Publikationen von Alisdair Fernie

Zeitschriftenartikel (56)

1.
Zeitschriftenartikel
Borghi, M.; Fernie, A. R.: Floral Metabolism of Sugars and Amino Acids: Implications for Pollinators’ Preferences and Seed and Fruit Set. Plant Physiology 175 (4), S. 1510 - 1524 (2017)
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Jorge, T. F.; Duro, N.; da Costa, M.; Florian, A.; Ramalho, J. C.; Ribeiro-Barros, A. I.; Fernie, A. R.; António, C.: GC-TOF-MS analysis reveals salt stress-responsive primary metabolites in Casuarina glauca tissues. Metabolomics 13 (8), 95 (2017)
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3.
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Alseekh, S.; Tong, H. (Mathematical Modelling and Systems Biology - Nikoloski, Cooperative Research Groups, Max Planck Institute of Molecular Plant Physiology, Max Planck Society), H.; Scossa, F.; Brotman, Y.; Vigroux, F.; Tohge, T.; Ofner, I.; Zamir, D.; Nikoloski, Z.; Fernie, A. R.: Canalization of Tomato Fruit Metabolism. Plant Cell 29 (11), S. 2753 - 2765 (2017)
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4.
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Arrivault, S.; Obata, T.; Szecówka, M.; Mengin, V.; Guenther, M.; Höhne, M.; Fernie, A. R.; Stitt, M.: Metabolite pools and carbon flow during C4 photosynthesis in maize: 13CO2 labeling kinetics and cell type fractionation. Journal of Experimental Botany 68, S. 283 - 298 (2017)
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5.
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Barros, J. A. S.; Cavalcanti, J. H. F.; Medeiros, D. B.; Nunes-Nesi, A.; Avin-Wittenberg, T.; Fernie, A. R.; Araujo, W. L.: Autophagy Deficiency Compromises Alternative Pathways of Respiration following Energy Deprivation in Arabidopsis thaliana. Plant Physiology 175 (1), S. 62 - 76 (2017)
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6.
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Barros, J. A. S.; Cavalcanti, J. H. F.; Medeiros, D. B.; Nunes-Nesi, A.; Avin-Wittenberg, T.; Fernie, A. R.; Araujo, W. L.: Commonalities and differences in plants deficient in autophagy and alternative pathways of respiration on response to extended darkness. Plant Signaling & Behavior 12 (11), e1377877 (2017)
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7.
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Borghi, M.; Fernie, A. R.; Schiestl, F. P.; Bouwmeester, H. J.: The Sexual Advantage of Looking, Smelling, and Tasting Good: The Metabolic Network that Produces Signals for Pollinators. Trends in Plant Science (2017)
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8.
Zeitschriftenartikel
Daloso, D. M.; Medeiros, D.B.; dos Anjos, L.; Yoshida, T.; Araujo, W. L.; Fernie, A. R.: Metabolism within the specialized guard cells of plants. New Phytologist 216 (4), S. 1018 - 1033 (2017)
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9.
Zeitschriftenartikel
de Souza, L. P.; Naake, T.; Tohge, T.; Fernie, A. R.: From chromatogram to analyte to metabolite. How to pick horses for courses from the massive web resources for mass spectral plant metabolomics. GigaScience 6 (7), S. 1 - 20 (2017)
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10.
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Eisenhut, M.; Bräutigam, A.; Timm, S.; Florian, A.; Tohge, T.; Fernie, A. R.; Bauwe, H.; Weber, A. P.M.: Photorespiration is crucial to the dynamic response of photosynthetic metabolism and stomatal movement to altered \CO2\ availability. Molecular Plant 10 (1), S. 47 - 61 (2017)
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11.
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Esteves-Ferreira, A. A.; Inaba, M.; Obata, T.; Fort, A.; Fleming, G. T. A.; Araujo, W. L.; Fernie, A. R.; Sulpice, R.: A Novel Mechanism, Linked to Cell Density, Largely Controls Cell Division in Synechocystis. Plant Physiology 174 (4), S. 2166 - 2182 (2017)
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12.
