Publikationen von Alisdair Fernie | Max-Planck-Institut für Molekulare Pflanzenphysiologie

Max-Planck-Institut für Molekulare Pflanzenphysiologie

Zeitschriftenartikel (790)

701.

Zeitschriftenartikel

Studart-Guimaraes, C.; Fait, A.; Nunes-Nesi, A.; Carrari, F.; Usadel, B.; Fernie, A. R.: Reduced Expression of Succinyl CoA Ligase can be Compensated for by an Upregulation of the {gamma}-amino-butyrate (GABA) Shunt in Illuminated Tomato Leaves. Plant Physiology 145 (3), S. 626 - 639 (2007)

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702.

Zeitschriftenartikel

Sweetlove, L. J.; Fait, A.; Nunes-Nesi, A.; Williams, T.; Fernie, A. R.: The mitochondrion: An integration point of cellular metabolism and signalling. Critical Reviews in Plant Sciences 26 (1), S. 17 - 43 (2007)

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703.

Zeitschriftenartikel

Szymanski, J.; Bielecka, M.; Carrari, F.; Fernie, A. R.; Hoefgen, R.; Nikiforova, V. J.: On the processing of metabolic information through metabolite-gene communication networks: an approach for modelling causality. Phytochemistry 68 (16-18), S. 2163 - 2175 (2007)

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704.

Zeitschriftenartikel

Carrari, F.; Baxter, C.; Usadel, B.; Urbanczyk-Wochniak, E.; Zanor, M. I.; Nunes-Nesi, A.; Nikiforova, V.; Centero, D.; Ratzka, A.; Pauly, M. et al.; Sweetlove, L. J.; Fernie, A. R.: Integrated analysis of metabolite and transcript levels reveals the metabolic shifts that underlie tomato fruit development and highlight regulatory aspects of metabolic network behavior. Plant Physiology 142 (4), S. 1380 - 1396 (2006)

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705.

Zeitschriftenartikel

Carrari, F.; Fernie, A. R.: Metabolic regulation underlying tomato fruit development. Journal of Experimental Botany 57 (9), S. 1883 - 1897 (2006)

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706.

Zeitschriftenartikel

Fait, A.; Angelovici, R.; Less, H.; Ohad, I.; Urbanczyk-Wochniak, E.; Fernie, A. R.; Galili, G.: Arabidopsis seed development and germination is associated with temporally distinct metabolic switches. Plant Physiology 142 (3), S. 839 - 854 (2006)

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707.

Zeitschriftenartikel

Farre, E. M.; Tech, S.; Trethewey, R. N.; Fernie, A. R.; Willmitzer, L.: Subcellular pyrophosphate metabolism in developing tubers of potato (Solanum tuberosum). Plant Molecular Biology 62 (1-2), S. 165 - 179 (2006)

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708.

Zeitschriftenartikel

Fernie, A. R.; Tadmor, Y.; Zamir, D.: Natural genetic variation for improving crop quality. Current Opinion in Plant Biology 9 (2), S. 196 - 202 (2006)

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709.

Zeitschriftenartikel

Hackel, A.; Schauer, N.; Carrari, F.; Fernie, A. R.; Grimm, B.; Kuhn, C.: Sucrose transporter LeSUT1 and LeSUT2 inhibition affects tomato fruit development in different ways. Plant Journal 45 (2), S. 180 - 192 (2006)

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710.

Zeitschriftenartikel

Hajirezaei, M.-R.; Biemelt, S.; Peisker, M.; Lytovchenko, A.; Fernie, A. R.; Sonnewald, U.: The influence of cytosolic phosphorylating glyceraldehyde 3-phosphate dehydrogenase (GAPC) on potato tuber metabolism. Journal of Experimental Botany 57 (10), S. 2363 - 2377 (2006)

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711.

