Publications of the Group

Duarte, G. T.; Pandey, P. K.; Vaid, N.; Alseekh, S.; Fernie, A. R.; Nikoloski, Z.; Laitinen, R.: Plasticity of rosette size in response to nitrogen availability is controlled by an RCC1-family protein. Plant, Cell and Environment (2021)

Duarte, G. T.; Volkova, P. Y.; Geras'kin, S. A.: A Pipeline for Non-model Organisms for de novo Transcriptome Assembly, Annotation, and Gene Ontology Analysis Using Open Tools: Case Study with Scots Pine. Bio-protocol 11 (3), e3912 (2021)

Jiang, L.; Yoshida, T.; Stiegert, S.; Yu, J.; Alseekh, S.; Lenhard, M.; Pérez-Alfocea, F.; Fernie, A. R.: Multi-omics approach reveals the contribution of KLU to leaf longevity and drought tolerance. Plant Physiology 185 (2), pp. 352 - 368 (2021)

Kanbar, A.; Shakeri, E.; Alhajturki, D.; Riemann, M.; Bunzel, M.; Morgano, M.T.; Stapf, D.; Nick, P.: Sweet versus grain sorghum: Differential sugar transport and accumulation are linked with vascular bundle architecture. Industrial Crops and Products 167, 113550 (2021)

Volkova, P.Y.; Duarte, G. T.; Kazakova, E.A.; Makarenko, E.S.; Bitarishvili, S.V.; Bondarenko, V.S.; Perevolotskii, A.N.; Geras'kin, S.A.; Garbaruk, D.K.; Turchin, L.M.: Radiosensitivity of herbaceous plants to chronic radiation exposure: Field study in the Chernobyl exclusion zone. Science of the Total Environment 777, 146206 (2021)

Vaid, N.; Ishihara, H.; Plötner, B.; Sageman-Furnas, K.; Wiszniewski, A.A.G.; Laitinen, R.: Leaf chlorosis in Arabidopsis thaliana hybrids is associated with transgenerational decline and imbalanced ribosome number. New Phytologist 228 (3), pp. 989 - 1000 (2020)

Laitinen, R.; Nikoloski, Z.: Genetic basis of plasticity in plants. Journal of Experimental Botany 70 (3), pp. 739 - 745 (2019)

Pandey, P. K.; Quilichini, T. D.; Vaid, N.; Gao, P.; Xiang, D.; Datla, R.: Versatile and multifaceted CRISPR/Cas gene editing tool for plant research. Seminars in Cell & Developmental Biology 96, pp. 107 - 114 (2019)

Pandey, P. K.; Yu, J.; Omranian, N.; Alseekh, S.; Vaid, N.; Fernie, A. R.; Nikoloski, Z.; Laitinen, R.: Plasticity in metabolism underpins local responses to nitrogen in Arabidopsis thaliana populations. Plant Direct 3 (11), e00186 (2019)

Vaid, N.; Laitinen, R.: Diverse paths to hybrid incompatibility in Arabidopsis. The Plant Journal 97 (1-SI), pp. 199 - 213 (2019)

Janowski, M.; Zoschke, R.; Scharff, L. B.; Martinez-Jaime, S.; Ferrari, C.; Proost, S.; Ng Wei Xiong, J.; Omranian, N.; Musialak-Lange, M.; Nikoloski, Z. et al.; Graf, A.; Schöttler, M. A.; Sampathkumar, A.; Vaid, N.; Mutwil, M.: AtRsgA from Arabidopsis thaliana is important for maturation of the small subunit of the chloroplast ribosome. The Plant Journal 96 (2), pp. 404 - 420 (2018)

Alhajturki, D.; Muralidharan, S.; Nurmi, M.; Rowan, B. A.; Lunn, J. E.; Boldt, H.; Salem, M.A.; Alseekh, S.; Jorzig, C.; Feil, R. et al.; Giavalisco, P.; Fernie, A. R.; Weigel, D.; Laitinen, R.: Dose-dependent interactions between two loci trigger altered shoot growth in BG-5 × Krotzenburg-0 (Kro-0) hybrids of Arabidopsis thaliana. New Phytologist 217 (1), pp. 392 - 406 (2018)

Cubillos, A.; Tong, H.; Alseekh, S.; de Abreu e Lima, F.; Yu, J.; Fernie, A. R.; Nikoloski, Z.; Laitinen, R.: Inheritance patterns in metabolism and growth in diallel crosses of Arabidopsis thaliana from a single growth habitat. Heredity 120, pp. 463 - 473 (2018)

Ploetner, B.; Nurmi, M.; Fischer, A.; Watanabe, M.; Schneeberger, K.; Holm, S.; Vaid, N.; Schöttler, M. A.; Walther, D.; Hoefgen, R. et al.; Weigel, D.; Laitinen, R.: Chlorosis caused by two recessively interacting genes reveals a role of RNA helicase in hybrid breakdown in Arabidopsis thaliana. The Plant Journal 91 (2), pp. 251 - 262 (2017)

Swiadek, M.; Proost, S.; Sieh, D.; Yu, J.; Todesco, M.; Jorzig, C.; Cubillos, A.; Plötner, B.; Nikoloski, Z.; Chae, E. et al.; Giavalisco, P.; Fischer, A.; Schröder, F.; Kim, S.-T.; Weigel, D.; Laitinen, R.: Novel allelic variants in ACD6 cause hybrid necrosis in local collection of Arabidopsis thaliana. New Phytologist 213 (2), pp. 900 - 915 (2017)

Szymanska, R.; Nowicka, B.; Gabruk, M.; Glinska, S.; Michlewska, S.; Dluzewska, J.; Sawicka, A.; Kruk, J.; Laitinen, R.: Physiological and antioxidant responses of two accessions of Arabidopsis thaliana in different light and temperature conditions. Physiologia Plantarum 154 (2), pp. 194 - 209 (2015)

Kleessen, S.; Laitinen, R.; Fusari, C. M.; Antonio, C.; Sulpice, R.; Fernie, A. R.; Stitt, M.; Nikoloski, Z.: Metabolic efficiency underpins performance trade-offs in growth of Arabidopsis thaliana. Nature Communications 5, 3537 (2014)

Chae, E.; Bomblies, K.; Kim, S.-T.; Karelina, D.; Zaidem, M.; Ossowski, S.; Martín-Pizarro, C.; Laitinen, R.; Rowan, B.; Tenenboim, H. et al.; Lechner, S.; Demar, M.; Habring-Müller, A.; Lanz, C.; Rätsch, G.; Weigel, D.: Species-wide Genetic Incompatibility Analysis Identifies Immune Genes as Hot Spots of Deleterious Epistasis. Cell 159 (6), pp. 1341 - 1351 (2014)

Kleessen, S.; Antonio, C.; Sulpice, R.; Laitinen, R.; Fernie, A. R.; Stitt, M.; Nikoloski, Z.: Structured patterns in geographic variability of metabolic phenotypes in Arabidopsis thaliana. Nature Communications 3, p. 1319 (2012)

Koehl, K. I.; Laitinen, R.: From the Greenhouse to the Real World - Arabidopsis Field Trials and Applications. In: Molecular Mechanisms in Plant Adaptation, pp. 217 - 235. Wiley-Blackwell, Malden (2015)