Publications of A. R. Fernie

Batista-Silva, W.; de Oliveira; Carvalho, A.; Oliveira Martins, A.; Siqueira, J. A.; Rodrigues-Salvador, A.; Omena-Garcia, R. P.; Medeiros, D.B.; Peres, L. E. P.; Ribeiro, D. M. et al.; Zsögön, A.; Fernie, A. R.; Nunes-Nesi, A.; Araújo, W. L.: Reduced auxin signalling through the cyclophilin DIAGEOTROPICA impacts tomato fruit development and metabolism during ripening. Journal of Experimental Botany, erac143 (2022)

Einhardt, A.M.; Oliveira, L.M.; Ferreira, S.; Araújo, W.L.; Medeiros, D.B.; Fernie, A. R.; Rodrigues, F.Á.: Defense responses and oxidative metabolism of glyphosate-resistant soybean plants infected by Phakopsora pachyrhizi modulated by glyphosate and nickel. Physiological and Molecular Plant Pathology 118, 101817 (2022)

Luo, Y.; Zhang, M.; Liu, Y.; Liu, J.; Li, W.; Chen, G.; Peng, Y.; Jin, M.; Wei, W.; Jian, L. et al.; Yan, J.; Fernie, A. R.; Yan, J.: Genetic variation in YIGE1 contributes to ear length and grain yield in maize. New Phytologist 234 (2), pp. 513 - 526 (2022)

Naves, E. R.; Scossa, F.; Araújo, W. L.; Nunes-Nesi, A.; Fernie, A. R.; Zsögön, A.: Heterosis and reciprocal effects for agronomic and fruit traits in Capsicum pepper hybrids. Scientia Horticulturae 295, 110821 (2022)

Powell, A. F.; Feder, A.; Li, J.; Schmidt, M. H.-W.; Courtney, L.; Alseekh, S.; Jobson, E. M.; Vogel, A.; Xu, Y.; Lyon, D. et al.; Dumschott, K.; McHale, M.; Sulpice, R.; Bao, K.; Lal, R.; Duhan, A.; Hallab, A.; Denton, A. K.; Bolger, M. E.; Fernie, A. R.; Hind, S. R.; Mueller, L. A.; Martin, G. B.; Fei, Z.; Martin, C.; Giovannoni, J. J.; Strickler, S. R.; Usadel, B.: A Solanum lycopersicoides reference genome facilitates insights into tomato specialized metabolism and immunity. The Plant Journal (2022)

Rivas, F.J.M.; Blanco-Portales, R.; Moyano, E.; Alseekh, S.; Caballero, J. L.; Schwab, W.; Fernie, A. R.; Muñoz-Blanco, J.; Molina-Hidalgo, F. J.: Strawberry fruit FanCXE1 carboxylesterase is involved in the catabolism of volatile esters during the ripening process. Horticulture Research, uhac095 (2022)

Sageman-Furnas, K.; Nurmi, M.; Contag, M.; Plötner, B.; Alseekh, S.; Wiszniewski, A.A.G.; Fernie, A. R.; Smith, L. M.; Laitinen, R. A.: A. thaliana Hybrids Develop Growth Abnormalities Through Integration of Stress, Hormone and Growth Signalling. Plant and Cell Physiology (2022)

Sreenivasulu, N.; Fernie, A. R.: Diversity: current and prospective secondary metabolites for nutrition and medicine. Current Opinion in Biotechnology 74, pp. 164 - 170 (2022)

Zhu, F.; Wijesingha Ahchige, M.; Brotman, Y.; Alseekh, S.; Zsögön, A.; Fernie, A. R.: Bringing more players into play: Leveraging stress in genome wide association studies. Journal of Plant Physiology 271, 153657 (2022)

Chen, W.; Chen, L.; Zhang, X.; Guo, N. Y.; Wan, M.; Zhao, X.; Yin, P.; Cai, L.; Xu, J.; Zhang, L. et al.; Han, Y.; Xiao, Y.; Xu, G.; Wang, Y.; Wang, S.; Wu, S.; Yang, F.; Jackson, D.; Cheng, J.; Chen, S.; Sun, C.; Qin, F.; Tian, F.; Fernie, A. R.; Li, J.; Yan, J.; Yang, X.: Convergent selection of a WD40 protein that enhances grain yield in maize and rice. Science 375 (6587), eabg7985 (2022)

