Publikationen von Alisdair Fernie

Max-Planck-Institut für Molekulare Pflanzenphysiologie

Zeitschriftenartikel (1117)

51.

Zeitschriftenartikel

Nascimento, C.P.; da Fonseca-Pereira, P.; Ferreira-Silva, M.; Rosado-Souza, L.; Linka, N.; Fernie, A. R.; Araújo, W.L.; Nunes-Nesi, A.: Functional analysis of the extraplastidial TRX system in germination and early stages of development of Arabidopsis thaliana. Plant Science 350, 112310 (2025)

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52.

Zeitschriftenartikel

Tiozon, R. J. N.; Pasion-Uy, E.; Alseekh, S.; Sartagoda, K. J. D.; Gempesaw, S.; Tolentino, J. H. G.; Fernie, A. R.; Sreenivasulu, N.: Lipidomics-based association study reveals genomic signatures of anti-cancer qualities of pigmented rice sprouts. Frontiers in Plant Science 16, 1533442 (2025)

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53.

Zeitschriftenartikel

Wu, S.; Zhang, S.; Liu, C.-M.; Fernie, A. R.; Yan, S.: Recent Advances in Mass Spectrometry-based Protein Interactome Studies. Molecular & Cellular Proteomics 24 (1), 100887 (2025)

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54.

Zeitschriftenartikel

Yu, Y.; Li, W.; Liu, Y.; Liu, Y.; Zhang, Q.; Ouyang, Y.; Ding, W.; Xue, Y.; Zou, Y.; Yan, J. et al.; Jia, A.; Yan, J.; Hao, X.; Gou, Y.; Zhai, Z.; Liu, L.; Zheng, Y.; Zhang, B.; Xu, J.; Yang, N.; Xiao, Y.; Zhuo, L.; Lai, Z.; Yin, P.; Liu, H.-J.; Fernie, A. R.; Jackson, D.; Yan, J.: A Zea genus-specific micropeptide controls kernel dehydration in maize. Cell 188, S. 44 - 59 (2025)

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55.

Zeitschriftenartikel

D'Auria, J.C.; Fernie, A. R.: The BAHD and the bold: the mitochondria's role in alkaloid artistry. Trends in Plant Science 29 (12), S. 1290 - 1291 (2024)

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56.

Zeitschriftenartikel

Domer, A.; Jasinska, W.; Rosental, L.; Shochat, E.; Alseekh, S.; Fernie, A. R.; Brotman, Y.; Ovadia, O.: Comparative analysis of the plasma metabolome of migrating passerines: novel insights into stopover metabolism. Journal of Avian Biology 2025 (2), e03331 (2024)

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57.

Zeitschriftenartikel

Fontanet-Manzaneque, J. B.; Laibach, N.; Herrero-García, I.; Coleto-Alcudia, V.; Blasco-Escámez, D.; Zhang, C.; Orduña, L.; Alseekh, S.; Miller, S.; Bjarnholt, N. et al.; Fernie, A. R.; Matus, J. T.; Caño-Delgado, A. I.: Untargeted mutagenesis of brassinosteroid receptor SbBRI1 confers drought tolerance by altering phenylpropanoid metabolism in Sorghum bicolor. Plant Biotechnology Journal 22 (12), S. 3406 - 3423 (2024)

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58.

Zeitschriftenartikel

He, J.; Hao, Y.; He, Y.; Li, W.; Shi, Y.; Khurshid, M.; Lai, D.; Ma, C.; Wang, X.; Li, J. et al.; Cheng, J.; Fernie, A. R.; Ruan, J.; Zhang, K.; Zhou, M.: Genome-wide associated study identifies FtPMEI13 gene conferring drought resistance in Tartary buckwheat. The Plant Journal 120 (6), S. 2398 - 2419 (2024)

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59.

Zeitschriftenartikel

Kanojia, A.; Lyall, R.; Sujeeth, N.; Alseekh, S.; Martinez Rivas, F.J.; Fernie, A. R.; Gechev, T.S.; Petrov, V.: Physiological and molecular insights into the effect of a seaweed biostimulant on enhancing fruit yield and drought tolerance in tomato. Plant Stress 14, 100692 (2024)

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60.

