Publications of A. R. Fernie

Ribeiro, D. M.; Araujo, W. L.; Fernie, A. R.; Schippers, J. H.; Mueller-Roeber, B.: Translatome and metabolome effects triggered by gibberellins during rosette growth in Arabidopsis. Journal of Experimental Botany 63 (7), pp. 2769 - 2786 (2012)

Rohrmann, J.; McQuinn, R.; Giovannoni, J.; Fernie, A. R.; Tohge, T.: Tissue specificity and differential expression of transcription factors in tomato provide hints of unique regulatory networks during fruit ripening. Plant Signaling & Behavior 7 (12), pp. 1639 - 1647 (2012)

Steinhauser, D.; Fernie, A. R.; Araujo, W. L.: Unusual cyanobacterial TCA cycles: not broken just different. Trends in Plant Science 17 (9), pp. 503 - 509 (2012)

Szecowka, M.; Osorio, S.; Obata, T.; Araujo, W. L.; Rohrmann, J.; Nunes-Nesi, A.; Fernie, A. R.: Decreasing the Mitochondrial Synthesis of Malate in Potato Tubers Does Not Affect Plastidial Starch Synthesis, Suggesting That the Physiological Regulation of ADPglucose Pyrophosphorylase Is Context Dependent. Plant Physiology 160 (4), pp. 2227 - 2238 (2012)

Timm, S.; Florian, A.; Arrivault, S.; Stitt, M.; Fernie, A. R.; Bauwe, H.: Glycine decarboxylase controls photosynthesis and plant growth. FEBS Letters 586 (20), pp. 3692 - 3697 (2012)

Timm, S.; Mielewczik, M.; Florian, A.; Frankenbach, S.; Dreissen, A.; Hocken, N.; Fernie, A. R.; Walter, A.; Bauwe, H.: High-to-Low CO2 Acclimation Reveals Plasticity of the Photorespiratory Pathway and Indicates Regulatory Links to Cellular Metabolism of Arabidopsis. PLoS One 7 (8), p. e42809 (2012)

Tohge, T.; Fernie, A. R.: Annotation of plant gene function via combined genomics, metabolomics and informatics. Journal of visualized experiments (64), e3487, p. e3487 (2012)

Toubiana, D.; Semel, Y.; Tohge, T.; Beleggia, R.; Cattivelli, L.; Rosental, L.; Nikoloski, Z.; Zamir, D.; Fernie, A. R.; Fait, A.: Metabolic Profiling of a Mapping Population Exposes New Insights in the Regulation of Seed Metabolism and Seed, Fruit, and Plant Relations. PLoS Genetics 8 (3), p. e1002612 (2012)

Trofimova, L. K.; Araujo, W. L.; Strokina, A. A.; Fernie, A. R.; Bettendorff, L.; Bunik, V. I.: Consequences of the alpha-Ketoglutarate Dehydrogenase Inhibition for Neuronal Metabolism and Survival: Implications for Neurodegenerative Diseases. Current Medicinal Chemistry 19 (34), pp. 5895 - 5906 (2012)

Witt, S.; Galicia, L.; Lisec, J.; Cairns, J.; Tiessen, A.; Araus, J. L.; Palacios-Rojas, N.; Fernie, A. R.: Metabolic and Phenotypic Responses of Greenhouse-Grown Maize Hybrids to Experimentally Controlled Drought Stress. Molecular Plant 5 (2), pp. 401 - 417 (2012)

Wormit, A.; Butt, S. M.; Chairam, I.; McKenna, J. F.; Nunes-Nesi, A.; Kjaer, L.; O'Donnelly, K.; Fernie, A. R.; Woscholski, R.; Barter, M. C. et al.; Hamann, T.: Osmosensitive changes of carbohydrate metabolism in response to cellulose biosynthesis inhibition. Plant Physiology 159 (1), pp. 105 - 117 (2012)

