Publications of A. Fernie

Timm, S.; Florian, A.; Wittmiss, M.; Jahnke, A.; Hagemann, M.; Fernie, A.; Bauwe, H.: Serine acts as metabolic signal for the transcriptional control of photorespiration-related genes in Arabidopsis thaliana. Plant Physiology 162 (1), pp. 379 - 389 (2013)

Tohge, T.; Watanabe, M.; Hoefgen, R.; Fernie, A. R.: Shikimate and phenylalanine biosynthesis in the green lineage. Frontiers in Plant Science 4, p. 62 (2013)

Watanabe, M.; Balazadeh, S.; Tohge, T.; Erban, A.; Giavalisco, P.; Kopka, J.; Mueller-Roeber, B.; Fernie, A. R.; Hoefgen, R.: Comprehensive dissection of spatio-temporal metabolic shifts in primary, secondary and lipid metabolism during developmental senescence in Arabidopsis thaliana. Plant Physiology 162 (3), pp. 1290 - 1310 (2013)

Tohge, T.; Fernie, A. R.: Co-expression and co-responses: within and beyond transcription. Frontiers in Plant Science 3, 248 (2012)

Alejandro, S.; Lee, Y.; Tohge, T.; Sudre, D.; Osorio, S.; Park, J.; Bovet, L.; Lee, Y.; Geldner, N.; Fernie, A. R. et al.; Martinoia, E.: AtABCG29 Is a Monolignol Transporter Involved in Lignin Biosynthesis. Current Biology 22 (13), pp. 1207 - 1212 (2012)

Amid, A.; Lytovchenko, A.; Fernie, A. R.; Warren, G.; Thorlby, G. J.: The sensitive to freezing3 mutation of Arabidopsis thaliana is a cold-sensitive allele of homomeric acetyl-CoA carboxylase that results in cold-induced cuticle deficiencies. Journal of Experimental Botany 63 (14), pp. 5289 - 5299 (2012)

Araujo, W. L.; Fernie, A. R.: Systems biology of gibberellin induced plant cell growth. Frontiers in Plant Science 3, p. 173 (2012)

Araujo, W. L.; Nunes-Nesi, A.; Nikoloski, Z.; Sweetlove, L. J.; Fernie, A. R.: Metabolic control and regulation of the tricarboxylic acid cycle in photosynthetic and heterotrophic plant tissues. Plant, Cell and Environment 35 (1), pp. 1 - 21 (2012)

Araujo, W. L.; Tohge, T.; Nunes-Nesi, A.; Daloso, D. M.; Nimick, M.; Krahnert, I.; Bunik, V. I.; Moorhead, G. B.; Fernie, A. R.: Phosphonate analogs of 2-oxoglutarate perturb metabolism and gene expression in illuminated Arabidopsis leaves. Frontiers in plant science 3, p. 114 (2012)

Araujo, W. L.; Tohge, T.; Osorio, S.; Lohse, M.; Balbo, I.; Krahnert, I.; Sienkiewicz-Porzucek, A.; Usadel, B.; Nunes-Nesi, A.; Fernie, A. R.: Antisense Inhibition of the 2-Oxoglutarate Dehydrogenase Complex in Tomato Demonstrates Its Importance for Plant Respiration and during Leaf Senescence and Fruit Maturation. The Plant Cell 24 (6), pp. 2328 - 2351 (2012)

Caldana, C.; Fernie, A. R.; Willmitzer, L.; Steinhauser, D.: Unraveling retrograde signaling pathways: finding candidate signaling molecules via metabolomics and systems biology driven approaches. Frontiers in Plant Science 3, p. 267 (2012)

Chen, L. Q.; Qu, X. Q.; Hou, B. H.; Sosso, D.; Osorio, S.; Fernie, A. R.; Frommer, W. B.: Sucrose Efflux Mediated by SWEET Proteins as a Key Step for Phloem Transport. Science 335 (6065), pp. 207 - 211 (2012)

Colmsee, C.; Mascher, M.; Czauderna, T.; Hartmann, A.; Schluter, U.; Zellerhoff, N.; Schmitz, J.; Brautigam, A.; Pick, T. R.; Alter, P. et al.; Gahrtz, M.; Witt, S.; Fernie, A. R.; Bornke, F.; Fahnenstich, H.; Bucher, M.; Dresselhaus, T.; Weber, A. P.; Schreiber, F.; Scholz, U.; Sonnewald, U.: OPTIMAS-DW: A comprehensive transcriptomics, metabolomics, ionomics, proteomics and phenomics data resource for maize. BMC plant biology 12 (1), p. 245 (2012)

Cronje, C.; George, G. M.; Fernie, A. R.; Bekker, J.; Kossmann, J.; Bauer, R.: Manipulation of L: -ascorbic acid biosynthesis pathways in Solanum lycopersicum: elevated GDP-mannose pyrophosphorylase activity enhances L: -ascorbate levels in red fruit. Planta 235 (3), pp. 553 - 564 (2012)

Detmann, K. C.; Araujo, W. L.; Martins, S. C. V.; Sanglard, L. M. V. P.; Reis, J. V.; Detmann, E.; Rodrigues, F. A.; Nunes-Nesi, A.; Fernie, A. R.; DaMatta, F. M.: Silicon nutrition increases grain yield, which, in turn, exerts a feed-forward stimulation of photosynthetic rates via enhanced mesophyll conductance and alters primary metabolism in rice. New Phytologist 196 (3), pp. 752 - 762 (2012)

Draffehn, A. M.; Durek, P.; Nunes-Nesi, A.; Stich, B.; Fernie, A. R.; Gebhardt, C.: Tapping natural variation at functional level reveals allele specific molecular characteristics of potato invertase Pain-1. Plant, Cell and Environment 35 (12), pp. 2143 - 2154 (2012)

Fernie, A. R.; Stitt, M.: On the discordance of metabolomics with proteomics and transcriptomics: coping with increasing complexity in logic, chemistry, and network interactions scientific correspondence. Plant Physiology 158 (3), pp. 1139 - 1145 (2012)

Florez-Sarasa, I.; Araujo, W. L.; Wallstrom, S. V.; Rasmusson, A. G.; Fernie, A. R.; Ribas-Carbo, M.: Light-responsive metabolite and transcript levels are maintained following a dark-adaptation period in leaves of Arabidopsis thaliana. New Phytologist 195 (1), pp. 136 - 148 (2012)

Gechev, T. S.; Benina, M.; Obata, T.; Tohge, T.; Sujeeth, N.; Minkov, I.; Hille, J.; Temanni, M. R.; Marriott, A. S.; Bergstrom, E. et al.; Thomas-Oates, J.; Antonio, C.; Mueller-Roeber, B.; Schippers, J. H.; Fernie, A. R.; Toneva, V.: Molecular mechanisms of desiccation tolerance in the resurrection glacial relic Haberlea rhodopensis. Cellular and Molecular Life Sciences 70 (4), pp. 689 - 709 (2012)

Geisler, D. A.; Päpke, C.; Obata, T.; Nunes-Nesi, A.; Matthes, A.; Schneitz, K.; Maximova, E.; Araujo, W. L.; Fernie, A. R.; Persson, S.: Downregulation of the delta-Subunit Reduces Mitochondrial ATP Synthase Levels, Alters Respiration, and Restricts Growth and Gametophyte Development in Arabidopsis. The Plant Cell 24 (7), pp. 2792 - 2811 (2012)