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Estrada-Johnson, E.; Csukasi, F.; Pizarro, C. M.; Vallarino, J. G.; Kiryakova, Y.; Vioque, A.; Brumos, J.; Medina-Escobar, N.; Botella, M. A.; Alonso, J. M. et al.; Fernie, A. R.; Sanchez-Sevilla, J. F.; Osorio, S.; Valpuesta, V.: Transcriptomic Analysis in Strawberry Fruits Reveals Active Auxin Biosynthesis and Signaling in the Ripe Receptacle. Frontiers in Plant Science 8, 889 (2017)
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13.
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Estrada-Johnson, E.; Csukasi, F.; Pizarro, C. M.; Vallarino, J. G.; Kiryakova, Y.; Vioque, A.; Merchante, C.; Brumos, J.; Medina-Escobar, N.; Botella, M. A. et al.; Alonso, J. M.; Fernie, A. R.; Sánchez-Sevilla, J. F.; Osorio, S.; Valpuesta, V.: Corrigendum: Transcriptomic Analysis in Strawberry Fruits Reveals Active Auxin Biosynthesis and Signaling in the Ripe Receptacle. Frontiers in Plant Science 8, 1305 (2017)
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14.
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Fernandez Del-Saz, N.; Ribas-Carbo, M.; Martorell, G.; Fernie, A. R.; Florez-Sarasa, I. D.: Measurements of Electron Partitioning Between Cytochrome and Alternative Oxidase Pathways in Plant Tissues. Plant Respiration and Internal Oxygen: Methods and Protocols, S. 203 - 217 (2017)
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15.
Zeitschriftenartikel
Flores-Tornero, M.; Anoman, A. D.; Rosa-Tellez, S.; Toujani, W.; Weber, A. P. M.; Eisenhut, M.; Kurz, S.; Alseekh, S.; Fernie, A. R.; Munoz-Bertomeu, J. et al.; Ros, R.: Overexpression of the triose phosphate translocator (TPT) complements the abnormal metabolism and development of plastidial glycolytic glyceraldehyde-3-phosphate dehydrogenase mutants. The Plant Journal 89 (6), S. 1146 - 1158 (2017)
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16.
Zeitschriftenartikel
Fluegel, F.; Timm, S.; Arrivault, S.; Florian, A.; Stitt, M.; Fernie, A. R.; Bauwe, H.: The Photorespiratory Metabolite 2-Phosphoglycolate Regulates Photosynthesis and Starch Accumulation in Arabidopsis. The Plant Cell 29 (10), S. 2537 - 2551 (2017)
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17.
Zeitschriftenartikel
Gago, J.; Fernie, A. R.; Nikoloski, Z.; Tohge, T.; Martorell, S.; Mariano Escalona, J.; Ribas-Carbo, M.; Flexas, J.; Medrano, H.: Integrative field scale phenotyping for investigating metabolic components of water stress within a vineyard. Plant Methods 13, 90 (2017)
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18.
Zeitschriftenartikel
Geigenberger, P.; Thormählen, I.; Daloso, D. M.; Fernie, A. R.: The Unprecedented Versatility of the Plant‎ Thioredoxin System. Trends in Plant Science 22 (3), S. 249 - 262 (2017)
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19.
Zeitschriftenartikel
Goldy, C.; Svetaz, L. A.; Bustamante, C. A.; Allegrini, M.; Valentini, G. H.; Drincovich, M. F.; Fernie, A. R.; Lara, M. V.: Comparative proteomic and metabolomic studies between Prunus persica genotypes resistant and susceptible to Taphrina deformans suggest a molecular basis of resistance. Plant Physiology and Biochemistry 118, S. 245 - 255 (2017)
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20.
Zeitschriftenartikel
Han, X.; Tohge, T.; Lalor, P.; Dockery, P.; Devaney, N.; Esteves-Ferreira, A. A.; Fernie, A. R.; Sulpice, R.: Phytochrome A and B Regulate Primary Metabolism in Arabidopsis Leaves in Response to Light. Frontiers in Plant Science 8, 1394 (2017)
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21.
