Vollständige Publikationsliste

Publikationen von Alisdair Fernie

Zeitschriftenartikel (730)

  1. 701.
    Zeitschriftenartikel
    Leggewie, G.; Kolbe, A.; Lemoine, R.; Roessner, U.; Lytovchenko, A.; Zuther, E.; Kehr, J.; Frommer, W. B.; Riesmeier, J. W.; Willmitzer, L. et al.; Fernie, A. R.: Overexpression of the sucrose transporter SoSUT1 in potato results in alterations in leaf carbon partitioning and in tuber metabolism but has little impact on tuber morphology. Planta 217 (1), S. 158 - 167 (2003)
  2. 702.
    Zeitschriftenartikel
    Lytovchenko, A.; Fernie, A. R.: Photosynthetic metabolism is severely impaired on the parallel reduction of plastidial and cytosolic isoforms of phosphoglucomutase. Plant Physiology and Biochemistry 41 (3), S. 193 - 200 (2003)
  3. 703.
    Zeitschriftenartikel
    Roessner-Tunali, U.; Urbanczyk-Wochniak, E.; Czechowski, T.; Kolbe, A.; Willmitzer, L.; Fernie, A. R.: De novo amino acid biosynthesis in potato tubers is regulated by sucrose levels. Plant Physiology 133 (2), S. 683 - 692 (2003)
  4. 704.
    Zeitschriftenartikel
    Roessner-Tunali, U.; Hegemann, B.; Lytovchenko, A.; Carrari, F.; Bruedigam, C.; Granot, D.; Fernie, A. R.: Metabolic profiling of transgenic tomato plants overexpressing hexokinase reveals that the influence of hexose phosphorylation diminishes during fruit development. Plant Physiology 133 (1), S. 84 - 99 (2003)
  5. 705.
    Zeitschriftenartikel
    Stitt, M.; Fernie, A. R.: From measurements of metabolites to metabolomics: an 'on the fly' perspective illustrated by recent studies of carbon-nitrogen interactions. Current Opinion in Biotechnology 14 (2), S. 136 - 144 (2003)
  6. 706.
    Zeitschriftenartikel
    Sweetlove, L. J.; Last, R. L.; Fernie, A. R.: Predictive metabolic engineering: A goal for systems biology. Plant Physiology 132 (2), S. 420 - 425 (2003)
  7. 707.
    Zeitschriftenartikel
    Urbanczyk-Wochniak, E.; Luedemann, A.; Kopka, J.; Selbig, J.; Roessner-Tunali, U.; Willmitzer, L.; Fernie, A. R.: Parallel analysis of transcript and metabolic profiles: a new approach in systems biology. EMBO Reports 4 (10), S. 989 - 993 (2003)
  8. 708.
    Zeitschriftenartikel
    Urbanczyk-Wochniak, E.; Leisse, A.; Roessner-Tunali, U.; Lytovchenko, A.; Reismeier, J.; Willmitzer, L.; Fernie, A. R.: Expression of a bacterial xylose isomerase in potato tubers results in an altered hexose composition and a consequent induction of metabolism. Plant and Cell Physiology 44 (12), S. 1359 - 1367 (2003)
  9. 709.
    Zeitschriftenartikel
    Fernie, A. R.; Roscher, A.; Ratcliffe, R. G.; Kruger, N. J.: Activation of pyrophosphate: fructose-6-phosphate 1-phosphotransferase by fructose 2,6-bisphosphate stimulates conversion of hexose phosphates to triose phosphates but does not influence accumulation of carbohydrates in phosphate-deficient tobacco cells. Physiologia Plantarum 114 (2), S. 172 - 181 (2002)
  10. 710.
    Zeitschriftenartikel
    Fernie, A. R.; Willmitzer, L.; Trethewey, R. N.: Sucrose to starch: a transition in molecular plant physiology. Trends in Plant Science 7 (1), S. 35 - 41 (2002)
  11. 711.
    Zeitschriftenartikel
    Fernie, A. R.; Tiessen, A.; Stitt, M.; Willmitzer, L.; Geigenberger, P.: Altered metabolic fluxes result from shifts in metabolite levels in sucrose phosphorylase-expressing potato tubers. Plant Cell and Environment 25 (10), S. 1219 - 1232 (2002)
  12. 712.
    Zeitschriftenartikel
    Fernie, A. R.; Tauberger, E.; Lytovchenko, A.; Roessner, U.; Willmitzer, L.; Trethewey, R. N.: Antisense repression of cytosolic phosphoglucomutase in potato (Solanum tuberosum) results in severe growth retardation, reduction in tuber number and altered carbon metabolism. Planta 214 (4), S. 510 - 520 (2002)
  13. 713.
    Zeitschriftenartikel
    Fernie, A. R.; Swiedrych, A.; Tauberger, E.; Lytovchenko, A.; Trethewey, R. N.; Willmitzer, L.: Potato plants exhibiting combined antisense repression of cytosolic and plastidial isoforms of phosphoglucomutase surprisingly approximate wild type with respect to the rate of starch synthesis. Plant Physiology and Biochemistry 40 (11), S. 921 - 927 (2002)
  14. 714.
    Zeitschriftenartikel
    Lytovchenko, A.; Sweetlove, L.; Pauly, M.; Fernie, A. R.: The influence of cytosolic phosphoglucomutase on photosynthetic carbohydrate metabolism. Planta 215 (6), S. 1013 - 1021 (2002)
  15. 715.
    Zeitschriftenartikel
