Publications of Dirk Hincha

Journal Article (129)

1.
Journal Article
Haas, M.; Sprenger, H.; Zuther, E.; Peters, R.; Seddig, S.; Walther, D.; Kopka, J.; Hincha, D. K.; Koehl, K. I.: Can Metabolite- and Transcript-Based Selection for Drought Tolerance in Solanum tuberosum Replace Selection on Yield in Arid Environments? Frontiers in Plant Science 11, 1071 (2020)
2.
Journal Article
Illgen, S.; Zintl, S.; Zuther, E.; Hincha, D. K.; Schmülling, T.: Characterisation of the ERF102 to ERF105 genes of Arabidopsis thaliana and their role in the response to cold stress. Plant Molecular Biology 103, pp. 303 - 320 (2020)
3.
Journal Article
Knox-Brown, P.; Rindfleisch, T.; Günther, A.; Balow, K.; Bremer, A.; Walther, D.; Miettinen, M.S.; Hincha, D. K.; Thalhammer, A.: Similar yet different–structural and functional diversity among arabidopsis thaliana LEA_4 proteins. International Journal of Molecular Sciences 21 (8), 2794 (2020)
4.
Journal Article
Schaarschmidt, S.; Fischer, A.; Zuther, E.; Hincha, D. K.: Evaluation of seven different rna-seq alignment tools based on experimental data from the model plant arabidopsis thaliana. International Journal of Molecular Sciences 21 (5), 1720 (2020)
5.
Journal Article
Schaarschmidt, S.; Lawas, L.M.F.; Glaubitz, U.; Li, X.; Erban, A.; Kopka, J.; Krishna Jagadish, S.V.; Hincha, D. K.; Zuther, E.: Season affects yield and metabolic profiles of rice (Oryza sativa) under high night temperature stress in the field. International Journal of Molecular Sciences 21 (9), 3187 (2020)
6.
Journal Article
Vyse, K.; Faivre, L.; Romich, M.; Pagter, M.; Schubert, D.; Hincha, D. K.; Zuther, E.: Transcriptional and Post-Transcriptional Regulation and Transcriptional Memory of Chromatin Regulators in Response to Low Temperature. Frontiers in Plant Science 11, 39 (2020)
7.
Journal Article
Vyse, K.; Penzlin, J.; Sergeant, K.; Hincha, D. K.; Arora, R.; Zuther, E.: Repair of sub-lethal freezing damage in leaves of Arabidopsis thaliana. BMC Plant Biology 20 (1), 35 (2020)
8.
Journal Article
Lawas, L.M.F.; Erban, A.; Kopka, J.; Jagadish, S. V. K.; Zuther, E.; Hincha, D. K.: Metabolic responses of rice source and sink organs during recovery from combined drought and heat stress in the field. GigaScience 8 (8), giz102 (2019)
9.
Journal Article
Lawas, L.M.F.; Li, X.; Erban, A.; Kopka, J.; Jagadish, S. V. K.; Zuther, E.; Hincha, D. K.: Metabolic responses of rice cultivars with different tolerance to combined drought and heat stress under field conditions. GigaScience 8 (5), giz050 (2019)
10.
Journal Article
Koubaa, S.; Bremer, A.; Hincha, D. K.; Brini, F.: Structural properties and enzyme stabilization function of the intrinsically disordered LEA_4 protein TdLEA3 from wheat. Scientific Reports 9 (1), 3720 (2019)
11.
Journal Article
Pérez-Díaz, J.; Pérez-Díaz, J.R.; Medeiros, D.B.; Zuther, E.; Hong, C.-Y.; Nunes-Nesi, A.; Hincha, D. K.; Ruiz-Lara, S.; Casaretto, J.A.: Transcriptome analysis reveals potential roles of a barley ASR gene that confers stress tolerance in transgenic rice. Journal of Plant Physiology 238, pp. 29 - 39 (2019)
12.
Journal Article
Schwachtje, J.; Whitcomb, S. J.; Firmino, A.; Zuther, E.; Hincha, D. K.; Kopka, J.: Induced, Imprinted, and Primed Responses to Changing Environments: Does Metabolism Store and Process Information? Frontiers in Plant Science 10, 106 (2019)
13.
Journal Article
Shou, K.; Bremer, A.; Rindfleisch, T.; Knox-Brown, P.; Hirai, M.; Rekas, A.; Garvey, C.J.; Hincha, D. K.; Stadler, A.M.; Thalhammer, A.: Conformational selection of the intrinsically disordered plant stress protein COR15A in response to solution osmolarity-an X-ray and light scattering study. Physical Chemistry Chemical Physics 21 (34), pp. 18727 - 18740 (2019)
14.
