Publications of B. Mueller-Roeber

Schmidt, R., Schippers, J. H. M., Mieulet, D., Obata, T., Fernie, A. R., Guiderdoni, E. & Mueller-Roeber, B. MULTIPASS, a rice R2R3-type MYB transcription factor, regulates adaptive growth by integrating multiple hormonal pathways. Plant Journal 76, 258–273 (2013).

Schippers, J. H. M., Lai, A. G., Mueller-Roeber, B. & Dijkwel, P. P. Could ROS signals drive tissue-specific clocks? Landes Bioscience 4, 206–208 (2013).

Schmidt, R., Mieulet, D., Hubberten, H. M., Obata, T., Hoefgen, R., Fernie, A. R., Fisahn, J., Segundo, B. S., Guiderdoni, E., Schippers, J. H. M. & Mueller-Roeber, B. SALT-RESPONSIVE ERF1 Regulates Reactive Oxygen Species-Dependent Signaling during the Initial Response to Salt Stress in Rice. The Plant Cell 25, 2115–2131 (2013).

Gliwicka, M., Nowak, K., Balazadeh, S., Mueller-Roeber, B. & Gaj, M. Extensive Modulation of the Transcription Factor Transcriptome during Somatic Embryogenesis in Arabidopsis thaliana. PLoS One 8, (2013).

Matallana-Ramirez, L. P., Rauf, M., Farage-Barhom, S., Dortay, H., Xue, G. P., Droege-Laser, W., Lers, A., Balazadeh, S. & Mueller-Roeber, B. NAC transcription factor ORE1 and senescence-induced BIFUNCTIONAL NUCLEASE1 (BFN1) constitute a regulatory cascade in Arabidopsis. Molecular Plant 6, 1432–1452 (2013).

Mehrnia, M., Balazadeh, S., Zanor, M. I. & Mueller-Roeber, B. EBE, an AP2/ERF Transcription Factor Highly Expressed in Proliferating Cells, Affects Shoot Architecture in Arabidopsis thaliana. Plant Physiology 162, 842–857 (2013).

Nguyen, H. M., Schippers, J. H., Goni-Ramos, O., Christoph, M. P., Dortay, H., van der Hoorn, R. A. & Mueller-Roeber, B. An upstream regulator of the 26S proteasome modulates organ size in Arabidopsis thaliana. Plant Journal 74, 25–36 (2013).

Omranian, N., Klie, S., Mueller-Roeber, B. & Nikoloski, Z. Network-Based Segmentation of Biological Multivariate Time Series. PLoS One 8, e62974 (2013).

Petrov, V., Schippers, J., Benina, M., Minkov, I., Mueller-Roeber, B. & Gechev, T. In search for new players of the oxidative stress network by phenotyping an Arabidopsis T-DNA mutant collection on reactive oxygen species-eliciting chemicals. Plant Omics 6, 46–54 (2013).

Rauf, M., Arif, M., Dortay, H., Matallana-Ramirez, L. P., Waters, M. T., Gil Nam, H., Lim, P. O., Mueller-Roeber, B. & Balazadeh, S. ORE1 balances leaf senescence against maintenance by antagonizing G2-like-mediated transcription. EMBO Reports 14, 382–388 (2013).

Ribeiro, D. M., Mueller-Roeber, B. & Schippers, J. H. Promotion of growth by elevated carbon dioxide is coordinated through a flexible transcriptional network in Arabidopsis. Plant Signaling & Behavior 8, e23356 (2013).

Watanabe, M., Balazadeh, S., Tohge, T., Erban, A., Giavalisco, P., Kopka, J., Mueller-Roeber, B., Fernie, A. R. & Hoefgen, R. Comprehensive dissection of spatio-temporal metabolic shifts in primary, secondary and lipid metabolism during developmental senescence in Arabidopsis thaliana. Plant Physiology 162, 1290–1310 (2013).

Winck, F. V., Arvidsson, S., Mauricio Riano-Pachon, D., Hempel, S., Koseska, A., Nikoloski, Z., Urbina Gomez, D. A., Rupprecht, J. & Mueller-Roeber, B. Genome-Wide Identification of Regulatory Elements and Reconstruction of Gene Regulatory Networks of the Green Alga Chlamydomonas reinhardtii under Carbon Deprivation. PLoS One 8, (2013).

Balazadeh, S., Jaspert, N., Arif, M., Mueller-Roeber, B. & Maurino, V. G. Expression of ROS-responsive genes and transcription factors after metabolic formation of H(2)O(2) in chloroplasts. Frontiers in plant science 3, (2012).

Brotman, Y., Landau, U., Pnini, S., Lisec, J., Balazadeh, S., Mueller-Roeber, B., Zilberstein, A., Willmitzer, L., Chet, I. & Viterbo, A. The LysM Receptor-Like Kinase LysM RLK1 Is Required to Activate Defense and Abiotic-Stress Responses Induced by Overexpression of Fungal Chitinases in Arabidopsis Plants. Molecular Plant 5, 1113–1124 (2012).

Gechev, T. S., Benina, M., Obata, T., Tohge, T., Sujeeth, N., Minkov, I., Hille, J., Temanni, M. R., Marriott, A. S., Bergstrom, E., Thomas-Oates, J., Antonio, C., Mueller-Roeber, B., Schippers, J. H., Fernie, A. R. & Toneva, V. Molecular mechanisms of desiccation tolerance in the resurrection glacial relic Haberlea rhodopensis. Cellular and Molecular Life Sciences 70, 689–709 (2012).

Lai, A. G., Doherty, C. J., Mueller-Roeber, B., Kay, S. A., Schippers, J. H. M. & Dijkwel, P. P. CIRCADIAN CLOCK-ASSOCIATED 1 regulates ROS homeostasis and oxidative stress responses. Proceedings of the National Academy of Sciences of the United States of America 109, 17129–17134 (2012).

Mehterov, N., Balazadeh, S., Hille, J., Toneva, V., Mueller-Roeber, B. & Gechev, T. Oxidative stress provokes distinct transcriptional responses in the stress-tolerant atr7 and stress-sensitive loh2 Arabidopsis thaliana mutants as revealed by multi-parallel quantitative real-time PCR analysis of ROS marker and antioxidant genes. Plant Physiology and Biochemistry 59, 20–29 (2012).

Omidbakhshfard, M. A., Omranian, N., Ahmadi, F. S., Nikoloski, Z. & Mueller-Roeber, B. Effect of salt stress on genes encoding translation-associated proteins in Arabidopsis thaliana. Plant Signaling & Behavior 7, 1095–1102 (2012).

Omranian, N., Mueller-Roeber, B. & Nikoloski, Z. PageRank-based identification of signaling crosstalk from transcriptomics data: the case of Arabidopsis thaliana. Molecular BioSystems 8, 1121–1127 (2012).