Zeitschriftenartikel
Ishiga, Y.; Watanabe, M.; Ishiga, T.; Tohge, T.; Matsuura, T.; Ikeda , Y.; Hoefgen, R.; Fernie, A. R.; Mysore, K.S.: The SAL-PAP Chioroplast Retrograde Pathway Contributes to Plant Immunity by Regulating Glucosinolate Pathway and Phytohormone Signaling. Molecular Plant-Microbe Interactions 30 (10), S. 829 - 841 (2017)
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22.
Zeitschriftenartikel
Ishihara, H.; Moraes, T. A.; Pyl, E. T.; Schulze, W. X.; Obata, T.; Scheffel, A.; Fernie, A. R.; Sulpice, R.; Stitt, M.: Growth rate correlates negatively with protein turnover in Arabidopsis accessions. The Plant Journal 91 (3), S. 416 - 429 (2017)
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23.
Zeitschriftenartikel
Jin, M.; Zhang, X.; Zhao, M.; Deng, M.; Du, Y.; Zhou, Y.; Wang, S.; Tohge, T.; Fernie, A. R.; Willmitzer, L. et al.; Brotman, Y.; Yan, J.; Weiwei, W.: Integrated genomics-based mapping reveals the genetics underlying maize flavonoid biosynthesis. BMC Plant Biology 17 (1), 17 (2017)
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24.
Zeitschriftenartikel
Joshi, V.; Fernie, A. R.: Citrulline metabolism in plants. Amino Acids 49 (9), S. 1543 - 1559 (2017)
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25.
Zeitschriftenartikel
Kudo, M.; Kidokoro, S.; Yoshida, T.; Mizoi, J.; Todaka, D.; Fernie, A. R.; Shinozaki, K.; Yamaguchi-Shinozaki, K.: Double overexpression of DREB and PIF transcription factors improves drought stress tolerance and cell elongation in transgenic plants. Plant Biotechnology Journal 15 (4), S. 458 - 471 (2017)
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26.
Zeitschriftenartikel
Malinova, I.; Alseekh, S.; Feil, R.; Fernie, A. R.; Baumann, O.; Schöttler, M. A.; Lunn, J. E.; Fettke, J.: Starch synthase 4 and plastidal phosphorylase differentially affect starch granule number and morphology. Plant Physiology 174 (1), S. 73 - 85 (2017)
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27.
Zeitschriftenartikel
Matthijs, M.; Fabris, M.; Obata, T.; Foubert, I.; Franco‐Zorrilla, J. M.; Solano, R.; Fernie, A. R.; Vyverman, W.; Goossens, A.: The transcription factor bZIP14 regulates the TCA cycle in the diatom Phaeodactylum tricornutum. EMBO Journal 36 (8), S. 959 - 1116 (2017)
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28.
Zeitschriftenartikel
Medeiros, D.B.; Barros, K. A.; Barros, J. A. S.; Omena-Garcia, R. P.; Arrivault, S.; Sanglard, L. M. V. P.; Detmann, K. C.; Silva, W. B.; Daloso, D. M.; DaMatta, F. M. et al.; Nunes-Nesi, A.; Fernie, A. R.; Araujo, W. L.: Impaired Malate and Fumarate Accumulation Due to the Mutation of the Tonoplast Dicarboxylate Transporter Has Little Effects on Stomatal Behavior. Plant Physiology 175 (3), S. 1068 - 1081 (2017)
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29.
Zeitschriftenartikel
Menezes-Silva, P. E.; Sanglard, L. M. V. P.; Avila, R. T.; Morais, L. E.; Martins, S. C. V.; Nobres, P.; Patreze, C. M.; Ferreira, M. A.; Araujo, W. L.; Fernie, A. R. et al.; DaMatta, F. M.: Photosynthetic and metabolic acclimation to repeated drought events play key roles in drought tolerance in coffee. Journal of Experimental Botany 68 (15), S. 4309 - 4322 (2017)
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30.
