Publications of J. T. van Dongen

Ramirez-Aguilar, S. J.; Keuthe, M.; Rocha, M.; Fedyaev, V. V.; Kramp, K.; Gupta, K. J.; Rasmusson, A. G.; Schulze, W. X.; van Dongen, J. T.: The Composition of Plant Mitochondrial Supercomplexes Changes with Oxygen Availability. Journal of Biological Chemistry 286 (50), pp. 43045 - 43053 (2011)

Sandmann, M.; Skłodowski, K.; Gajdanowicz, P.; Michard, E.; Rocha, M.; Gomez-Porras, J. L.; González, W.; Correa, L. G. G.; Ramirez-Aguilar, S. J.; Cuin, T. A. et al.; van Dongen, J. T.; Thibaud, J.-B.; Dreyer, I.: The K (+) battery-regulating Arabidopsis K(+) channel AKT2 is under the control of multiple post-translational steps. Plant Signaling & Behavior 6 (4), pp. 558 - 562 (2011)

Schwachtje, J.; Karojet, S.; Thormaehlen, I.; Bernholz, C.; Kunz, S.; Brouwer, S.; Schwochow, M.; Koehl, K. I.; van Dongen, J. T.: A Naturally Associated Rhizobacterium of Arabidopsis thaliana Induces a Starvation-Like Transcriptional Response while Promoting Growth. PLoS One 6 (12), p. e29382 (2011)

van Dongen, J. T.; Gupta, K. J.; Ramirez-Aguilar, S. J.; Araujo, W. L.; Nunes-Nesi, A.; Fernie, A. R.: Regulation of respiration in plants: A role for alternative metabolic pathways. Journal of Plant Physiology 168 (12), pp. 1434 - 1443 (2011)

Zabalza, A.; Orcaray, L.; Igal, M.; Schauer, N.; Fernie, A. R.; Geigenberger, P.; van Dongen, J. T.; Royuela, M.: Unraveling the role of fermentation in the mode of action of acetolactate synthase inhibitors by metabolic profiling. Journal of Plant Physiology 168 (13), pp. 1568 - 1575 (2011)

Licausi, F.; van Dongen, J. T.; Giuntoli, B.; Novi, G.; Santaniello, A.; Geigenberger, P.; Perata, P.: HRE1 and HRE2, two hypoxia-inducible ethylene response factors, affect anaerobic responses in Arabidopsis thaliana. Plant Journal 62 (2), pp. 302 - 315 (2010)

Rocha, M.; Licausi, F.; Araujo, W. L.; Nunes-Nesi, A.; Sodek, L.; Fernie, A. R.; van Dongen, J. T.: Glycolysis and the Tricarboxylic Acid Cycle Are Linked by Alanine Aminotransferase during Hypoxia Induced by Waterlogging of Lotus japonicus. Plant Physiology 152 (3), pp. 1501 - 1513 (2010)

Rocha, M.; Sodek, L.; Licausi, F.; Hameed, M. W.; Dornelas, M. C.; van Dongen, J. T.: Analysis of alanine aminotransferase in various organs of soybean (Glycine max) and in dependence of different nitrogen fertilisers during hypoxic stress. Amino Acids 39 (4), pp. 1043 - 1053 (2010)

Steinfath, M.; Strehmel, N.; Peters, R.; Schauer, N.; Groth, D.; Hummel, J.; Steup, M.; Selbig, J.; Kopka, J.; Geigenberger, P. et al.; van Dongen, J. T.: Discovering plant metabolic biomarkers for phenotype prediction using an untargeted approach. Plant Biotechnology Journal 8 (8), pp. 900 - 911 (2010)

Strehmel, N.; Praeger, U.; Koenig, C.; Fehrle, I.; Erban, A.; Geyer, M.; Kopka, J.; van Dongen, J. T.: Time course effects on primary metabolism of potato (Solanum tuberosum) tuber tissue after mechanical impact. Postharvest Biology and Technology 56 (2), pp. 109 - 116 (2010)

van Dongen, J. T.; Schauer, N.: Metabolic marker as selection tool in plant breeding. Information Systems for Biotechnology News Reports 11, pp. 7 - 10 (2010)

Arrivault, S.; Guenther, M.; Ivakov, A.; Feil, R.; Vosloh, D.; van Dongen, J. T.; Sulpice, R.; Stitt, M.: Use of reverse-phase liquid chromatography, linked to tandem mass spectrometry, to profile the Calvin cycle and other metabolic intermediates in Arabidopsis rosettes at different carbon dioxide concentrations. Plant Journal 59 (5), pp. 824 - 839 (2009)

Gupta, K. J.; Zabalza, A.; van Dongen, J. T.: Regulation of respiration when the oxygen availability changes. Physiologia Plantarum 137 (4), pp. 383 - 391 (2009)

Rasmusson, A. G.; Fernie, A. R.; van Dongen, J. T.: Alternative oxidase: a defence against metabolic fluctuations? Physiologia Plantarum 137 (4), pp. 371 - 382 (2009)

van Dongen, J. T.; Frohlich, A.; Ramirez-Aguilar, S. J.; Schauer, N.; Fernie, A. R.; Erban, A.; Kopka, J.; Clark, J.; Langer, A.; Geigenberger, P.: Transcript and metabolite profiling of the adaptive response to mild decreases in oxygen concentration in the roots of arabidopsis plants. Annals of Botany 103 (2), pp. 269 - 280 (2009)

Zabalza, A.; van Dongen, J. T.; Froehlich, A.; Oliver, S. N.; Faix, B.; Gupta, K. J.; Schmalzlin, E.; Igal, M.; Orcaray, L.; Royuela, M. et al.; Geigenberger, P.: Regulation of Respiration and Fermentation to Control the Plant Internal Oxygen Concentration. Plant Physiology 149 (2), pp. 1087 - 1098 (2009)

Hoehenwarter, W.; van Dongen, J. T.; Wienkoop, S.; Steinfath, M.; Hummel, J.; Erban, A.; Sulpice, R.; Regierer, B.; Kopka, J.; Geigenberger, P. et al.; Weckwerth, W.: A rapid approach for phenotype-screening and database independent detection of cSNP/protein polymorphism using mass accuracy precursor alignment. Proteomics 8 (20), pp. 4214 - 4225 (2008)

Oliver, S. N.; Lunn, J. E.; Urbanczyk-Wochniak, E.; Lytovchenko, A.; van Dongen, J. T.; Faix, B.; Schmalzlin, E.; Fernie, A. R.; Geigenberger, P.: Decreased Expression of Cytosolic Pyruvate Kinase in Potato Tubers Leads to a Decline in Pyruvate Resulting in an in Vivo Repression of the Alternative Oxidase. Plant Physiology 148 (3), pp. 1640 - 1654 (2008)

Rumpler, M.; Woesz, A.; Dunlop, J. W. C.; van Dongen, J. T.; Fratzl, P.: The effect of geometry on three-dimensional tissue growth. Journal of the Royal Society Interface 5 (27), pp. 1173 - 1180 (2008)

Kolbe, A.; Oliver, S. N.; Fernie, A. R.; Stitt, M.; van Dongen, J. T.; Geigenberger, P.: Combined transcript and metabolite profiling of Arabidopsis leaves reveals fundamental effects of the thiol-disulfide status on plant metabolism. Plant Physiology 141 (2), pp. 412 - 422 (2006)