development, and vitamin B6 biosynthesis. Plant Cell 18 (7), S. 1722 - 1735 (2006)

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793.

Zeitschriftenartikel

Baxter, C. J.; Carrari, F.; Bauke, A.; Overy, S.; Hill, S. A.; Quick, W. P.; Fernie, A. R.; Sweetlove, L. J.: Fruit carbohydrate metabolism in an introgression line of tomato with increased fruit soluble solids. Plant and Cell Physiology 46 (3), S. 425 - 437 (2005)

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794.

Zeitschriftenartikel

Carrari, F.; Coll-Garcia, D.; Schauer, N.; Lytovchenko, A.; Palacios-Rojas, N.; Balbo, I.; Rosso, M.; Fernie, A. R.: Deficiency of a plastidial adenylate kinase in Arabidopsis results in elevated photosynthetic amino acid biosynthesis and enhanced growth. Plant Physiology 137 (1), S. 70 - 82 (2005)

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795.

Zeitschriftenartikel

Davies, H. V.; Shepherd, L. V. T.; Burrell, M. M.; Carrari, F.; Urbanczyk-Wochniak, E.; Leisse, A.; Hancock, R. D.; Taylor, M.; Viola, R.; Ross, H. et al.; McRae, D.; Willmitzer, L.; Fernie, A. R.: Modulation of fructokinase activity of potato (Solanum tuberosum) results in substantial shifts in tuber metabolism. Plant and Cell Physiology 46 (7), S. 1103 - 1115 (2005)

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796.

Zeitschriftenartikel

Fernie, A. R.; Geigenberger, P.; Stitt, M.: Flux an important, but neglected, component of functional glenomics. Current Opinion in Plant Biology 8 (2), S. 174 - 182 (2005)

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797.

Zeitschriftenartikel

Geigenberger, P.; Regierer, B.; Nunes-Nesi, A.; Leisse, A.; Urbanczyk-Wochniak, E.; Springer, F.; van Dongen, J. T.; Kossmann, J.; Fernie, A. R.: Inhibition of de novo pyrimidine synthesis in growing potato tubers leads to a compensatory stimulation of the pyrimidine salvage pathway and a subsequent increase in biosynthetic performance. Plant Cell 17 (7), S. 2077 - 2088 (2005)

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798.

Zeitschriftenartikel

Ishizaki, K.; Larson, T. R.; Schauer, N.; Fernie, A. R.; Graham, I. A.; Leaver, C. J.: The critical role of Arabidopsis electron-transfer flavoprotein: Ubiquinone oxidoreductase during dark-induced starvation. Plant Cell 17 (9), S. 2587 - 2600 (2005)

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799.

Zeitschriftenartikel

Kopka, J.; Schauer, N.; Krueger, S.; Birkemeyer, C.; Usadel, B.; Bergmueller, E.; Doermann, P.; Weckwerth, W.; Gibon, Y.; Stitt, M. et al.; Willmitzer, L.; Fernie, A. R.; Steinhauser, D.: GMD@CSB.DB: the Golm Metabolome Database. Bioinformatics 21 (8), S. 1635 - 1638 (2005)

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800.

Zeitschriftenartikel

Lytovchenko, A.; Hajirezaei, M.-R.; Eickmeier, I.; Mittendorf, V.; Sonnewald, U.; Willmitzer, L.; Fernie, A. R.: Expression of an Escherichia coli phosphoglucomutase in potato (Solanum tuberosum L.) results in minor changes in tuber metabolism and a considerable delay in tuber sprouting. Planta 221 (6), S. 915 - 927 (2005)

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