Publications of A. R. Fernie

Journal Article (1113)

41.
Journal Article
Barros, J.A.S.; Nunes-Nesi, A.; Fernie, A. R.; Araújo, W.L.: Transcriptional crosstalk linking color, acidity, and aroma in peach. Trends in Plant Science (2025)
42.
Journal Article
Casatejada-Anchel, R.; Torres-Moncho, A.; Anoman, A. D.; Budhagatapalli, N.; Pérez-Lorences, E.; Alcántara-Enguídanos, A.; Rosa-Téllez, S.; de Souza, L. P.; Kumlehn, J.; Fernie, A. R. et al.; Muñoz-Bertomeu, J.; Ros, R.: Metabolic engineering of the serine/glycine network as a means to improve the nitrogen content of crops. Plant Biotechnology Journal 23 (1), pp. 268 - 280 (2025)
43.
Journal Article
Kappel, S.; Frieboes, M. J.; Yokoyama, R.; Kappel, C.; Tóth, S. Z.; Fernie, A. R.; Jahns, P.; Smirnoff, N.; Aarabi, F.; Armbruster, U.: Developmental and environmental effects on VTC2-dependent leaf ascorbate accumulation and functions. Journal of Experimental Botany, eraf035 (2025)
44.
Journal Article
Liu, M.-Y.; Jiao, Z.; Lou, H.; Tang, D.; Tian, X.; Zhou, B.-W.; Ruan, J.; Fernie, A. R.; Zhang, Q.: A glutamine synthetase-DOF transcription factor module regulates N remobilization from source to sink tissues in tea plants. Plant Physiology 197 (1), kiae644 (2025)
45.
Journal Article
López, C.; Alseekh, S.; Rivas, F.; Fernie, A. R.; Prieto, P.; Alamillo, J.: CRISPR/Cas9 editing of two adenine phosphoribosyl transferase coding genes reveals the functional specialization of adenine salvage proteins in common bean. Journal of Experimental Botany 76 (2), pp. 346 - 362 (2025)
46.
Journal Article
López-Tubau, J.; Laibach, N.; Burciaga-Monge, A.; Alseekh, S.; Deng, C.; Fernie, A. R.; Altabella, T.; Ferrer, A.: Differential impact of impaired steryl ester biosynthesis on the metabolome of tomato fruits and seeds. Physiologia Plantarum 177 (1), e70022 (2025)
47.
Journal Article
Nascimento, C.P.; da Fonseca-Pereira, P.; Ferreira-Silva, M.; Rosado-Souza, L.; Linka, N.; Fernie, A. R.; Araújo, W.L.; Nunes-Nesi, A.: Functional analysis of the extraplastidial TRX system in germination and early stages of development of Arabidopsis thaliana. Plant Science 350, 112310 (2025)
48.
Journal Article
Tiozon, R. J. N.; Pasion-Uy, E.; Alseekh, S.; Sartagoda, K. J. D.; Gempesaw, S.; Tolentino, J. H. G.; Fernie, A. R.; Sreenivasulu, N.: Lipidomics-based association study reveals genomic signatures of anti-cancer qualities of pigmented rice sprouts. Frontiers in Plant Science 16, 1533442 (2025)
49.
Journal Article
Wu, S.; Zhang, S.; Liu, C.-M.; Fernie, A. R.; Yan, S.: Recent Advances in Mass Spectrometry-based Protein Interactome Studies. Molecular & Cellular Proteomics 24 (1), 100887 (2025)
50.
Journal Article
Yu, Y.; Li, W.; Liu, Y.; Liu, Y.; Zhang, Q.; Ouyang, Y.; Ding, W.; Xue, Y.; Zou, Y.; Yan, J. et al.; Jia, A.; Yan, J.; Hao, X.; Gou, Y.; Zhai, Z.; Liu, L.; Zheng, Y.; Zhang, B.; Xu, J.; Yang, N.; Xiao, Y.; Zhuo, L.; Lai, Z.; Yin, P.; Liu, H.-J.; Fernie, A. R.; Jackson, D.; Yan, J.: A Zea genus-specific micropeptide controls kernel dehydration in maize. Cell 188, pp. 44 - 59 (2025)
51.
Journal Article
D'Auria, J.C.; Fernie, A. R.: The BAHD and the bold: the mitochondria's role in alkaloid artistry. Trends in Plant Science 29 (12), pp. 1290 - 1291 (2024)
52.