Zeitschriftenartikel

Luo, J.; He, C.; Yan, S.; Jiang, C.; Chen, A.; Li, K.; Zhu, Y.; Gui, S.; Yang, N.; Xiao, Y. et al.; Wu, S.; Zhang, F.; Liu, T.; Wang, J.; Huang, W.; Yang, Y.; Wang, H.; Yang, W.; Li, W.; Zhuo, L.; Fernie, A. R.; Zhan, J.; Wang, L.; Yan, J.: A metabolic roadmap of waxy corn flavor. Molecular Plant 17 (12), S. 1883 - 1898 (2024)

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61.

Zeitschriftenartikel

Mazzarella, T.; Chialva, M.; de Souza, L. P.; Wang, J.Y.; Votta, C.; Tiozon, R.; Vaccino, P.; Salvioli di Fossalunga, A.; Sreenivasulu, N.; Asami, T. et al.; Fernie, A. R.; Al-Babili, S.; Lanfranco, L.; Fiorilli, V.: Effect of exogenous treatment with zaxinone and its mimics on rice root microbiota across different growth stages. Scientific Reports 14, 31374 (2024)

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62.

Zeitschriftenartikel

Tiozon, R. J. N.; Alseekh, S.; Fernie, A. R.; Bonto, A. P.; Yu, J.; Buenafe, R. J. Q.; Sreenivasulu, N.: Comprehensive lipidomic insights of differentially accumulating lipids in large pigmented rice sprout collection and the changes in the starch composition upon germination. Food Chemistry 460 (Part 2), 140677 (2024)

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63.

Zeitschriftenartikel

Wijesingha Ahchige, M.; Fisher, J.; Sokolowska, E.; Lyall, R.; Illing, N.; Skirycz, A.; Zamir, D.; Alseekh, S.; Fernie, A. R.: The variegated canalized-1 tomato mutant is linked to photosystem assembly. Computational and Structural Biotechnology Journal 23, S. 3967 - 3988 (2024)

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64.

Zeitschriftenartikel

Farag, M.; Baky, M.; Kuehnhold, H.; Kriege, E.; Kunzmann, A.; Alseekh, S.; Al-Hammady, M.; Ezz, S.; Fernie, A. R.; Westphal, H. et al.; Stuhr, M.: Effects of thermal and UV stress on the polar and non-polar metabolome of photosymbiotic jellyfish and sea anemones. Marine Pollution Bulletin 208, 116983 (2024)

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65.

Zeitschriftenartikel

Huang, X.; He, Y.; Zhang, K.; Shi, Y.; Zhao, H.; Lai, D.; Lin, H.; Wang, X.; Yang, Z.; Xiao, Y. et al.; Li, W.; Ouyang, Y.; Woo, S.H.; Quinet, M.; Georgiev, M.I.; Fernie, A. R.; Liu, X.; Zhou, M.: Evolution and Domestication of a Novel Biosynthetic Gene Cluster Contributing to the Flavonoid Metabolism and High-Altitude Adaptability of Plants in the Fagopyrum Genus. Advanced Science 11 (43), 2403603 (2024)

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66.

Zeitschriftenartikel

Liu, F.; Fernie, A. R.; Zhang, Y.: Can a nitrogen-fixing organelle be engineered within plants? Trends in Plant Science 29 (11), S. 1168 - 1171 (2024)

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67.

Zeitschriftenartikel

Che, Y.; Ding, Z.; Shen, C.; Fernie, A. R.; Tang, X.; Yao, Y.; Liu, J.; Wang, Y.; Li, R.; Guo, J.: Physiological and Microstructure Analysis Reveals the Mechanism by Which Formic Acid Delays Postharvest Physiological Deterioration of Cassava. Antioxidants: open access journal 13 (10), 1245 (2024)

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68.

Zeitschriftenartikel

El-Shiekh, R. A.; Elshimy, R.; Mandour, A. A.; Kassem, H. A. H.; Khaleel, A. E.; Alseekh, S.; Fernie, A. R.; Salem, M. A.: Phytochemical characterisation of leaves and stems of Murraya koenigii (L.) Sprengel and Murraya paniculata (L.) Jack and their antibacterial activity against multidrug-resistant Acinetobacter baumannii bacterial infection. International journal of food science & technology 59 (10), S. 7998 - 8010 (2024)

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69.

Zeitschriftenartikel

Naake, T.; D'Auria, J.; Fernie, A. R.; Scossa, F.: Phylogenomic and synteny analysis of BAHD and SCP/SCPL gene families reveal their evolutionary histories in plant specialized metabolism. Philosophical Transactions of the Royal Society of London, Series B: Biological Sciences 379 (1914), 20230349 (2024)

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70.