    Lytovchenko, A.; Bieberich, K.; Willmitzer, L.; Fernie, A. R.: Carbon assimilation and metabolism in potato leaves deficient in plastidial phosphoglucomutase. Planta 215 (5), S. 802 - 811 (2002)
  16. 716.
    Zeitschriftenartikel
    Regierer, B.; Fernie, A. R.; Springer, F.; Perez-Melis, A.; Leisse, A.; Koehl, K. I.; Willmitzer, L.; Geigenberger, P.; Kossmann, J.: Starch content and yield increase as a result of altering adenylate pools in transgenic plants. Nature Biotechnology 20 (12), S. 1256 - 1260 (2002)
  17. 717.
    Zeitschriftenartikel
    Roessner, U.; Willmitzer, L.; Fernie, A. R.: Metabolic profiling and biochemical phenotyping of plant systems. Plant Cell Reports 21 (3), S. 189 - 196 (2002)
  18. 718.
    Zeitschriftenartikel
    Veramendi, J.; Fernie, A. R.; Leisse, A.; Willmitzer, L.; Trethewey, R. N.: Potato hexokinase 2 complements transgenic Arabidopsis plants deficient in hexokinase 1 but does not play a key role in tuber carbohydrate metabolism. Plant Molecular Biology 49 (5), S. 491 - 501 (2002)
  19. 719.
    Zeitschriftenartikel
    Fernie, A. R.; Willmitzer, L.: Molecular and biochemical triggers of potato tuber development. Plant Physiology 127 (4), S. 1459 - 1465 (2001)
  20. 720.
    Zeitschriftenartikel
    Fernie, A. R.; Willmitzer, L.: Update on tuber formation, dormancy and sprouting. Molecular and biochemical triggers of potato tuber development. Plant Physiology 127 (4), S. 1459 - 1465 (2001)
  21. 721.
    Zeitschriftenartikel
    Fernie, A. R.; Roessner, U.; Trethewey, R. N.; Willmitzer, L.: The contribution of plastidial phosphoglucomutase to the control of starch synthesis within the potato tuber. Planta 213 (3), S. 418 - 426 (2001)
  22. 722.
    Zeitschriftenartikel
    Fernie, A. R.; Roessner, U.; Leisse, A.; Lubeck, J.; Trethewey, R. N.; Willmitzer, L.: Simultaneous antagonistic modulation of enzyme activities in transgenic plants through the expression of a chimeric transcript. Plant Physiology and Biochemistry 39 (10), S. 825 - 830 (2001)
  23. 723.
    Zeitschriftenartikel
    Fernie, A. R.; Roessner, U.; Geigenberger, P.: The sucrose analog palatinose leads to a stimulation of sucrose degradation and starch synthesis when supplied to discs of growing potato tubers. Plant Physiology 125 (4), S. 1967 - 1977 (2001)
  24. 724.
    Zeitschriftenartikel
    Fernie, A. R.; Roscher, A.; Ratcliffe, R. G.; Kruger, N. J.: Fructose 2,6-bisphosphate activates pyrophosphate: fructose-6-phosphate 1-phosphotransferase and increases triose phosphate to hexose phosphate cycling in heterotrophic cells. Planta 212 (2), S. 250 - 263 (2001)
  25. 725.
    Zeitschriftenartikel
    Roessner, U.; Luedemann, A.; Brust, D.; Fiehn, O.; Linke, T.; Willmitzer, L.; Fernie, A. R.: Metabolic profiling allows comprehensive phenotyping of genetically or environmentally modified plant systems. Plant Cell 13 (1), S. 11 - 29 (2001)
  26. 726.
    Zeitschriftenartikel
    Roessner, U.; Willmitzer, L.; Fernie, A. R.: High-resolution metabolic phenotyping of genetically and environmentally diverse potato tuber systems. Identification of phenocopies. Plant Physiology 127 (3), S. 749 - 764 (2001)
  27. 727.
    Zeitschriftenartikel
    Trethewey, R. N.; Fernie, A. R.; Bachmann, A.; Fleischer-Notter, H.; Geigenberger, P.; Willmitzer, L.: Expression of a bacterial sucrose phosphorylase in potato tubers results in a glucose-independent induction of glycolysis. Plant, Cell & Environment 24 (3), S. 357 - 365 (2001)
  28. 728.
    Zeitschriftenartikel
    Geigenberger, P.; Fernie, A. R.; Gibon, Y.; Christ, M.; Stitt, M.: Metabolic activity decreases as an adaptive response to low internal oxygen in growing potato tubers. Journal of Biological Chemistry 381 (8), S. 723 - 740 (2000)
  29. 729.
    Zeitschriftenartikel
    Tauberger, E.; Fernie, A. R.; Emmermann, M.; Renz, A.; Kossmann, J.; Willmitzer, L.; Trethewey, R. N.: Antisense inhibition of plastidial phosphoglucomutase provides compelling evidence that potato tuber amyloplasts import carbon from the cytosol in the form of glucose-6-phosphate. Plant Journal 23 (1), S. 43 - 53 (2000)
  30. 730.
    Zeitschriftenartikel
    Hempstead, P. D.; Yewdall, S. J.; Fernie, A. R.; Lawson, D. M.; Artymiuk, P. J.; Rice, D. W.; Ford, G. C.; Harrison, P. M.: Comparison of the three-dimensional structures of recombinant human H and horse L ferritins at high resolution. Journal of Molecular Biology 268 (2), S. 424 - 448 (1997)