Zeitschriftenartikel
Modde, K.; Timm, S.; Florian, A.; Michl, K.; Fernie, A. R.; Bauwe, a. H.: High serine:glyoxylate aminotransferase activity lowers leaf daytime serine levels, inducing the phosphoserine pathway in Arabidopsis. Journal of Experimental Botany 68 (3), S. 643 - 656 (2017)
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31.
Zeitschriftenartikel
Nelson, D. R.; Khraiwesh, B.; Fu, W.; Alseekh, S.; Jaiswal, A.; Chaiboonchoe, A.; Hazzouri, K. M.; O'Connor, M. J.; Butterfoss, G. L.; Drou, N. et al.; Rowe, J. D.; Harb, J.; Fernie, A. R.; Gunsalus, K. C.; Salehi-Ashtiani, K.: The genome and phenome of the green alga Chloroidium sp. UTEX 3007 reveal adaptive traits for desert acclimatization. eLife 6, e25783 (2017)
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32.
Zeitschriftenartikel
Obata, T.; Rosado-Souza, L.; Fernie, A. R.: Coupling Radiotracer Experiments with Chemical Fractionation for the Estimation of Respiratory Fluxes. Plant Respiration and Internal Oxygen: Methods and Protocols, S. 17 - 30 (2017)
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33.
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Omena-Garcia, R. P.; Araujo, W. L.; Gibon, Y.; Fernie, A. R.; Nunes-Nesi, A.: Measurement of Tricarboxylic Acid Cycle Enzyme Activities in Plants. Plant Respiration and Internal Oxygen: Methods and Protocols, S. 167 - 182 (2017)
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34.
Zeitschriftenartikel
Peng, M.; Shahzad, R.; Gul, A.; Subthain, H.; Shen, S.; Lei, L.; Zheng, Z.; Zhou, J.; Lu, D.; Wang, S. et al.; Nishawy, E.; Liu, X.; Tohge, T.; Fernie, A. R.; Luo, J.: Differentially evolved glucosyltransferases determine natural variation of rice flavone accumulation and UV-tolerance. Nature Communications 8, 1975 (2017)
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35.
Zeitschriftenartikel
Poplawski, P.; Tohge, T.; Boguslawska, J.; Rybicka, B.; Tanski, Z.; Trevino, V.; Fernie, A. R.; Piekielko-Witkowska, A.: Integrated transcriptomic and metabolomic analysis shows that disturbances in metabolism of tumor cells contribute to poor survival of RCC patients. Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease 1863 (3), S. 744 - 752 (2017)
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36.
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Robaina-Estévez, S.; Daloso, D. M.; Zhang, Y.; Fernie, A. R.; Nikoloski, Z.: Resolving the central metabolism of Arabidopsis guard cells. Scientific Reports 7, 8307 (2017)
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37.
Zeitschriftenartikel
Romero-Munar, A.; Del-Saz, N. F.; Ribas-Carbó, M.; Flexas, J.; Baraza, E.; Florez-Sarasa, I. D.; Fernie, A. R.; Gulías, J.: Arbuscular mycorrhizal symbiosis with Arundo donax decreases root respiration and increases both photosynthesis and plant biomass accumulation. Plant Cell Environment 40 (7), S. 1115 - 1126 (2017)
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38.
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Ru, L.; Osorio, S.; Wang, L.; Fernie, A. R.; Patrick, J.W.; Ruan, Y.-L.: Transcriptomic and metabolomics responses to elevated cell wall invertase activity during tomato fruit set. Journal of Experimental Botany 68 (15), S. 4263 - 4279 (2017)
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39.
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Schmidt, M. H. -.; Vogel, A.; Denton, A. K.; Istace, B.; Wormit, A.; van de Geest, H.; Bolger, M. E.; Alseekh, S.; Mass, J.; Pfaff, C. et al.; Schurr, U.; Chetelat, R.; Maumus, F.; Aury, J.-M.; Koren, S.; Fernie, A. R.; Zamir, D.; Bolger, A. M.; Usadel, B.: De Novo Assembly of a New Solanum pennellii Accession Using Nanopore Sequencing. The Plant Cell 29 (10), S. 2336 - 2348 (2017)
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40.