Zeitschriftenartikel

Ishizaki, K.; Schauer, N.; Larson, T. R.; Graham, I. A.; Fernie, A. R.; Leaver, C. J.: The mitochondrial electron transfer flavoprotein complex is essential for survival of Arabidopsis in extended darkness. Plant Journal 47 (5), S. 751 - 760 (2006)

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712.

Zeitschriftenartikel

Joshi, V.; Laubengayer, K. M.; Schauer, N.; Fernie, A. R.; Jander, G.: Two Arabidopsis threonine aldolases are nonredundant and compete with threonine deaminase for a common substrate pool. Plant Cell 18 (12), S. 3564 - 3575 (2006)

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713.

Zeitschriftenartikel

Junker, B. H.; Wuttke, R.; Nunes-Nesi, A.; Steinhauser, D.; Schauer, N.; Buessis, D.; Willmitzer, L.; Fernie, A. R.: Enhancing vacuolar sucrose cleavage within the developing potato tuber has only minor effects on metabolism. Plant and Cell Physiology 47 (2), S. 277 - 289 (2006)

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714.

Zeitschriftenartikel

Kolbe, A.; Oliver, S. N.; Fernie, A. R.; Stitt, M.; van Dongen, J. T.; Geigenberger, P.: Combined transcript and metabolite profiling of Arabidopsis leaves reveals fundamental effects of the thiol-disulfide status on plant metabolism. Plant Physiology 141 (2), S. 412 - 422 (2006)

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715.

Zeitschriftenartikel

Lisec, J.; Schauer, N.; Kopka, J.; Willmitzer, L.; Fernie, A. R.: Gas chromatography mass spectrometry-based metabolite profiling in plants. Nature Protocols 1 (1), S. 387 - 396 (2006)

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716.

Zeitschriftenartikel

Palmieri, L.; Arrigoni, R.; Blanco, E.; Carrari, F.; Zanor, M. I.; Studart-Guimaraes, C.; Fernie, A. R.; Palmieri, F.: Molecular identification of an Arabidopsis S-adenosylmethionine transporter. Analysis of organ distribution, bacterial expression, reconstitution into liposomes, and functional characterization. Plant Physiology 142 (3), S. 855 - 865 (2006)

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717.

Zeitschriftenartikel

Schauer, N.; Fernie, A. R.: Plant metabolomics: towards biological function and mechanism. Trends in Plant Science 11 (10), S. 508 - 516 (2006)

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718.

Zeitschriftenartikel

Schauer, N.; Semel, Y.; Roessner, U.; Gur, A.; Balbo, I.; Carrari, F.; Pleban, T.; Perez-Melis, A.; Bruedigam, C.; Kopka, J. et al.; Willmitzer, L.; Zamir, D.; Fernie, A. R.: Comprehensive metabolic profiling and phenotyping of interspecific introgression lines for tomato improvement. Nature Biotechnology 24 (4), S. 447 - 454 (2006)

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719.

Zeitschriftenartikel

Steinfath, M.; Repsilber, D.; Hische, M.; Schauer, N.; Fernie, A. R.; Selbig, J.: Metabolite profiles as a reflection of physiological status - a methodological validation. Journal of Integrative Bioinformatics 3, S. 2 - 18 (2006)

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720.

Zeitschriftenartikel

Sweetlove, L. J.; Lytovchenko, A.; Morgan, M.; Nunes-Nesi, A.; Taylor, N. L.; Baxter, C. J.; Eickmeier, I.; Fernie, A. R.: Mitochondrial uncoupling protein is required for efficient photosynthesis. Proceedings of the National Academy of Sciences of the United States of America 103 (51), S. 19587 - 19592 (2006)

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721.

Zeitschriftenartikel

Tieman, D.; Taylor, M.; Schauer, N.; Fernie, A. R.; Hanson, A. D.; Klee, H. J.: Tomato aromatic amino acid decarboxylases participate in synthesis of the flavor volatiles 2-phenylethanol and 2-phenylacetaldehyde. Proceedings of the National Academy of Sciences of the United States of America 103 (21), S. 8287 - 8292 (2006)

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722.