Buch (2)

  1. 731.
    Buch
    Fernie, A. R.; Bauwe, H.; Weber, A. P.M. (Hg.): Photorespiration: Methods and Protocols. Humanapress, New York (2017), 274 S.
  2. 732.
    Buch
    Baginsky, S.; Fernie, A. R.: Plant Systems Biology. Birkhäuser Verlag, Basel, SUI (2007)

Buchkapitel (24)

  1. 733.
    Buchkapitel
    Llorente, C.; Jimenez, R.; Brotman, Y.; Fernie, A. R.; Sreenivasulu, N.; Jackie: Rice Grain Quality Benchmarking Through Profiling of Volatiles and Metabolites in Grains Using Gas Chromatography Mass Spectrometry. In: Rice Grain Quality: Methods and Protocols, Bd. 1892, S. 187 - 199 (Hg. Sreenivasulu, N.). Springer New York, New York, NY (2019)
  2. 734.
    Buchkapitel
    Alseekh, S.; Wu, S.; Brotman, Y.; Fernie, A. R.: Guidelines for Sample Normalization to Minimize Batch Variation for Large-Scale Metabolic Profiling of Plant Natural Genetic Variance. In: Methods in Molecular Biology, Bd. 1778, S. 33 - 46 (Hg. António, C.). Humana Press, Clifton, N.J. (2018)
  3. 735.
    Buchkapitel
    de Souza, L. P.; Fernie, A. R.; Tohge, T.: Carbon Atomic Survey for Identification of Selected Metabolic Fluxes. In: Methods in Molecular Biology, Bd. 1778, S. 59 - 70 (Hg. António, C.). Humana Press, Clifton, N.J. (2018)
  4. 736.
    Buchkapitel
    Vallarino, J. G.; Erban, A.; Fehrle, I.; Fernie, A. R.; Kopka, J.; Osorio, S.: Acquisition of Volatile Compounds by Gas Chromatography–Mass Spectrometry (GC-MS). In: Methods in Molecular Biology, Bd. 1778, S. 225 - 240 (Hg. António, C.). Humana Press, Clifton, N.J. (2018)
  5. 737.
    Buchkapitel
    Watanabe, M.; Tohge, T.; Balazadeh, S.; Erban, A.; Giavalisco, P.; Kopka, J.; Mueller-Roeber, B.; Fernie, A. R.; Hoefgen, R.: Comprehensive Metabolomics Studies of Plant Developmental Senescence. In: Plant Senescence: Methods and Protocols, S. 339 - 358 (Hg. Guo, Y.). Springer New York, New York, NY (2018)
  6. 738.
    Buchkapitel
    de Souza, L. P.; Szecowka, M.; Fernie, A. R.; Tohge, T.: 13CO2 labeling and mass spectral analysis of photorespiration. In: Methods in Molecular Biology, Bd. 1653, S. 157 - 166. Humana Press, Clifton, N.J. (2017)
  7. 739.
    Buchkapitel
    Del-Saz, N.F.; Ribas-Carbo, M.; Martorell, G.; Fernie, A. R.; Florez-Sarasa, I. D.: Measurements of electron partitioning between cytochrome and alternative oxidase pathways in plant tissues. In: Methods in Molecular Biology, Bd. 1670, S. 203 - 217. Humana Press, Clifton, N.J. (2017)
  8. 740.
    Buchkapitel
    Fernie, A. R.; Bauwe, H.; Sweetlove, L.J.: Investigating the role of the photorespiratory pathway in non-photosynthetic tissues. In: Methods in Molecular Biology, Bd. 1653, S. 217 - 225. Humana Press, Clifton, N.J. (2017)
  9. 741.
    Buchkapitel