Journal Article
Takahashi, D.; Gorka, M.; Erban, A.; Graf, A.; Kopka, J.; Zuther, E.; Hincha, D. K.: Both cold and sub-zero acclimation induce cell wall modification and changes in the extracellular proteome in Arabidopsis thaliana. Scientific Reports 9 (1), 2289 (2019)
15.
Journal Article
Vyse, K.; Pagter, M.; Zuther, E.; Hincha, D. K.: Deacclimation after cold acclimation - a crucial, but widely neglected part of plant winter survival. The Journal of Experimental Biology 70 (18), pp. 4595 - 4604 (2019)
16.
Journal Article
Zuther, E.; Schaarschmidt, S.; Fischer, A.; Erban, A.; Pagter, M.; Mubeen, U.; Giavalisco, P.; Kopka, J.; Sprenger, H.; Hincha, D. K.: Molecular signatures associated with increased freezing tolerance due to low temperature memory in Arabidopsis. Plant, Cell and Environment 42 (3- SI), pp. 854 - 873 (2019)
17.
Journal Article
Beine-Golovchuk, O.; Firmino, A.; Dabrowska, A.; Schmidt, S.; Erban, A.; Walther, D.; Zuther, E.; Hincha, D. K.; Kopka, J.: Plant Temperature Acclimation and Growth Rely on Cytosolic Ribosome Biogenesis Factor Homologs. Plant Physiology 176 (3), pp. 2251 - 2276 (2018)
18.
Journal Article
Etemadi, M.; Zuther, E.; Müller, H.; Hincha, D. K.; Berg, G.: Ecotype-Dependent Response of Bacterial Communities Associated with Arabidopsis to Cold Acclimation. Phytobiomes 2 (1), pp. 3 - 13 (2018)
19.
Journal Article
Etemadi, M.; Zuther, E.; Müller, H.; Hincha, D. K.; Berg, G.: Ecotype-dependent response of bacterial communities associated with Arabidopsis to cold acclimation. Phytobiomes Journal 2 (1), pp. 3 - 13 (2018)
20.
Journal Article
Lawas, L.M.F.; Shi, W.; Yoshimoto, M.; Hasegawa, T.; Hincha, D. K.; Zuther, E.; Jagadish, S.V.K.: Combined drought and heat stress impact during flowering and grain filling in contrasting rice cultivars grown under field conditions. Field Crops Research 229, pp. 66 - 77 (2018)
21.
Journal Article
Lawas, L.M.F.; Zuther, E.; Jagadish, S. V. K.; Hincha, D. K.: Molecular mechanisms of combined heat and drought stress resilience in cereals. Current Opinion in Plant Biology 45, pp. 212 - 217 (2018)
22.
Journal Article
Mubeen, U.; Jueppner, J.; Alpers, J.; Hincha, D. K.; Giavalisco, P.: Target of Rapamycin Inhibition in Chlamydomonas reinhardtii Triggers de Novo Amino Acid Synthesis by Enhancing Nitrogen Assimilation. The Plant Cell 30 (10), pp. 2240 - 2254 (2018)
23.
Journal Article
Navarro-Retamal, C.; Bremer, A.; Ingolfsson, H. I.; Alzate-Morales, J.; Caballero, J.; Thalhammer, A.; Gonzalez, W.; Hincha, D. K.: Folding and Lipid Composition Determine Membrane Interaction of the Disordered Protein COR15A. Biophysical Journal 115 (6), pp. 968 - 980 (2018)
24.
Journal Article
Sprenger, H.; Erban, A.; Seddig, S.; Rudack, K.; Thalhammer, A.; Le, M. Q.; Walther, D.; Zuther, E.; Koehl, K. I.; Kopka, J. et al.; Hincha, D. K.: Metabolite and transcript markers for the prediction of potato drought tolerance. Plant Biotechnology Journal 16 (4), pp. 939 - 950 (2018)
25.
Journal Article
Pagter, M.; Alpers, J.; Erban, A.; Kopka, J.; Zuther, E.; Hincha, D. K.: Rapid transcriptional and metabolic regulation of the deacclimation process in cold acclimated Arabidopsis thaliana. BMC Genomics 18 (1), 731 (2017)
26.
Journal Article
Andersen, U. B.; Kjaer, K. H.; Erban, A.; Alpers, J.; Hincha, D. K.; Kopka, J.; Zuther, E.; Pagter, M.: Impact of seasonal warming on overwintering and spring phenology of blackcurrant. Environmental and Experimental Botany 140, pp. 96 - 109 (2017)
27.