Zeitschriftenartikel

Urbanczyk-Wochniak, E.; Usadel, B.; Thimm, O.; Nunes-Nesi, A.; Carrari, F.; Davy, M.; Blaesing, O.; Kowalczyk, M.; Weicht, D.; Polinceusz, A. et al.; Meyer, S.; Stitt, M.; Fernie, A. R.: Conversion of MapMan to allow the analysis of transcript data from Solanaceous species: Effects of genetic and environmental alterations in energy metabolism in the leaf. Plant Molecular Biology 60 (5), S. 773 - 792 (2006)

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723.

Zeitschriftenartikel

Usadel, B.; Nagel, A.; Steinhauser, D.; Gibon, Y.; Blaesing, O. E.; Redestig, H.; Sreenivasulu, N.; Krall, L.; Hannah, M. A.; Poree, F. et al.; Fernie, A. R.; Stitt, M.: PageMan: An interactive ontology tool to generate, display, and annotate overview graphs for profiling experiments. BMC Bioinformatics 7, S. 535 (2006)

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724.

Zeitschriftenartikel

Wagner, S.; Bernhardt, A.; Leuendorf, J. E.; Drewke, C.; Lytovchenko, A.; Mujahed, N.; Gurgui, C.; Frommer, W. B.; Leistner, E.; Fernie, A. R. et al.; Hellmann, H.: Analysis of the Arabidopsis rsr4-1/pdx1-3 mutant reveals the critical function of the PDX1 protein family in metabolism, development, and vitamin B6 biosynthesis. Plant Cell 18 (7), S. 1722 - 1735 (2006)

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725.

Zeitschriftenartikel

Baxter, C. J.; Carrari, F.; Bauke, A.; Overy, S.; Hill, S. A.; Quick, W. P.; Fernie, A. R.; Sweetlove, L. J.: Fruit carbohydrate metabolism in an introgression line of tomato with increased fruit soluble solids. Plant and Cell Physiology 46 (3), S. 425 - 437 (2005)

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726.

Zeitschriftenartikel

Carrari, F.; Coll-Garcia, D.; Schauer, N.; Lytovchenko, A.; Palacios-Rojas, N.; Balbo, I.; Rosso, M.; Fernie, A. R.: Deficiency of a plastidial adenylate kinase in Arabidopsis results in elevated photosynthetic amino acid biosynthesis and enhanced growth. Plant Physiology 137 (1), S. 70 - 82 (2005)

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727.

Zeitschriftenartikel

Davies, H. V.; Shepherd, L. V. T.; Burrell, M. M.; Carrari, F.; Urbanczyk-Wochniak, E.; Leisse, A.; Hancock, R. D.; Taylor, M.; Viola, R.; Ross, H. et al.; McRae, D.; Willmitzer, L.; Fernie, A. R.: Modulation of fructokinase activity of potato (Solanum tuberosum) results in substantial shifts in tuber metabolism. Plant and Cell Physiology 46 (7), S. 1103 - 1115 (2005)

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728.

Zeitschriftenartikel

Fernie, A. R.; Geigenberger, P.; Stitt, M.: Flux an important, but neglected, component of functional glenomics. Current Opinion in Plant Biology 8 (2), S. 174 - 182 (2005)

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729.

Zeitschriftenartikel

Geigenberger, P.; Regierer, B.; Nunes-Nesi, A.; Leisse, A.; Urbanczyk-Wochniak, E.; Springer, F.; van Dongen, J. T.; Kossmann, J.; Fernie, A. R.: Inhibition of de novo pyrimidine synthesis in growing potato tubers leads to a compensatory stimulation of the pyrimidine salvage pathway and a subsequent increase in biosynthetic performance. Plant Cell 17 (7), S. 2077 - 2088 (2005)

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730.