    Fernie, A. R.; Tohge, T.: The Genetics of Plant Metabolism. In: Annual Review of Genetics, Bd. 51, S. 287 - 310. Annual Reviews, Palo Alto (2017)
  10. 742.
    Buchkapitel
    Obata, T.; Rosado-Souza, L.; Fernie, A. R.: Coupling radiotracer experiments with chemical fractionation for the estimation of respiratory fluxes. In: Methods in Molecular Biology, Bd. 1670, S. 17 - 30. Humana Press, Clifton, N.J. (2017)
  11. 743.
    Buchkapitel
    Omena-Garcia, R.P.; Araújo, W.L.; Gibon, Y.; Fernie, A. R.; Nunes-Nesi, A.: Measurement of tricarboxylic acid cycle enzyme activities in plants. In: Methods in Molecular Biology, Bd. 1670, S. 167 - 182. Springer, New York, NY (2017)
  12. 744.
    Buchkapitel
    Osorio, S.; Fernie, A. R.: Plant Systems Biology. In: Systems Biology (Hg. Meyers, R. A.). Wiley-Blackwell (2012)
  13. 745.
    Buchkapitel
    Osorio, S.; Do, P. T.; Fernie, A. R.: Profiling Primary Metabolites of Tomato Fruit with Gas Chromatography/Mass Spectrometry. In: Plant Metabolomics: Methods and Protocols, 2012/02/29 Aufl., S. 101 - 110 (Hg. Hardy, N. W.; Hall, R. D.). Humana Press Inc., Totowa, NJ, USA (2012)
  14. 746.
    Buchkapitel
    Fernie, A. R.; Keurentjes, J. J. B.: Genetics, genomics and metabolomics. In: The biology of plant metabolomics, 2011/05/03 Aufl., S. 219 - 260 (Hg. Hall, R. D.). Blackwell-Wiley, London, UK (2011)
  15. 747.
    Buchkapitel
    Fait, A.; Sienkiewicz-Porzucek, A.; Fernie, A. R.: Metabolomics approaches to advance understanding of nitrogen assimilation and carbon nitrogen interactions. In: Nitrogen Metabolism in Plants in the Post-Genomic Era, S. 249 - 268 (Hg. Foyer, C. H.; Zhang, H.). Wiley-Blackwell, Oxford, UK (2010)
  16. 748.
    Buchkapitel
    Erban, A.; Schauer, N.; Fernie, A. R.; Kopka, J.: Nonsupervised construction and application of mass spectral and retention time index libraries from time-of-flight gas chromatography-mass spectrometry metabolite profiles. In: Metabolomics: Methods and Protocols, S. 19 - 38 (Hg. Weckwerth, W.). Humana Press Inc., Totowa, NJ, USA (2007)
  17. 749.
    Buchkapitel
    Urbanczyk-Wochniak, E.; Willmitzer, L.; Fernie, A. R.: Integrating profiling data: using linear correlation to reveal coregulation of transcript and metabolites. In: Metabolomics: Methods and Protocols, S. 77 - 85 (Hg. Weckwerth, W.). Humana Press Inc., Totowa, NJ, USA (2007)
  18. 750.
    Buchkapitel
    Carrari, F.; Schauer, N.; Willmitzer, L.; Fernie, A. R.: Systems biology: A renaissance of the Top-down approach for plant analysis. In: Plant Metabolomics, S. 185 - 198 (Hg. Nagata, T.; Lörz, H.; Widholm, J. M.). Springer-Verlag, Heidelberg, GER (2006)
 
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