Wu, A.; Allu, A. D.; Garapati, P.; Siddiqui, H.; Dortay, H.; Zanor, M. I.; Asensi-Fabado, M. A.; Munne-Bosch, S.; Antonio, C.; Tohge, T. et al.; Fernie, A. R.; Kaufmann, K.; Xue, G. P.; Mueller-Roeber, B.; Balazadeh, S.: JUNGBRUNNEN1, a reactive oxygen species-responsive NAC transcription factor, regulates longevity in Arabidopsis. The Plant Cell 24 (2), pp. 482 - 506 (2012)

Allen, A. E.; Dupont, C. L.; Obornik, M.; Horak, A.; Nunes-Nesi, A.; McCrow, J. P.; Zheng, H.; Johnson, D. A.; Hu, H. H.; Fernie, A. R. et al.; Bowler, C.: Evolution and metabolic significance of the urea cycle in photosynthetic diatoms. Nature 473 (7346), pp. 203 - 209 (2011)

Almeida, J.; Quadrana, L.; Asis, R.; Setta, N.; de Godoy, F.; Bermudez, L.; Otaiza, S. N.; da Silva, J. V. C.; Fernie, A. R.; Carrari, F. et al.; Rossi, M.: Genetic dissection of vitamin E biosynthesis in tomato. Journal of Experimental Botany 62 (11), pp. 3781 - 3798 (2011)

Angelovici, R.; Fait, A.; Fernie, A. R.; Galili, G.: A seed high-lysine trait is negatively associated with the TCA cycle and slows down Arabidopsis seed germination. New Phytologist 189 (1), pp. 148 - 159 (2011)

Araujo, W. L.; Ishizaki, K.; Nunes-Nesi, A.; Tohge, T.; Larson, T. R.; Krahnert, I.; Balbo, I.; Witt, S.; Doermann, P.; Graham, I. A. et al.; Leaver, C. J.; Fernie, A. R.: Analysis of a Range of Catabolic Mutants Provides Evidence That Phytanoyl-Coenzyme A Does Not Act as a Substrate of the Electron-Transfer Flavoprotein/Electron-Transfer Flavoprotein:Ubiquinone Oxidoreductase Complex in Arabidopsis during Dark-Induced Senescence. Plant Physiology 157 (1), pp. 55 - 69 (2011)

Araujo, W. L.; Nunes-Nesi, A.; Fernie, A. R.: Fumarate: Multiple functions of a simple metabolite. Phytochemistry 72 (9), pp. 838 - 843 (2011)

Araujo, W. L.; Nunes-Nesi, A.; Osorio, S.; Usadel, B.; Fuentes, D.; Nagy, R.; Balbo, I.; Lehmann, M.; Studart-Witkowski, C.; Tohge, T. et al.; Martinoia, E.; Jordana, X.; DaMatta, F. M.; Fernie, A. R.: Antisense Inhibition of the Iron-Sulphur Subunit of Succinate Dehydrogenase Enhances Photosynthesis and Growth in Tomato via an Organic Acid-Mediated Effect on Stomatal Aperture. The Plant Cell 23 (2), pp. 600 - 627 (2011)

Bazzini, A. A.; Manacorda, C. A.; Tohge, T.; Conti, G.; Rodriguez, M. C.; Nunes-Nesi, A.; Villanueva, S.; Fernie, A. R.; Carrari, F.; Asurmendi, S.: Metabolic and miRNA Profiling of TMV Infected Plants Reveals Biphasic Temporal Changes. PLoS One 6 (12), p. e28466 (2011)

Caldana, C.; Degenkolbe, T.; Cuadros-Inostroza, A.; Klie, S.; Sulpice, R.; Leisse, A.; Steinhauser, D.; Fernie, A. R.; Willmitzer, L.; Hannah, M. A.: High-density kinetic analysis of the metabolomic and transcriptomic response of Arabidopsis to eight environmental conditions. The Plant Journal 67 (5), pp. 869 - 884 (2011)