Zeitschriftenartikel

Rüscher, D.; Vasina, V. V.; Knoblauch, J.; Bellin, L.; Pommerrenig, B.; Alseekh, S.; Fernie, A. R.; Neuhaus, H. E.; Knoblauch, M.; Sonnewald, U. et al.; Zierer, W.: Symplasmic phloem loading and subcellular transport in storage roots are key factors for carbon allocation in cassava. Plant Physiology 196 (2), S. 1322 - 1339 (2024)

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71.

Zeitschriftenartikel

Tóth, D.; Tengölics, R.; Aarabi, F.; Karlsson, A.; Vidal-Meireles, A.; Kovács, L.; Kuntam, S.; Körmöczi, T.; Fernie, A. R.; Hudson, E. P. et al.; Papp, B.; Tóth, S. Z.: Chloroplastic ascorbate modifies plant metabolism and may act as a metabolite signal regardless of oxidative stress. Plant Physiology 196 (2), S. 1691 - 1711 (2024)

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72.

Zeitschriftenartikel

Dorrell, R. G.; Zhang, Y.; Liang, Y.; Gueguen, N.; Nonoyama, T.; Croteau, D.; Penot, M.; Adiba, S.; Bailleul, B.; Gros, V. et al.; Karlusich, P.; José, J.; Zweig, N.; Fernie, A. R.; Jouhet, J.; Maréchal, E.; Bowler, C.: Complementary environmental analysis and functional characterization of lower glycolysis-gluconeogenesis in the diatom plastid. The Plant Cell 36 (9), S. 3584 - 3610 (2024)

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73.

Zeitschriftenartikel

Fu, C.-C.; Huang, B.-X.; Wang, S.-S.; Song, Y.-C.; Metok, D.; Tan, Y.-X.; Fan, T.-P.; Fernie, A. R.; Zargar, M.; Wang, Y. et al.; Chen, M.-X.; Yu, L.-W.; Zhu, F.-Y.: Deciphering the roles of bacterial and fungal communities in the formation and quality of agarwood. Stress Biology 4, 40 (2024)

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74.

Zeitschriftenartikel

von Steimker, J.; Tripodi, P.; Wendenburg, R.; Tringovska, I.; Nankar, A. N.; Stoeva, V.; Pasev, G.; Klemmer, A.; Todorova, V.; Bulut, M. et al.; Tikunov, Y.; Bovy, A.; Gechev, T.; Kostova, D.; Fernie, A. R.; Alseekh, S.: The genetic architecture of the pepper metabolome and the biosynthesis of its signature capsianoside metabolites. Current Biology 34 (18), S. 4209 - 4223 (2024)

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75.

Zeitschriftenartikel

Badoni, S.; Pasion-Uy, E. A.; Kor, S.; Kim, S.-R.; Tiozon, R. J. N.; Misra, G.; Buenafe, R. J. Q.; Labarga, L. M.; Ramos-Castrosanto, A. R.; Pratap, V. et al.; Slamet-Loedin, I.; von Steimker, J.; Alseekh, S.; Fernie, A. R.; Kohli, A.; Khush, G. S.; Sreenivasulu, N.: Multiomics of a rice population identifies genes and genomic regions that bestow low glycemic index and high protein content. Proceedings of the National Academy of Sciences of the United States of America 121 (36), e2410598121 (2024)

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76.

Zeitschriftenartikel

Gutschker, S.; Ruescher, D.; Rabbi, I.Y.; Rosado-Souza, L.; Pommerrenig, B.; Pauly, M.; Robertz, S.; van Doorn, A.M.; Schlereth, A.; Neuhaus, H.E. et al.; Fernie, A. R.; Reinert, S.; Sonnewald, U.; Zierer, W.: Carbon usage in yellow-fleshed Manihot esculenta storage roots shifts from starch biosynthesis to cell wall and raffinose biosynthesis via the myo-inositol pathway. The Plant Journal 119 (4), S. 2045 - 2062 (2024)

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77.

Zeitschriftenartikel

Hayashi, K.; Fernie, A. R.: A neat wheat trick to hide genes from selection. Trends in Plant Science 29 (8), S. 837 - 838 (2024)

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78.

Zeitschriftenartikel

Liu, Y.; Li, H.; Liu, J.; Wang, Y.; Jiang, C.; Zhou, Z.; Zhuo, L.; Li, W.; Fernie, A. R.; Jackson, D. et al.; Yan, J.; Luo, Y.: The additive function of YIGE2 and YIGE1 in regulating maize ear length. The Plant Journal 119 (3), S. 1327 - 1335 (2024)

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79.