Zeitschriftenartikel
Shahnejat-Bushehri, S.; Allu, A. D.; Mehterov, N.; Thirumalaikumar, V. P.; Alseekh, S.; Fernie, A. R.; Mueller-Roeber, B.; Balazadeh, S.: Arabidopsis NAC Transcription Factor JUNGBRUNNEN1 Exerts Conserved Control Over Gibberellin and Brassinosteroid Metabolism and Signaling Genes in Tomato. Frontiers in Plant Science 8, 214 (2017)
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41.
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Smirnova, J.; Fernie, A. R.; Spahn, C. M.T.; Steup, M.: Photometric assay of maltose and maltose-forming enzyme activity by using 4-alpha-glucanotransferase (DPE2) from higher plants. Analytical Biochemistry 532, S. 72 - 82 (2017)
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42.
Zeitschriftenartikel
Stein, O.; Avin-Wittenberg, T.; Krahnert, I.; Zemach, H.; Bogol, V.; Daron, O.; Aloni, R.; Fernie, A. R.; Granot, D.: Arabidopsis fructokinases are important for seed oil accumulation and vascular development. Frontiers in Plant Science 7, 2047 (2017)
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43.
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Stein, O.; Avin-Wittenberg, T.; Krahnert, I.; Zemach, H.; Bogol, V.; Daron, O.; Aloni, R.; Fernie, A. R.; Granot, D.: Corrigendum: Arabidopsis Fructokinases Are Important for Seed Oil Accumulation and Vascular Development. Frontiers in Plant Science 8, 303 (2017)
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44.
Zeitschriftenartikel
Svetaz, L. A.; Bustamante, C. A.; Goldy, C.; Rivero, N.; Müller, G. L.; Valentini, G. H.; Fernie, A. R.; Drincovich, M. F.; Lara, M. V.: Unraveling early events in the Taphrina deformans – Prunus persica interaction: an insight into the differential responses in resistant and susceptible genotypes. Plant, Cell and Environment 40 (8), S. 1456 - 1473 (2017)
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45.
Zeitschriftenartikel
Sweetlove, L. J.; Nielsen, J.; Fernie, A. R.: Engineering central metabolism - a grand challenge for plant biologists. The Plant Journal 90, S. 749 - 763 (2017)
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46.
Zeitschriftenartikel
Tanou, G.; Minas, I. S.; Scossa, F.; Belghazi, M.; Xanthopoulou, A.; Ganopoulos, I.; Madesis, P.; Fernie, A. R.; Molassiotis, A.: Exploring priming responses involved in peach fruit acclimation to cold stress. Scientific Reports 7, 11358 (2017)
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47.
Zeitschriftenartikel
Todaka, D.; Zhao, Y.; Yoshida, T.; Kudo, M.; Kidokoro, S.; Mizoi, J.; Kodaira, K.-S.; Takebayashi, Y.; Kojima, M.; Sakakibara, H. et al.; Toyooka, K.; Sato, M.; Fernie, A. R.; Shinozaki, K.; Yamaguchi-Shinozaki, K.: Temporal and spatial changes in gene expression, metabolite accumulation and phytohormone content in rice seedlings grown under drought stress conditions. The Plant Journal 90 (1), S. 61 - 78 (2017)
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48.
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Tohge, T.; Fernie, A. R.: An Overview of Compounds Derived from the Shikimate and Phenylpropanoid Pathways and Their Medicinal Importance. Mini-Reviews in Medicinal Chemistry 17, S. 1013 - 1027 (2017)
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49.
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Tohge, T.; Fernie, A. R.: Leveraging Natural Variance towards Enhanced Understanding of Phytochemical Sunscreens. Trends in Plant Science 22 (4), S. 308 - 315 (2017)
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50.
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Vallarino, J. G.; Yeats, T. H.; Maximova, E.; Rose, J. K.; Fernie, A. R.; Osorio, S.: Postharvest changes in LIN5-down-regulated plants suggest a role for sugar deficiency in cuticle metabolism during ripening. Phytochemistry 142, S. 11 - 20 (2017)
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