Journal Article
Bolt, S.; Zuther, E.; Zintl, S.; Hincha, D. K.; Schmülling, T.: ERF105 is a transcription factor gene of Arabidopsis thaliana required for freezing tolerance and cold acclimation. Plant, Cell and Environment 40 (1), pp. 108 - 120 (2017)
28.
Journal Article
Bremer, A.; Kent, B.; Hauß, T.; Thalhammer, A.; Yepuri, N. R.; Darwish, T. A.; Garvey, C. J.; Bryant, G.; Hincha, D. K.: Intrinsically Disordered Stress Protein COR15A Resides at the Membrane Surface during Dehydration. Biophysical Journa 113 (3), pp. 572 - 579 (2017)
29.
Journal Article
Bremer, A.; Wolff, M.; Thalhammer, A.; Hincha, D. K.: Folding of intrinsically disordered plant LEA proteins is driven by glycerol-induced crowding and the presence of membranes. The FEBS Journal 284 (6), pp. 919 - 936 (2017)
30.
Journal Article
Glaubitz, U.; Li, X.; Schaedel, S.; Erban, A.; Sulpice, R.; Kopka, J.; Hincha, D. K.; Zuther, E.: Integrated analysis of rice transcriptomic and metabolomic responses to elevated night temperatures identifies sensitivity- and tolerance-related profiles. Plant, Cell and Environment 40 (1), pp. 121 - 137 (2017)
31.
Journal Article
Ntatsi, G.; Savvas, D.; Papasotiropoulos, V.; Katsileros, A.; Zrenner, R. M.; Hincha, D. K.; Zuther, E.; Schwarz, D.: Rootstock Sub-Optimal Temperature Tolerance Determines Transcriptomic Responses after Long-Term Root Cooling in Rootstocks and Scions of Grafted Tomato Plants. Frontiers in Plant Science 8, 911 (2017)
32.
Journal Article
Juszczak, I.; Cvetkovic, J.; Zuther, E.; Hincha, D. K.; Baier, M.: Natural Variation of Cold Deacclimation Correlates with Variation of Cold-Acclimation of the Plastid Antioxidant System in Arabidopsis thaliana Accessions. Frontiers in Plant Science 7, 305 (2016)
33.
Journal Article
Hilker, M.; Schwachtje, J.; Baier, M.; Balazadeh, S.; Bäurle, I.; Geiselhardt, S.; Hincha, D. K.; Kunze, R.; Mueller-Roeber, B.; Rillig, M. C. et al.; Rolff, J.; Romeis, T.; Schmülling, T.; Steppuhn, A.; van Dongen, J.; Whitcomb, S. J.; Wurst, S.; Zuther, E.; Kopka, J.: Priming and memory of stress responses in organisms lacking a nervous system. Biological Reviews 91 (4), pp. 1118 - 1133 (2016)
34.
Journal Article
Lee, Y. P.; Funk, C.; Erban, A.; Kopka, J.; Koehl, K. I.; Zuther, E.; Hincha, D. K.: Salt stress responses in a geographically diverse collection of Eutrema/Thellungiella spp. accessions. Functional Plant Biology 43, pp. 590 - 606 (2016)
35.
Journal Article
Navarro-Retamal, C.; Bremer, A.; Alzate-Morales, J.; Caballero, J.; Hincha, D. K.; Gonzalez, W.; Thalhammer, A.: Molecular dynamics simulations and CD spectroscopy reveal hydration-induced unfolding of the intrinsically disordered LEA proteins COR15A and COR15B from Arabidopsis thaliana. Physical Chemistry Chemical Physics 18 (37), pp. 25806 - 25816 (2016)
36.
Journal Article
Popova, A. V.; Hincha, D. K.: Effects of flavonol glycosides on liposome stability during freezing and drying. Biochimica et Biophysica Acta (BBA) - Biomembranes 1858 (12), pp. 3050 - 3060 (2016)
37.
Journal Article
Schulz, E.; Tohge, T.; Zuther, E.; Fernie, A. R.; Hincha, D. K.: Flavonoids are determinants of freezing tolerance and cold acclimation in Arabidopsis thaliana. Scientific Reports 6, 34027 (2016)
38.