Zeitschriftenartikel

Singh, P.; Kumari, A.; Khaladhar, V.C.; Singh, N.; Pathak, P.K.; Kumar, V.; Kumar, R.J.; Jain, P.; Thakur, J.K.; Fernie, A. R. et al.; Bauwe, H.; Raghavendra, A.S.; Gupta, K.J.: Serine hydroxymethyltransferase6 is involved in growth and resistance against pathogens via ethylene and lignin production in Arabidopsis. The Plant Journal 119 (4), S. 1920 - 1936 (2024)

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80.

Zeitschriftenartikel

Tariq, A.; Meng, M.; Jiang, X.; Bolger, A.; Beier, S.; Buchmann, J.P.; Fernie, A. R.; Wen, W.; Usadel, B.: In-depth exploration of the genomic diversity in tea varieties based on a newly constructed pangenome of Camellia sinensis. The Plant Journal 119 (4), S. 2096 - 2115 (2024)

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81.

Zeitschriftenartikel

Yang, C.; Shen, S.; Zhan, C.; Li, Y.; Zhang, R.; Lv, Y.; Yang, Z.; Zhou, J.; Shi, Y.; Liu, X. et al.; Shi, J.; Zhang, D.; Fernie, A. R.; Luo, J.: Variation in a Poaceae-conserved fatty acid metabolic gene cluster controls rice yield by regulating male fertility. Nature Communications 15 (1), 6663 (2024)

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82.

Zeitschriftenartikel

Zhu, F.; Wijesingha Ahchige, M.; Wen, W.; Cheng, Y.; Alseekh, S.; Fernie, A. R.: The natural variance of Arabidopsis secondary metabolism on extended darkness. Scientific Data 11 (1), 841 (2024)

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83.

Zeitschriftenartikel

Chen, J.; Zhang, Y.; Wei, J.; Hu, X.; Yin, H.; Liu, W.; Li, D.; Tian, W.; Hao, Y.; He, Z. et al.; Fernie, A. R.; Chen, W.: Beyond pathways: Accelerated flavonoids candidate identification and novel exploration of enzymatic properties using combined mapping populations of wheat. Plant Biotechnology Journal 22 (7), S. 2033 - 2050 (2024)

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84.

Zeitschriftenartikel

Pérez-Alfocea, F.; Borghi, M.; Guerrero, J. J.; Jiménez, A. R.; Jiménez-Gómez, J. M.; Fernie, A. R.; Bartomeus, I.: Pollinator-assisted plant phenotyping, selection, and breeding for crop resilience to abiotic stresses. The Plant Journal 119 (1), S. 56 - 64 (2024)

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85.

Zeitschriftenartikel

Tripathi, D.; Bhat, J.; Antoniou, C.; Kandhol, N.; Singh, V.; Fernie, A. R.; Fotopoulos, V.: Redox Regulation by Priming Agents Toward a Sustainable Agriculture. Plant and Cell Physiology 65 (7), S. 1087 - 1102 (2024)

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86.

Zeitschriftenartikel

Yin, Z.; Huang, W.; Li, K.; Fernie, A. R.; Yan, S.: Advances in mass spectrometry imaging for plant metabolomics—Expanding the analytical toolbox. The Plant Journal 119 (5), S. 2168 - 2180 (2024)

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87.

Zeitschriftenartikel

Yoshida, T.; Mergner, J.; Yang, Z.; Liu, J.; Kuster, B.; Fernie, A. R.; Grill, E.: Integrating multi-omics data reveals energy and stress signaling activated by abscisic acid in Arabidopsis. The Plant Journal 119 (2), S. 1112 - 1133 (2024)

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88.

Zeitschriftenartikel

Pei, L.; Gao, X.; Tian, X.; Liu, N.; Chen, M.; Fernie, A. R.; Li, H.: A microRNA528-ZmLac3 module regulates low phosphate tolerance in maize. The Plant Journal 118 (6), S. 2233 - 2248 (2024)

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89.

Zeitschriftenartikel

Yuan, H.; Jiangfang, Y.; Liu, Z.; Su, R.; Li, Q.; Fang, C.; Huang, S.; Liu, X.; Fernie, A. R.; Luo, J.: WTV2.0: A high-coverage plant volatilomics method with a comprehensive selective ion monitoring acquisition mode. Molecular Plant 17 (6), S. 972 - 985 (2024)

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90.

