Publications of D. Walther
All genres
Journal Article (85)
61.
Journal Article
26 (13), pp. 1671 - 1672 (2010)
Modeling RNA loops using sequence homology and geometric constraints. Bioinformatics 62.
Journal Article
14 (3), pp. 249 - 259 (2010)
Dynamic Transcriptional and Metabolic Responses in Yeast Adapting to Temperature Stress. Omics-a Journal of Integrative Biology 63.
Journal Article
11, p. 607 (2010)
The complexity of gene expression dynamics revealed by permutation entropy. BMC Bioinformatics 64.
Journal Article
14 (3), pp. 261 - 274 (2010)
Metabolic Pathway Relationships Revealed by an Integrative Analysis of the Transcriptional and Metabolic Temperature Stress-Response Dynamics in Yeast. OMICS: A Journal of Integrative Biology 65.
Journal Article
37 (9), p. e66 (2009)
Identification and classification of ncRNA molecules using graph properties. Nucleic Acids Research 66.
Journal Article
69 (1-2), pp. 133 - 153 (2009)
Expression profiling of rice cultivars differing in their tolerance to long-term drought stress. Plant Molecular Biology 67.
Journal Article
10, p. 117 (2009)
Detection and characterization of 3D-signature phosphorylation site motifs and their contribution towards improved phosphorylation site prediction in proteins. BMC Bioinformatics 68.
Journal Article
9 (4), pp. 964 - 988 (2009)
Plant phosphoproteomics: An update. Proteomics 69.
Journal Article
9 (7), pp. 1916 - 1924 (2009)
Ratio-dependent significance thresholds in reciprocal N-15-labeling experiments as a robust tool in detection of candidate proteins responding to biological treatment. Proteomics 70.
Journal Article
10, p. 209 (2009)
ChlamyCyc: an integrative systems biology database and web-portal for Chlamydomonas reinhardtii. BMC Genomics 71.
Journal Article
150 (3), pp. 1541 - 1555 (2009)
Identification of Nutrient-Responsive Arabidopsis and Rapeseed MicroRNAs by Comprehensive Real-Time Polymerase Chain Reaction Profiling and Small RNA Sequencing. Plant Physiology 72.
Journal Article
2, p. 100 (2008)
The integrated analysis of metabolic and protein interaction networks reveals novel molecular organizing principles. BMC Systems Biology 73.
Journal Article
13 (1), pp. 14 - 19 (2008)
Highway or byway: the metabolic role of the GABA shunt in plants. Trends in Plant Science 74.
Journal Article
36 (Database issue), pp. D1015 - D1021 (2008)
PhosPhAt: a database of phosphorylation sites in Arabidopsis thaliana and a plant-specific phosphorylation site predictor. Nucleic Acids Research 75.
Journal Article
4, p. 11 (2008)
A plant resource and experiment management system based on the Golm Plant Database as a basic tool for omics research. Plant Methods 76.
Journal Article
3, pp. 16 - 17 (2008)
Robin - Microarray Experimentanalyse leicht gemacht. GenomXPress: Informationen aus der Deutschen Genomforschung 77.
Journal Article
179 (1), pp. 157 - 166 (2008)
Metabolomics- and proteomics-assisted genome annotation and analysis of the draft metabolic network of Chlamydomonas reinhardtii. Genetics 78.
Journal Article
8, p. 216 (2007)
ProMEX: a mass spectral reference database for proteins and protein phosphorylation sites. BMC Bioinformatics 79.
Journal Article
23 (9), pp. 1164 - 1167 (2007)
pcaMethods - a bioconductor package providing PCA methods for incomplete data. Bioinformatics 80.
Journal Article
3 (2), p. e11 (2007)
The Regulatory Code for Transcriptional Response Diversity and Its Relation to Genome Structural Properties in A. thaliana. PLoS Genetics