Zeitschriftenartikel

Ishizaki, K.; Larson, T. R.; Schauer, N.; Fernie, A. R.; Graham, I. A.; Leaver, C. J.: The critical role of Arabidopsis electron-transfer flavoprotein: Ubiquinone oxidoreductase during dark-induced starvation. Plant Cell 17 (9), S. 2587 - 2600 (2005)

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731.

Zeitschriftenartikel

Kopka, J.; Schauer, N.; Krueger, S.; Birkemeyer, C.; Usadel, B.; Bergmueller, E.; Doermann, P.; Weckwerth, W.; Gibon, Y.; Stitt, M. et al.; Willmitzer, L.; Fernie, A. R.; Steinhauser, D.: GMD@CSB.DB: the Golm Metabolome Database. Bioinformatics 21 (8), S. 1635 - 1638 (2005)

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732.

Zeitschriftenartikel

Lytovchenko, A.; Hajirezaei, M.-R.; Eickmeier, I.; Mittendorf, V.; Sonnewald, U.; Willmitzer, L.; Fernie, A. R.: Expression of an Escherichia coli phosphoglucomutase in potato (Solanum tuberosum L.) results in minor changes in tuber metabolism and a considerable delay in tuber sprouting. Planta 221 (6), S. 915 - 927 (2005)

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733.

Zeitschriftenartikel

Lytovchenko, A.; Schauer, N.; Willmitzer, L.; Fernie, A. R.: Tuber-specific cytosolic expression of a bacterial phosphoglucomutase in potato (Solanum tuberosum L.) dramatically alters carbon partitioning. Plant and Cell Physiology 46 (4), S. 588 - 597 (2005)

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734.

Zeitschriftenartikel

Nunes-Nesi, A.; Carrari, F.; Lytovchenko, A.; Smith, A. M. O.; Loureiro, M. E.; Ratcliffe, R. G.; Sweetlove, L. J.; Fernie, A. R.: Enhanced photosynthetic performance and growth as a consequence of decreasing mitochondrial malate dehydrogenase activity in transgenic tomato plants. Plant Physiology 137 (2), S. 611 - 622 (2005)

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735.

Zeitschriftenartikel

Schauer, N.; Fernie, A. R.: Intraspezifische Introgression - wie die Genetik biochemische Phänotype beeinflusst. GenomXpress 1, S. 14 - 16 (2005)

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736.

Zeitschriftenartikel

Schauer, N.; Steinhauser, D.; Strelkov, S.; Schomburg, D.; Allison, G.; Moritz, T.; Lundgren, K.; Roessner-Tunali, U.; Forbes, M. G.; Willmitzer, L. et al.; Fernie, A. R.; Kopka, J.: GC-MS libraries for the rapid identification of metabolites in complex biological samples. FEBS Letters 579 (6), S. 1332 - 1337 (2005)

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737.

Zeitschriftenartikel

Schauer, N.; Zamir, D.; Fernie, A. R.: Metabolic profiling of leaves and fruit of wild species tomato: a survey of the Solanum lycopersicum complex. Journal of Experimental Botany 56 (410), S. 297 - 307 (2005)

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738.

Zeitschriftenartikel

Studart-Guimaraes, C.; Gibon, Y.; Frankel, N.; Wood, C. C.; Zanor, M. I.; Fernie, A. R.; Carrari, F.: Identification and characterisation of the alpha and beta subunits of succinyl CoA ligase of tomato. Plant Molecular Biology 59 (5), S. 781 - 791 (2005)

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739.

Zeitschriftenartikel

Sweetlove, L. J.; Fernie, A. R.: Regulation of metabolic networks: understanding metabolic complexity in the systems biology era. New Phytologist 168 (1), S. 9 - 23 (2005)

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740.

