Publications of A. R. Fernie

Wagner, S., Bernhardt, A., Leuendorf, J. E., Drewke, C., Lytovchenko, A., Mujahed, N., Gurgui, C., Frommer, W. B., Leistner, E., Fernie, A. R. & Hellmann, H. Analysis of the Arabidopsis rsr4-1/pdx1-3 mutant reveals the critical function of the PDX1 protein family in metabolism, development, and vitamin B6 biosynthesis. Plant Cell 18, 1722–1735 (2006).

Baxter, C. J., Carrari, F., Bauke, A., Overy, S., Hill, S. A., Quick, W. P., Fernie, A. R. & Sweetlove, L. J. Fruit carbohydrate metabolism in an introgression line of tomato with increased fruit soluble solids. Plant and Cell Physiology 46, 425–437 (2005).

Carrari, F., Coll-Garcia, D., Schauer, N., Lytovchenko, A., Palacios-Rojas, N., Balbo, I., Rosso, M. & Fernie, A. R. Deficiency of a plastidial adenylate kinase in Arabidopsis results in elevated photosynthetic amino acid biosynthesis and enhanced growth. Plant Physiology 137, 70–82 (2005).

Davies, H. V., Shepherd, L. V. T., Burrell, M. M., Carrari, F., Urbanczyk-Wochniak, E., Leisse, A., Hancock, R. D., Taylor, M., Viola, R., Ross, H., McRae, D., Willmitzer, L. & Fernie, A. R. Modulation of fructokinase activity of potato (Solanum tuberosum) results in substantial shifts in tuber metabolism. Plant and Cell Physiology 46, 1103–1115 (2005).

Fernie, A. R., Geigenberger, P. & Stitt, M. Flux an important, but neglected, component of functional glenomics. Current Opinion in Plant Biology 8, 174–182 (2005).

Geigenberger, P., Regierer, B., Nunes-Nesi, A., Leisse, A., Urbanczyk-Wochniak, E., Springer, F., van Dongen, J. T., Kossmann, J. & Fernie, A. R. Inhibition of de novo pyrimidine synthesis in growing potato tubers leads to a compensatory stimulation of the pyrimidine salvage pathway and a subsequent increase in biosynthetic performance. Plant Cell 17, 2077–2088 (2005).

Ishizaki, K., Larson, T. R., Schauer, N., Fernie, A. R., Graham, I. A. & Leaver, C. J. The critical role of Arabidopsis electron-transfer flavoprotein: Ubiquinone oxidoreductase during dark-induced starvation. Plant Cell 17, 2587–2600 (2005).

Kopka, J., Schauer, N., Krueger, S., Birkemeyer, C., Usadel, B., Bergmueller, E., Doermann, P., Weckwerth, W., Gibon, Y., Stitt, M., Willmitzer, L., Fernie, A. R. & Steinhauser, D. GMD@CSB.DB: the Golm Metabolome Database. Bioinformatics 21, 1635–1638 (2005).

Lytovchenko, A., Hajirezaei, M.-R., Eickmeier, I., Mittendorf, V., Sonnewald, U., Willmitzer, L. & Fernie, A. R. Expression of an Escherichia coli phosphoglucomutase in potato (Solanum tuberosum L.) results in minor changes in tuber metabolism and a considerable delay in tuber sprouting. Planta 221, 915–927 (2005).

Lytovchenko, A., Schauer, N., Willmitzer, L. & Fernie, A. R. Tuber-specific cytosolic expression of a bacterial phosphoglucomutase in potato (Solanum tuberosum L.) dramatically alters carbon partitioning. Plant and Cell Physiology 46, 588–597 (2005).

Nunes-Nesi, A., Carrari, F., Lytovchenko, A., Smith, A. M. O., Loureiro, M. E., Ratcliffe, R. G., Sweetlove, L. J. & Fernie, A. R. Enhanced photosynthetic performance and growth as a consequence of decreasing mitochondrial malate dehydrogenase activity in transgenic tomato plants. Plant Physiology 137, 611–622 (2005).

Schauer, N. & Fernie, A. R. Intraspezifische Introgression - wie die Genetik biochemische Phänotype beeinflusst. GenomXpress 1, 14–16 (2005).

Schauer, N., Steinhauser, D., Strelkov, S., Schomburg, D., Allison, G., Moritz, T., Lundgren, K., Roessner-Tunali, U., Forbes, M. G., Willmitzer, L., Fernie, A. R. & Kopka, J. GC-MS libraries for the rapid identification of metabolites in complex biological samples. FEBS Letters 579, 1332–1337 (2005).

Schauer, N., Zamir, D. & Fernie, A. R. Metabolic profiling of leaves and fruit of wild species tomato: a survey of the Solanum lycopersicum complex. Journal of Experimental Botany 56, 297–307 (2005).

Studart-Guimaraes, C., Gibon, Y., Frankel, N., Wood, C. C., Zanor, M. I., Fernie, A. R. & Carrari, F. Identification and characterisation of the alpha and beta subunits of succinyl CoA ligase of tomato. Plant Molecular Biology 59, 781–791 (2005).

Urbanczyk-Wochniak, E., Baxter, C., Kolbe, A., Kopka, J., Sweetlove, L. J. & Fernie, A. R. Profiling of diurnal patterns of metabolite and transcript abundance in potato (Solanum tuberosum) leaves. Planta 221, 891–903 (2005).

Urbanczyk-Wochniak, E. & Fernie, A. R. Metabolic profiling reveals altered nitrogen nutrient regimes have diverse effects on the metabolism of hydroponically-grown tomato (Solanum lycopersicum) plants. Journal of Experimental Botany 56, 309–321 (2005).

Bender-Machado, L., Bauerlein, M., Carrari, F., Schauer, N., Lytovchenko, A., Gibon, Y., Kelly, A. A., Loureiro, M. E., Muller-Rober, B., Willmitzer, L. & Fernie, A. R. Expression of a yeast acetyl CoA hydrolase in the mitochondrion of tobacco plants inhibits growth and restricts photosynthesis. Plant Molecular Biology 55, 645–662 (2004).

Debnam, P. M., Fernie, A. R., Leisse, A., Golding, A., Bowsher, C. G., Grimshaw, C., Knight, J. S. & Emes, M. J. Altered activity of the P2 isoform of plastidic glucose 6-phosphate dehydrogenase in tobacco (Nicotiana tabacum cv. Samsun) causes changes in carbohydrate metabolism and response to oxidative stress in leaves. Plant Journal 38, 49–59 (2004).

Fridman, E., Carrari, F., Liu, Y. S., Fernie, A. R. & Zamir, D. Zooming in on a quantitative trait for tomato yield using interspecific introgressions. Science 305, 1786–1789 (2004).