Publications of A. Bar-Even

Bar-Even, A.; Noor, E.; Flamholz, A.; Milo, R.: Design and analysis of metabolic pathways supporting formatotrophic growth for electricity-dependent cultivation of microbes. SI 1827 (8-9), pp. 1039 - 1047 (2013)

Flamholz, A.; Noor, E.; Bar-Even, A.; Liebermeister, W.; Milo, R.: Glycolytic strategy as a tradeoff between energy yield and protein cost. Proceedings of the National Academy of Sciences of the United States of America 110 (24), pp. 10039 - 10044 (2013)

Bar-Even, A.; Flamholz, A.; Noor, E.; Milo, R.: Thermodynamic constraints shape the structure of carbon fixation pathways. Biochimica et Biophysica Acta-Bioenergetics 1817 (9), pp. 1646 - 1659 (2012)

Bar-Even, A.; Flamholz, A.; Noor, E.; Milo, R.: Rethinking glycolysis: on the biochemical logic of metabolic pathways. Nature Chemical Biology 8 (6), pp. 509 - 517 (2012)

Flamholz, A.; Noor, E.; Bar-Even, A.; Milo, R.: eQuilibrator-the biochemical thermodynamics calculator. Nucleic Acids Research 40 (D1), pp. D770 - D775 (2012)

Noor, E.; Bar-Even, A.; Flamholz, A.; Lubling, Y.; Davidi, D.; Milo, R.: An integrated open framework for thermodynamics of reactions that combines accuracy and coverage. Bioinformatics 28 (15), pp. 2037 - 2044 (2012)

Bar-Even, A.; Noor, E.; Flamholz, A.; Buescher, J. M.; Milo, R.: Hydrophobicity and Charge Shape Cellular Metabolite Concentrations. PLoS Computational Biology 7 (10), e1002166 (2011)

Bar-Even, A.; Noor, E.; Savir, Y.; Liebermeister, W.; Davidi, D.; Tawfik, D. S.; Milo, R.: The Moderately Efficient Enzyme: Evolutionary and Physicochemical Trends Shaping Enzyme Parameters. Biochemistry 50 (21), pp. 4402 - 4410 (2011)

Bar-Even, A.; Noor, E.; Lewis, N. E.; Milo, R.: Design and analysis of synthetic carbon fixation pathways. Proceedings of the National Academy of Sciences of the United States of America 107 (19), pp. 8889 - 8894 (2010)

Bar-Even, A.; Paulsson, J.; Maheshri, N.; Carmi, M.; O'Shea, E.; Pilpel, Y.; Barkai, N.: Noise in protein expression scales with natural protein abundance. Nature Genetics 38 (6), pp. 636 - 643 (2006)

Shenhav, B.; Bar-Even, A.; Kafri, R.; Lancet, D.: Polymer GARD: Computer simulation of covalent bond formation in reproducing molecular assemblies. Origins of Life and Evolution of the Biosphere 35 (2), pp. 111 - 133 (2005)

Kafri, R.; Bar-Even, A.; Pilpel, Y.: Transcription control reprogramming in genetic backup circuits. Nature Genetics 37 (3), pp. 295 - 299 (2005)

Yanai, I.; Benjamin, H.; Shmoish, M.; Chalifa-Caspi, V.; Shklar, M.; Ophir, R.; Bar-Even, A.; Horn-Saban, S.; Safran, M.; Domany, E. et al.; Lancet, D.; Shmueli, O.: Genome-wide midrange transcription profiles reveal expression level relationships in human tissue specification. Bioinformatics 21 (5), pp. 650 - 659 (2005)

Wenk, S.; Yishai, O.; Lindner, S. N.; Bar-Even, A.: An Engineering Approach for Rewiring Microbial Metabolism. In: ENZYMES IN SYNTHETIC BIOLOGY, pp. 329 - 367 (Ed. Scrutton, N.). Academic Press, Cambridge, MA (2018)

Bar-Even, A.; Shenhav, B.; Kafri, R.; Lancet, D.: The lipid world: From catalytic and informational headgroups to micelle replication and evolution without nucleic acids. In: Life in the Universe: From the Miller Experiment to the Search for Life on Other Worlds, pp. 111 - 114 (2004)

Lancet, D.; Benjamin-Rodrig, H.; Shmoish, M.; Chalifa-Caspi, V.; Shklar, M.; Ophir, R.; Bar-Even, A.; Horn-Saban, S.; Safran, M.; Domany, E. et al.; Yanai, I.; Shmueli, O.: Whole genome expression patterns: the importance of being suppressed. In Journal of Neurochemistry, 90, p. 130 - 130. 35th Annual Meeting of the Transactions-of-the-American-Society-for-Neurochemistry, New York, NY, August 14, 2004 - August 18, 2004. Raven Press [etc.], New York (2004)

Bar-Even, A.; Milo, R.; Noor, E.; Yishai, O.: Use of the reductive glycine pathway for generating formatotrophic and autotrophic microorganisms. (2013)

Milo, R.; Bar-Even, A.; Noor, E.: Enzymatic systems for carbon fixation and methods of generating same. WO2011099006A2 (2011)

Noor, E.; Flamholz, A.; Liebermeister, W.; Bar-Even, A.; Milo, R.: A note on the kinetics of enzyme action: A decomposition that highlights thermodynamic effects. (2013)

Bar-Even, A.; Noor, E.; Milo, R.: A survey of carbon fixation pathways through a quantitative lens. (2012)