Zeitschriftenartikel

Urbanczyk-Wochniak, E.; Baxter, C.; Kolbe, A.; Kopka, J.; Sweetlove, L. J.; Fernie, A. R.: Profiling of diurnal patterns of metabolite and transcript abundance in potato (Solanum tuberosum) leaves. Planta 221 (6), S. 891 - 903 (2005)

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741.

Zeitschriftenartikel

Urbanczyk-Wochniak, E.; Fernie, A. R.: Metabolic profiling reveals altered nitrogen nutrient regimes have diverse effects on the metabolism of hydroponically-grown tomato (Solanum lycopersicum) plants. Journal of Experimental Botany 56 (410), S. 309 - 321 (2005)

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742.

Zeitschriftenartikel

Bender-Machado, L.; Bauerlein, M.; Carrari, F.; Schauer, N.; Lytovchenko, A.; Gibon, Y.; Kelly, A. A.; Loureiro, M. E.; Muller-Rober, B.; Willmitzer, L. et al.; Fernie, A. R.: Expression of a yeast acetyl CoA hydrolase in the mitochondrion of tobacco plants inhibits growth and restricts photosynthesis. Plant Molecular Biology 55 (5), S. 645 - 662 (2004)

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743.

Zeitschriftenartikel

Carrari, F.; Fernie, A. R.; Iusem, N. D.: Heard it through the grapevine? ABA and sugar cross-talk: the ASR story. Trends in Plant Science 9 (2), S. 57 - 59 (2004)

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744.

Zeitschriftenartikel

Debnam, P. M.; Fernie, A. R.; Leisse, A.; Golding, A.; Bowsher, C. G.; Grimshaw, C.; Knight, J. S.; Emes, M. J.: Altered activity of the P2 isoform of plastidic glucose 6-phosphate dehydrogenase in tobacco (Nicotiana tabacum cv. Samsun) causes changes in carbohydrate metabolism and response to oxidative stress in leaves. Plant Journal 38 (1), S. 49 - 59 (2004)

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745.

Zeitschriftenartikel

Fernie, A. R.; Carrari, F.; Sweetlove, L. J.: Respiratory metabolism: glycolysis, the TCA cycle and mitochondrial electron transport. Current Opinion in Plant Biology 7 (3), S. 254 - 261 (2004)

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746.

Zeitschriftenartikel

Fernie, A. R.; Trethewey, R. N.; Krotzky, A. J.; Willmitzer, L.: Innovation - Metabolite profiling: from diagnostics to systems biology. Nature Reviews Molecular Cell Biology 5 (9), S. 763 - 769 (2004)

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747.

Zeitschriftenartikel

Fridman, E.; Carrari, F.; Liu, Y. S.; Fernie, A. R.; Zamir, D.: Zooming in on a quantitative trait for tomato yield using interspecific introgressions. Science 305 (5691), S. 1786 - 1789 (2004)

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748.

Zeitschriftenartikel

Geigenberger, P.; Regierer, B.; Lytovchenko, A.; Leisse, A.; Schauer, N.; Springer, F.; Kossmann, J.; Fernie, A. R.: Heterologous expression of a ketohexokinase in potato plants leads to inhibited rates of photosynthesis, severe growth retardation and abnormal leaf development. Planta 218 (4), S. 569 - 578 (2004)

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749.

Zeitschriftenartikel

Geigenberger, P.; Stitt, M.; Fernie, A. R.: Metabolic control analysis and regulation of the conversion of sucrose to starch in growing potato tubers. Plant Cell and Environment 27 (6), S. 655 - 673 (2004)

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750.

Zeitschriftenartikel

Junker, B. H.; Wuttke, R.; Tiessen, A.; Geigenberger, P.; Sonnewald, U.; Willmitzer, L.; Fernie, A. R.: Temporally regulated expression of a yeast invertase in potato tubers allows dissection of the complex metabolic phenotype obtained following its constitutive expression. Plant Molecular Biology 56 (1), S. 91 - 110 (2004)

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