Publications of A. R. Fernie

Yin, H., Liu, W., Hu, X., Jia, J., Liu, M., Wei, J., Cheng, Y., Gong, X., Li, Q., Yan, W., Jia, J., Gao, L., Fernie, A. R. & Chen, W. A wheat phytohormone atlas spanning major tissues across the entire life cycle provides novel insights into cytokinin and jasmonic acid interplay. Molecular Plant 18, 366–382 (2025).

Yoshida, T. & Fernie, A. R. The protein phosphatases of abscisic acid coreceptors mediate carbon metabolism in Arabidopsis. Theoretical and Experimental Plant Physiology 37, (2025).

Zhang, J., Alseekh, S., Fernie, A. R., Qian, D. & Huang, L. Chemical Characterization of Lipids Provides New Insights into Goji Berry Metabolism. ACS Food Science & Technology 5, 761–769 (2025).

Alseekh, S., Klemmer, A., Yan, J., Guo, T. & Fernie, A. R. Embracing plant plasticity or robustness as a means of ensuring food security. Nature Communications 16, (2025).

Barros, J. A. S., Nunes-Nesi, A., Fernie, A. R. & Araújo, W. L. Transcriptional crosstalk linking color, acidity, and aroma in peach. Trends in Plant Science (2025). doi:10.1016/j.tplants.2025.04.003

Casatejada-Anchel, R., Torres-Moncho, A., Anoman, A. D., Budhagatapalli, N., Pérez-Lorences, E., Alcántara-Enguídanos, A., Rosa-Téllez, S., de Souza, L. P., Kumlehn, J., Fernie, A. R., Muñoz-Bertomeu, J. & Ros, R. Metabolic engineering of the serine/glycine network as a means to improve the nitrogen content of crops. Plant Biotechnology Journal 23, 268–280 (2025).

Kappel, S., Frieboes, M. J., Yokoyama, R., Kappel, C., Tóth, S. Z., Fernie, A. R., Jahns, P., Smirnoff, N., Aarabi, F. & Armbruster, U. Developmental and environmental effects on VTC2-dependent leaf ascorbate accumulation and functions. Journal of Experimental Botany (2025). doi:10.1093/jxb/eraf035

Liu, M.-Y., Jiao, Z., Lou, H., Tang, D., Tian, X., Zhou, B.-W., Ruan, J., Fernie, A. R. & Zhang, Q. A glutamine synthetase-DOF transcription factor module regulates N remobilization from source to sink tissues in tea plants. Plant Physiology 197, (2025).

López, C. M., Alseekh, S., Rivas, F. J. M., Fernie, A. R., Prieto, P. & Alamillo, J. M. CRISPR/Cas9 editing of two adenine phosphoribosyl transferase coding genes reveals the functional specialization of adenine salvage proteins in common bean. Journal of Experimental Botany 76, 346–362 (2025).

López-Tubau, J. M., Laibach, N., Burciaga-Monge, A., Alseekh, S., Deng, C. Y., Fernie, A. R., Altabella, T. & Ferrer, A. Differential impact of impaired steryl ester biosynthesis on the metabolome of tomato fruits and seeds. Physiologia Plantarum 177, (2025).

Nascimento, C. P., da Fonseca-Pereira, P., Ferreira-Silva, M., Rosado-Souza, L., Linka, N., Fernie, A. R., Araújo, W. L. & Nunes-Nesi, A. Functional analysis of the extraplastidial TRX system in germination and early stages of development of Arabidopsis thaliana. Plant Science 350, (2025).

Tiozon, R. J. N., Pasion-Uy, E., Alseekh, S., Sartagoda, K. J. D., Gempesaw, S., Tolentino, J. H. G., Fernie, A. R. & Sreenivasulu, N. Lipidomics-based association study reveals genomic signatures of anti-cancer qualities of pigmented rice sprouts. Frontiers in Plant Science 16, (2025).

Wu, S., Zhang, S., Liu, C.-M., Fernie, A. R. & Yan, S. Recent Advances in Mass Spectrometry-based Protein Interactome Studies. Molecular & Cellular Proteomics 24, (2025).

Yu, Y., Li, W., Liu, Y., Liu, Y., Zhang, Q., Ouyang, Y., Ding, W., Xue, Y., Zou, Y., Yan, J., Jia, A., Yan, J., Hao, X., Gou, Y., Zhai, Z., Liu, L., Zheng, Y., Zhang, B., Xu, J., Yang, N., Xiao, Y., Zhuo, L., Lai, Z., Yin, P., Liu, H.-J., Fernie, A. R., Jackson, D. & Yan, J. A Zea genus-specific micropeptide controls kernel dehydration in maize. Cell 188, 44–59 (2025).

D'Auria, J. C. & Fernie, A. R. The BAHD and the bold: the mitochondria's role in alkaloid artistry. Trends in Plant Science 29, 1290–1291 (2024).

Domer, A., Jasinska, W., Rosental, L., Shochat, E., Alseekh, S., Fernie, A. R., Brotman, Y. & Ovadia, O. Comparative analysis of the plasma metabolome of migrating passerines: novel insights into stopover metabolism. Journal of Avian Biology 2025, (2024).

Fontanet-Manzaneque, J. B., Laibach, N., Herrero-García, I., Coleto-Alcudia, V., Blasco-Escámez, D., Zhang, C., Orduña, L., Alseekh, S., Miller, S., Bjarnholt, N., Fernie, A. R., Matus, J. T. & Caño-Delgado, A. I. Untargeted mutagenesis of brassinosteroid receptor SbBRI1 confers drought tolerance by altering phenylpropanoid metabolism in Sorghum bicolor. Plant Biotechnology Journal 22, 3406–3423 (2024).

He, J., Hao, Y., He, Y., Li, W., Shi, Y., Khurshid, M., Lai, D., Ma, C., Wang, X., Li, J., Cheng, J., Fernie, A. R., Ruan, J., Zhang, K. & Zhou, M. Genome-wide associated study identifies FtPMEI13 gene conferring drought resistance in Tartary buckwheat. The Plant Journal 120, 2398–2419 (2024).

Kanojia, A., Lyall, R., Sujeeth, N., Alseekh, S., Martinez Rivas, F. J., Fernie, A. R., Gechev, T. S. & Petrov, V. Physiological and molecular insights into the effect of a seaweed biostimulant on enhancing fruit yield and drought tolerance in tomato. Plant Stress 14, (2024).

Luo, J., He, C., Yan, S., Jiang, C., Chen, A., Li, K., Zhu, Y., Gui, S., Yang, N., Xiao, Y., Wu, S., Zhang, F., Liu, T., Wang, J., Huang, W., Yang, Y., Wang, H., Yang, W., Li, W., Zhuo, L., Fernie, A. R., Zhan, J., Wang, L. & Yan, J. A metabolic roadmap of waxy corn flavor. Molecular Plant 17, 1883–1898 (2024).