Publications of C. Köhler

Yadav, V. K., Santos-González, J. & Köhler, C. INT-Hi-C reveals distinct chromatin architecture in endosperm and leaf tissues of Arabidopsis. Nucleic Acids Research 49, 4371–4385 (2021).

Bachmann, J. A., Tedder, A., Fracassetti, M., Steige, K. A., Lafon-Placette, C., Köhler, C. & Slotte, T. On the origin of the widespread self-compatible allotetraploid Capsella bursa-pastoris (Brassicaceae). Heredity 127, 124–134 (2021).

Dziasek, K., Simon, L., Lafon-Placette, C., Laenen, B., Wärdig, C., Santos-González, J., Slotte, T. & Köhler, C. Hybrid seed incompatibility in Capsella is connected to chromatin condensation defects in the endosperm. PLoS Genetics 17, (2021).

Liu, S., de Jonge, J., Trejo-Arellano, M. S., Santos-Gonzalez, J., Köhler, C. & Hennig, L. Role of H1 and DNA methylation in selective regulation of transposable elements during heat stress. New Phytologist 229, 2238–2250 (2021).

Tomaštíková, E. D., Hafrén, A., Trejo-Arellano, M. S., Rasmussen, S. R., Sato, H., Santos-González, J., Köhler, C., Hennig, L. & Hofius, D. Polycomb Repressive Complex 2 and KRYPTONITE regulate pathogen-induced programmed cell death in Arabidopsis. Plant Physiology 185, 2003–2021 (2021).

Nakamura, M., Batista, R. A., Köhler, C. & Hennig, L. Polycomb Repressive Complex 2-mediated histone modification H3K27me3 is associated with embryogenic potential in Norway spruce. Journal of Experimental Botany 71, 6366–6378 (2020).

Barsh, G. S., Copenhaver, G. P., Köhler, C. & Qu, L.-J. Kingdom Come. PLoS Genetics 16, (2020).

Kralemann, L. E. M., Liu, S., Trejo-Arellano, M. S., Munoz-Viana, R., Köhler, C. & Hennig, L. Removal of H2Aub1 by ubiquitin-specific proteases 12 and 13 is required for stable Polycomb-mediated gene repression in Arabidopsis. Genome Biology 21, (2020).

Qiu, Y. & Köhler, C. Mobility connects: transposable elements wire new transcriptional networks by transferring transcription factor binding motifs. Biochemical Society Transactions 48, 1005–1017 (2020).

Trejo-Arellano, M. S., Mehdi, S., de Jonge, J., Tomastikova, E. D., Köhler, C. & Hennig, L. Dark-Induced Senescence Causes Localized Changes in DNA Methylation. Plant Physiology 182, 949–961 (2020).

Wang, Z., Butel, N., Santos-Gonzalez, J., Borges, F., Yi, J., Martienssen, R. A., Martinez, G. & Köhler, C. Polymerase IV Plays a Crucial Role in Pollen Development in Capsella([OPEN]). The Plant Cell 32, 950–966 (2020).

Bachmann, J. A., Tedder, A., Laenen, B., Fracassetti, M., Desamore, A., Lafon-Placette, C., Steige, K. A., Callot, C., Marande, W., Neuffer, B., Berges, H., Köhler, C., Castric, V. & Slotte, T. Genetic basis and timing of a major mating system shift in Capsella. New Phytologist 224, 505–517 (2019).

Batista, R. A., Figueiredo, D. D., Santos-Gonzalez, J. & Köhler, C. Auxin regulates endosperm cellularization in Arabidopsis. Genes and Development 33, 466–476 (2019).

Batista, R. A., Moreno-Romero, J., Qiu, Y., van Boven, J., Santos-Gonzalez, J., Figueiredo, D. D. & Köhler, C. The MADS-box transcription factor PHERES1 controls imprinting in the endosperm by binding to domesticated transposons. eLife 8, (2019).

Del Toro-De Leon, G. & Köhler, C. Endosperm-specific transcriptome analysis by applying the INTACT system. Plant Reproduction 32, 55–61 (2019).

Moreno-Romero, J., Del Toro-De Leon, G., Yadav, V. K., Santos-Gonzalez, J. & Köhler, C. Epigenetic signatures associated with imprinted paternally expressed genes in the Arabidopsis endosperm. Genome Biology: Biology for the Post-Genomic Era 20, (2019).

Mozgova, I., Wildhaber, T., Trejo-Arellano, M. S., Fajkus, J., Roszak, P., Köhler, C. & Hennig, L. Transgenerational phenotype aggravation in CAF-1 mutants reveals parent-of-origin specific epigenetic inheritance. New Phytologist 220, 908–921 (2018).

Borges, F., Parent, J.-S., van Ex, F., Wolff, P., Martinez, G., Köhler, C. & Martienssen, R. A. Transposon-derived small RNAs triggered by miR845 mediate genome dosage response in Arabidopsis. Nature Genetics 50, 186–192 (2018).

Gomez-Zambrano, A., Crevillen, P., Franco-Zorrilla, J. M., Lopez, J. A., Moreno-Romero, J., Roszak, P., Santos-Gonzalez, J., Jurado, S., Vazquez, J., Köhler, C., Solano, R., Pineiro, M. & Jarillo, J. A. Arabidopsis SWC4 Binds DNA and Recruits the SWR1 Complex to Modulate Histone H2A.Z Deposition at Key Regulatory Genes. Molecular Plant 11, 815–832 (2018).

Lafon-Placette, C., Hatorangan, M. R., Steige, K. A., Cornille, A., Lascoux, M., Slotte, T. & Köhler, C. Paternally expressed imprinted genes associate with hybridization barriers in Capsella. Nature Plants 4, 352–357 (2018).