Publications of A. R. Fernie

Singh, P., Kumari, A., Khaladhar, V. C., Singh, N., Pathak, P. K., Kumar, V., Kumar, R. J., Jain, P., Thakur, J. K., Fernie, A. R., Bauwe, H., Raghavendra, A. S. & Gupta, K. J. Serine hydroxymethyltransferase6 is involved in growth and resistance against pathogens via ethylene and lignin production in Arabidopsis. The Plant Journal 119, 1920–1936 (2024).

Tariq, A., Meng, M., Jiang, X., Bolger, A., Beier, S., Buchmann, J. P., Fernie, A. R., Wen, W. & Usadel, B. In-depth exploration of the genomic diversity in tea varieties based on a newly constructed pangenome of Camellia sinensis. The Plant Journal 119, 2096–2115 (2024).

Yang, C., Shen, S., Zhan, C., Li, Y., Zhang, R., Lv, Y., Yang, Z., Zhou, J., Shi, Y., Liu, X., Shi, J., Zhang, D., Fernie, A. R. & Luo, J. Variation in a Poaceae-conserved fatty acid metabolic gene cluster controls rice yield by regulating male fertility. Nature Communications 15, (2024).

Zhu, F., Wijesingha Ahchige, M., Wen, W., Cheng, Y., Alseekh, S. & Fernie, A. R. The natural variance of Arabidopsis secondary metabolism on extended darkness. Scientific Data 11, (2024).

Chen, J., Zhang, Y. Q., Wei, J. Q., Hu, X., Yin, H. R., Liu, W., Li, D. Q., Tian, W. F., Hao, Y. F., He, Z. H., Fernie, A. R. & Chen, W. Beyond pathways: Accelerated flavonoids candidate identification and novel exploration of enzymatic properties using combined mapping populations of wheat. Plant Biotechnology Journal 22, 2033–2050 (2024).

Pérez-Alfocea, F., Borghi, M., Guerrero, J. J., Jiménez, A. R., Jiménez-Gómez, J. M., Fernie, A. R. & Bartomeus, I. Pollinator-assisted plant phenotyping, selection, and breeding for crop resilience to abiotic stresses. The Plant Journal 119, 56–64 (2024).

Tripathi, D. K., Bhat, J. A., Antoniou, C., Kandhol, N., Singh, V. P., Fernie, A. R. & Fotopoulos, V. Redox Regulation by Priming Agents Toward a Sustainable Agriculture. Plant and Cell Physiology 65, 1087–1102 (2024).

Yin, Z., Huang, W., Li, K., Fernie, A. R. & Yan, S. Advances in mass spectrometry imaging for plant metabolomics—Expanding the analytical toolbox. The Plant Journal 119, 2168–2180 (2024).

Yoshida, T., Mergner, J., Yang, Z., Liu, J., Kuster, B., Fernie, A. R. & Grill, E. Integrating multi-omics data reveals energy and stress signaling activated by abscisic acid in Arabidopsis. The Plant Journal 119, 1112–1133 (2024).

Pei, L., Gao, X., Tian, X., Liu, N., Chen, M., Fernie, A. R. & Li, H. A microRNA528-ZmLac3 module regulates low phosphate tolerance in maize. The Plant Journal 118, 2233–2248 (2024).

Yuan, H., Jiangfang, Y., Liu, Z., Su, R., Li, Q., Fang, C., Huang, S., Liu, X., Fernie, A. R. & Luo, J. WTV2.0: A high-coverage plant volatilomics method with a comprehensive selective ion monitoring acquisition mode. Molecular Plant 17, 972–985 (2024).

Yin, B., Jia, J., Sun, X., Hu, X., Ao, M., Liu, W., Tian, Z., Liu, H., Li, D., Tian, W., Hao, Y., Xia, X., Sade, N., Brotman, Y., Fernie, A. R., Chen, J., He, Z. & Chen, W. Dynamic metabolite QTL analyses provide novel biochemical insights into kernel development and nutritional quality improvement in common wheat. Plant Communications 5, (2024).

Fernie, A. R. & Bulut, M. How cauliflower got its curd. Nature Genetics 56, 1042–1044 (2024).

John, A., Krämer, M., Lehmann, M., Kunz, H.-H., Aarabi, F., Alseekh, S., Fernie, A. R., Sommer, F., Schroda, M., Zimmer, D., Mühlhaus, T., Peisker, H., Gutbrod, K., Dörmann, P., Neunzig, J., Philippar, K. & Neuhaus, H. E. Degradation of FATTY ACID EXPORT PROTEIN1 by RHOMBOID-LIKE PROTEASE11 contributes to cold tolerance in Arabidopsis. The Plant Cell 36, 1937–1962 (2024).

Lai, D., Zhang, K., He, Y., Fan, Y., Li, W., Shi, Y., Gao, Y., Huang, X., He, J., Zhao, H., Lu, X., Xiao, Y., Cheng, J., Ruan, J., Georgiev, M. I., Fernie, A. R. & Zhou, M. Multi-omics identification of a key glycosyl hydrolase gene FtGH1 involved in rutin hydrolysis in Tartary buckwheat (Fagopyrum tataricum). Plant Biotechnology Journal 22, 1206–1223 (2024).

Li, R., Rosado-Souza, L., Sampathkumar, A. & Fernie, A. R. The relationship between cell wall and postharvest physiological deterioration of fresh produce. Plant Physiology and Biochemistry 210, (2024).

Yu, S., Zhu, M., Li, P., Zuo, H., Li, J., Li, Y., Peng, A., Huang, J., Fernie, A. R., Liu, Z. & Zhao, J. Dissection of the spatial dynamics of biosynthesis, transport, and turnover of major amino acids in tea plants (Camellia sinensis). Horticulture Research 11, (2024).

Fernie, A. R., Sonnewald, U. & Sampathkumar, A. Metabolism and development. Russian Journal of Plant Physiology 295, (2024).

Qiu, H., Zhang, X., Zhang, Y. J., Jiang, X., Ren, Y., Gao, D., Zhu, X., Usadel, B., Fernie, A. R. & Wen, W. Depicting the genetic and metabolic panorama of chemical diversity in the tea plant. Plant Biotechnology Journal 22, 1001–1016 (2024).

Liu, F., Fernie, A. R. & Zhang, Y. J. Plant gene co-expression defines the biosynthetic pathway of neuroactive alkaloids. Molecular Plant 17, 372–374 (2024).