Journal Article
Sprenger, H.; Kurowsky, C.; Horn, R.; Erban, A.; Seddig, S.; Rudack, K.; Fischer, A.; Walther, D.; Zuther, E.; Koehl, K. I. et al.; Hincha, D. K.; Kopka, J.: The drought response of potato reference cultivars with contrasting tolerance. Plant Cell Environment 39 (11), pp. 2370 - 2389 (2016)
39.
Journal Article
Schulz, E.; Tohge, T.; Zuther, E.; Fernie, A. R.; Hincha, D. K.: Natural variation in flavonol and anthocyanin metabolism during cold acclimation in Arabidopsis thaliana accessions. Plant, Cell and Environment 38 (8), pp. 1658 - 1672 (2015)
40.
Journal Article
Xu, E.; Vaahtera, L.; Horak, H.; Hincha, D. K.; Heyer, A. G.; Brosche, M.: Quantitative trait loci mapping and transcriptome analysis reveal candidate genes regulating the response to ozone in Arabidopsis thaliana. Plant, Cell and Environment 38 (7), pp. 1418 - 1433 (2015)
41.
Journal Article
Glaubitz, U.; Erban, A.; Kopka, J.; Hincha, D. K.; Zuther, E.: High night temperature strongly impacts TCA cycle, amino acid and polyamine biosynthetic pathways in rice in a sensitivity-dependent manner. Journal of Experimental Botany 66 (20), pp. 6385 - 6397 (2015)
42.
Journal Article
Le, M. Q.; Pagter, M.; Hincha, D. K.: Global changes in gene expression, assayed by microarray hybridization and quantitative RT-PCR, during acclimation of three Arabidopsis thaliana accessions to sub-zero temperatures after cold acclimation. Plant Molecular Biology 87 (1-2), pp. 1 - 15 (2015)
43.
Journal Article
Li, X.; Lawas, L. M. F.; Malo, R.; Glaubitz, U.; Erban, A.; Mauleon, R.; Heuer, S.; Zuther, E.; Kopka, J.; Hincha, D. K. et al.; Jagadish, K. S. V.: Metabolic and transcriptomic signatures of rice floral organs reveal sugar starvation as a factor in reproductive failure under heat and drought stress. Plant, Cell and Environment 38 (10), pp. 2171 - 2192 (2015)
44.
Journal Article
Mucha, S.; Walther, D.; Mueller, T. M.; Hincha, D. K.; Glawischnig, E.: Substantial reprogramming of the Eutrema salsugineum (Thellungiella salsuginea) transcriptome in response to UV and silver nitrate challenge. BMC Plant Biology 15, 137 (2015)
45.
Journal Article
Popova, A. V.; Rausch, S.; Hundertmark, M.; Gibon, Y.; Hincha, D. K.: The intrinsically disordered protein LEA7 from Arabidopsis thaliana protects the isolated enzyme lactate dehydrogenase and enzymes in a soluble leaf proteome during freezing and drying. Biochimica et Biophysica Acta (BBA) - General Subjects 1854 (10 Pt A), pp. 1517 - 1525 (2015)
46.
Journal Article
Sprenger, H.; Rudack, K.; Schudoma, C.; Neumann, A.; Seddig, S.; Peters, R.; Zuther, E.; Kopka, J.; Hincha, D. K.; Walther, D. et al.; Koehl, K. I.: Assessment of drought tolerance and its potential yield penalty in potato. Functional Plant Biology 42 (7), pp. 655 - 667 (2015)
47.
Journal Article
Zuther, E.; Juszczak, I.; Lee, Y. P.; Baier, M.; Hincha, D. K.: Time-dependent deacclimation after cold acclimation in Arabidopsis thaliana accessions. Scientific Reports 5, 12199 (2015)
48.
Journal Article
Thalhammer, A.; Bryant, G.; Sulpice, R.; Hincha, D. K.: Disordered Cold Regulated15 Proteins Protect Chloroplast Membranes during Freezing through Binding and Folding, But Do Not Stabilize Chloroplast Enzymes in Vivo. Plant Physiology 166 (1), pp. 190 - 201 (2014)
49.
Journal Article
Do, P. T.; Drechsel, O.; Heyer, A. G.; Hincha, D. K.; Zuther, E.: Changes in free polyamine levels, expression of polyamine biosynthesis genes, and performance of rice cultivars under salt stress: a comparison with responses to drought. Frontiers in Plant Science 5, p. 182 - 182 (2014)
50.
Journal Article
Dang, N. X. D.; Popova, A. V.; Hundertmark, M.; Hincha, D. K.: Functional characterization of selected LEA proteins from Arabidopsis thaliana in yeast and in vitro. Planta 240, pp. 325 - 336 (2014)
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