Zeitschriftenartikel

Yin, B.; Jia, J.; Sun, X.; Hu, X.; Ao, M.; Liu, W.; Tian, Z.; Liu, H.; Li, D.; Tian, W. et al.; Hao, Y.; Xia, X.; Sade, N.; Brotman, Y.; Fernie, A. R.; Chen, J.; He, Z.; Chen, W.: Dynamic metabolite QTL analyses provide novel biochemical insights into kernel development and nutritional quality improvement in common wheat. Plant Communications 5 (5), 100792 (2024)

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91.

Zeitschriftenartikel

Fernie, A. R.; Bulut, M.: How cauliflower got its curd. Nature Genetics 56, S. 1042 - 1044 (2024)

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92.

Zeitschriftenartikel

John, A.; Krämer, M.; Lehmann, M.; Kunz, H.-H.; Aarabi, F.; Alseekh, S.; Fernie, A. R.; Sommer, F.; Schroda, M.; Zimmer, D. et al.; Mühlhaus, T.; Peisker, H.; Gutbrod, K.; Dörmann, P.; Neunzig, J.; Philippar, K.; Neuhaus, H. E.: Degradation of FATTY ACID EXPORT PROTEIN1 by RHOMBOID-LIKE PROTEASE11 contributes to cold tolerance in Arabidopsis. The Plant Cell 36 (5), S. 1937 - 1962 (2024)

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93.

Zeitschriftenartikel

Lai, D.; Zhang, K.; He, Y.; Fan, Y.; Li, W.; Shi, Y.; Gao, Y.; Huang, X.; He, J.; Zhao, H. et al.; Lu, X.; Xiao, Y.; Cheng, J.; Ruan, J.; Georgiev, M. I.; Fernie, A. R.; Zhou, M.: Multi-omics identification of a key glycosyl hydrolase gene FtGH1 involved in rutin hydrolysis in Tartary buckwheat (Fagopyrum tataricum). Plant Biotechnology Journal 22 (5), S. 1206 - 1223 (2024)

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94.

Zeitschriftenartikel

Li, R.; Rosado-Souza, L.; Sampathkumar, A.; Fernie, A. R.: The relationship between cell wall and postharvest physiological deterioration of fresh produce. Plant Physiology and Biochemistry 210, 108568 (2024)

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95.

Zeitschriftenartikel

Yu, S.; Zhu, M.; Li, P.; Zuo, H.; Li, J.; Li, Y.; Peng, A.; Huang, J.; Fernie, A. R.; Liu, Z. et al.; Zhao, J.: Dissection of the spatial dynamics of biosynthesis, transport, and turnover of major amino acids in tea plants (Camellia sinensis). Horticulture Research 11 (5), uhae060 (2024)

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96.

Zeitschriftenartikel

Fernie, A. R.; Sonnewald, U.; Sampathkumar, A.: Metabolism and development. Russian Journal of Plant Physiology 295, 154208 (2024)

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97.

Zeitschriftenartikel

Qiu, H.; Zhang, X.; Zhang, Y.; Jiang, X.; Ren, Y.; Gao, D.; Zhu, X.; Usadel, B.; Fernie, A. R.; Wen, W.: Depicting the genetic and metabolic panorama of chemical diversity in the tea plant. Plant Biotechnology Journal 22, S. 1001 - 1016 (2024)

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98.

Zeitschriftenartikel

Liu, F.; Fernie, A. R.; Zhang, Y.: Plant gene co-expression defines the biosynthetic pathway of neuroactive alkaloids. Molecular Plant 17 (3), S. 372 - 374 (2024)

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99.

Zeitschriftenartikel

Bao, Y.-J.; Chen, J.-X.; Zhang, Y.; Fernie, A. R.; Zhang, J.; Huang, B.-X.; Zhu, F.-Y.; Cao, F.-L.: Emerging role of jasmonic acid in woody plant development. Advanced Agrochem 3 (1), S. 26 - 38 (2024)

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100.

Zeitschriftenartikel

Bortlik, J.; Lühle, J.; Alseekh, S.; Weiste, C.; Fernie, A. R.; Dröge-Laser, W.; Börnke, F.: DOMAIN OF UNKNOWN FUNCTION581-9 negatively regulates SnRK1 kinase activity. Plant Physiology 194 (3), S. 1853 - 1869 (2024)

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