Journal Article
Domer, A.; Jasinska, W.; Rosental, L.; Shochat, E.; Alseekh, S.; Fernie, A. R.; Brotman, Y.; Ovadia, O.: Comparative analysis of the plasma metabolome of migrating passerines: novel insights into stopover metabolism. Journal of Avian Biology 2025 (2), e03331 (2024)
53.
Journal Article
Fontanet-Manzaneque, J. B.; Laibach, N.; Herrero-García, I.; Coleto-Alcudia, V.; Blasco-Escámez, D.; Zhang, C.; Orduña, L.; Alseekh, S.; Miller, S.; Bjarnholt, N. et al.; Fernie, A. R.; Matus, J. T.; Caño-Delgado, A. I.: Untargeted mutagenesis of brassinosteroid receptor SbBRI1 confers drought tolerance by altering phenylpropanoid metabolism in Sorghum bicolor. Plant Biotechnology Journal 22 (12), pp. 3406 - 3423 (2024)
54.
Journal Article
He, J.; Hao, Y.; He, Y.; Li, W.; Shi, Y.; Khurshid, M.; Lai, D.; Ma, C.; Wang, X.; Li, J. et al.; Cheng, J.; Fernie, A. R.; Ruan, J.; Zhang, K.; Zhou, M.: Genome-wide associated study identifies FtPMEI13 gene conferring drought resistance in Tartary buckwheat. The Plant Journal 120 (6), pp. 2398 - 2419 (2024)
55.
Journal Article
Kanojia, A.; Lyall, R.; Sujeeth, N.; Alseekh, S.; Martinez Rivas, F.J.; Fernie, A. R.; Gechev, T.S.; Petrov, V.: Physiological and molecular insights into the effect of a seaweed biostimulant on enhancing fruit yield and drought tolerance in tomato. Plant Stress 14, 100692 (2024)
56.
Journal Article
Luo, J.; He, C.; Yan, S.; Jiang, C.; Chen, A.; Li, K.; Zhu, Y.; Gui, S.; Yang, N.; Xiao, Y. et al.; Wu, S.; Zhang, F.; Liu, T.; Wang, J.; Huang, W.; Yang, Y.; Wang, H.; Yang, W.; Li, W.; Zhuo, L.; Fernie, A. R.; Zhan, J.; Wang, L.; Yan, J.: A metabolic roadmap of waxy corn flavor. Molecular Plant 17 (12), pp. 1883 - 1898 (2024)
57.
Journal Article
Mazzarella, T.; Chialva, M.; de Souza, L. P.; Wang, J.Y.; Votta, C.; Tiozon, R.; Vaccino, P.; Salvioli di Fossalunga, A.; Sreenivasulu, N.; Asami, T. et al.; Fernie, A. R.; Al-Babili, S.; Lanfranco, L.; Fiorilli, V.: Effect of exogenous treatment with zaxinone and its mimics on rice root microbiota across different growth stages. Scientific Reports 14, 31374 (2024)
58.
Journal Article
Tiozon, R. J. N.; Alseekh, S.; Fernie, A. R.; Bonto, A. P.; Yu, J.; Buenafe, R. J. Q.; Sreenivasulu, N.: Comprehensive lipidomic insights of differentially accumulating lipids in large pigmented rice sprout collection and the changes in the starch composition upon germination. Food Chemistry 460 (Part 2), 140677 (2024)
59.
Journal Article
Wijesingha Ahchige, M.; Fisher, J.; Sokolowska, E.; Lyall, R.; Illing, N.; Skirycz, A.; Zamir, D.; Alseekh, S.; Fernie, A. R.: The variegated canalized-1 tomato mutant is linked to photosystem assembly. Computational and Structural Biotechnology Journal 23, pp. 3967 - 3988 (2024)
60.
Journal Article
Farag, M.; Baky, M.; Kuehnhold, H.; Kriege, E.; Kunzmann, A.; Alseekh, S.; Al-Hammady, M.; Ezz, S.; Fernie, A. R.; Westphal, H. et al.; Stuhr, M.: Effects of thermal and UV stress on the polar and non-polar metabolome of photosymbiotic jellyfish and sea anemones. Marine Pollution Bulletin 208, 116983 (2024)
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