Chen, M.; Huang, W.; Yin, Z.; Zhang, W.; Kong, Q.; Wu, S.; Li, W.; Bai, Z.; Fernie, A. R.; Huang, X. et al.; Yan, S.: Environmentally-driven metabolite and lipid variations correspond to altered bioactivities of black wolfberry fruit. Food Chemistry 372, 131342 (2022)

Zhou, J.; Liu, C.; Chen, Q.; Liu, L.; Niu, S.; Chen, R.; Li, K.; Sun, Y.; Shi, Y.; Yang, C. et al.; Shen, S.; Li, Y.; Xing, J.; Yuan, H.; Liu, X.; Fang, C.; Fernie, A. R.; Luo, J.: Integration of rhythmic metabolome and transcriptome provides insights into the transmission of rhythmic fluctuations and temporal diversity of metabolism in rice. SCIENCE CHINA-LIFE SCIENCES (2022)

Borghi, M.; Arrivault, S.; Günther, M.; Medeiros, D.B.; Dell'Aversana, E.; Fusco, G.; Carillo, P.; Ludwig, M.; Fernie, A. R.; Lunn, J. E. et al.; Stitt, M.: Metabolic profiles in C-3, C-3-C-4 intermediate, C-4-like, and C-4 species in the genus Flaveria. Journal of Experimental Botany 73 (5), pp. 1581 - 1601 (2022)

Rui, G.; Bourceret, A.; Guan, R.; Dorau, K.; Mansfeldt, T.; Omidbakhshfard, M. A.; Medeiros, D.B.; Fernie, A. R.; Hofmann, J.; Sonnewald, U. et al.; Mayer, J.; Gerlach, N.; Bucher, M.; Garrido-Oter, R.; Spaepen, S.; Schulze-Lefert, P.: Maize Field Study Reveals Covaried Microbiota and Metabolic Changes in Roots over Plant Growth. mBio 13 (2), e02584-21 (2022)

Skirycz, A.; Caldana, C.; Fernie, A. R.: Regulation of Plant Primary Metabolism - How Results From Novel Technologies Are Extending Our Understanding From Classical Targeted Approaches. Critical Reviews in Plant Sciences (2022)

Zhang, Z.; Shi, Q.; Wang, B.; Ma, A.; Wang, Y.; Xue, Q.; Shen, B.; Hamaila, H.; Tang, T.; Qi, X. et al.; Fernie, A. R.; Luo, J.; Li, X.: Jujube metabolome selection determined the edible properties acquired during domestication. The Plant Journal 109 (5), pp. 1116 - 1133 (2022)

Fernie, A. R.; Alseekh, S.: Metabolomic selection–based machine learning improves fruit taste prediction. Proceedings of the National Academy of Sciences of the United States of America 199 (9), e2201078119 (2022)

Salem, M.A.; Aborehab, N.; Al-Karmalawy, A.; Fernie, A. R.; Alseekh, S.; Ezzat, S.: Potential Valorization of Edible Nuts By-Products: Exploring the Immune-Modulatory and Antioxidants Effects of Selected Nut Shells Extracts in Relation to Their Metabolic Profiles. Antioxidants: open access journal 11 (3), 462 (2022)

Salem, M.A.; Ezzat, S.M.; Ahmed, K.A.; Alseekh, S.; Fernie, A. R.; Essam, R.M.: A Comparative Study of the Antihypertensive and Cardioprotective Potentials of Hot and Cold Aqueous Extracts of Hibiscus sabdariffa L. in Relation to Their Metabolic Profiles. Frontiers in Pharmacology 13, 840478 (2022)

Liu, Y.; Fernie, A. R.; Tohge, T.: Diversification of Chemical Structures of Methoxylated Flavonoids and Genes Encoding Flavonoid-O-Methyltransferases. Plants 11 (4), 564 (2022)