Publications of B. Mueller-Roeber

Dortay, H.; Mueller-Roeber, B.: A highly efficient pipeline for protein expression in Leishmania tarentolae using infrared fluorescence protein as marker. Microbial Cell Factories 9, p. 29 (2010)

Krebs, J.; Mueller-Roeber, B.; Ruzicic, S.: A novel bipartite nuclear localization signal with an atypically long linker in DOF transcription factors. Journal of Plant Physiology 167 (7), pp. 583 - 586 (2010)

Lang, D.; Weiche, B.; Timmerhaus, G.; Richardt, S.; Riano-Pachon, D. M.; Correa, L. G. G.; Reski, R.; Mueller-Roeber, B.; Rensing, S. A.: Genome-Wide Phylogenetic Comparative Analysis of Plant Transcriptional Regulation: A Timeline of Loss, Gain, Expansion, and Correlation with Complexity. Genome Biology and Evolution 2, pp. 488 - 503 (2010)

Perez-Rodriguez, P.; Riano-Pachon, D. M.; Correa, L. G. G.; Rensing, S. A.; Kersten, B.; Mueller-Roeber, B.: PInTFDB: updated content and new features of the plant transcription factor database. Nucleic Acids Research 38, pp. D822 - D827 (2010)

Riedelsberger, J.; Sharma, T.; Gonzalez, W.; Gajdanowicz, P.; Morales-Navarro, S. E.; Garcia-Mata, C.; Mueller-Roeber, B.; Gonzalez-Nilo, F. D.; Blatt, M. R.; Dreyer, I.: Distributed Structures Underlie Gating Differences between the K-in Channel KAT1 and the K-out Channel SKOR. Molecular Plant 3 (1), pp. 236 - 245 (2010)

Gajdanowicz, P.; Garcia-Mata, C.; Gonzalez, W.; Morales-Navarro, S. E.; Sharma, T.; Gonzalez-Nilo, F. D.; Gutowicz, J.; Mueller-Roeber, B.; Blatt, M. R.; Dreyer, I.: Distinct roles of the last transmembrane domain in controlling Arabidopsis K+ channel activity. New Phytologist 182 (2), pp. 380 - 391 (2009)

Riano-Pachon, D. M.; Nagel, A.; Neigenfind, J.; Wagner, R.; Basekow, R.; Weber, E.; Mueller-Roeber, B.; Diehl, S.; Kersten, B.: GabiPD: the GABI primary database-a plant integrative 'omics' database. Nucleic Acids Research 37 (Database issue), pp. 954 - 959 (2009)

Szarzynska, B.; Sobkowiak, L.; Pant, B. D.; Balazadeh, S.; Scheible, W.-R.; Mueller-Roeber, B.; Jarmolowski, A.; Szweykowska-Kulinska, Z.: Gene structures and processing of Arabidopsis thaliana HYL1-dependent pri-miRNAs. Nucleic Acids Research 37 (9), pp. 3083 - 3093 (2009)

Arvidsson, S.; Kwasniewski, M.; Riano-Pachon, D. M.; Mueller-Roeber, B.: QuantPrime - a flexible tool for reliable high-throughput primer design for quantitative PCR. BMC Bioinformatics 9, p. 465 (2008)

Balazadeh, S.; Parlitz, S.; Mueller-Roeber, B.; Meyer, R. C.: Natural developmental variations in leaf and plant senescence in Arabidopsis thaliana. Plant Biology (Stuttgart, Germany) 10 Suppl 1, pp. 136 - 147 (2008)

Correa, L. G.; Riano-Pachon, D. M.; Schrago, C. G.; dos Santos, R. V.; Mueller-Roeber, B.; Vincentz, M.: The role of bZIP transcription factors in green plant evolution: adaptive features emerging from four founder genes. PLoS One 3 (8), p. e2944 (2008)

Falkenberg, B.; Witt, I.; Zanor, M. I.; Steinhauser, D.; Mueller-Roeber, B.; Hesse, H.; Hoefgen, R.: Transcription factors relevant to auxin signalling coordinate broad-spectrum metabolic shifts including sulphur metabolism. Journal of Experimental Botany 59 (10), pp. 2831 - 2846 (2008)

Riano-Pachon, D. M.; Correa, L. G. G.; Trejos-Espinosa, R.; Mueller-Roeber, B.: Green transcription factors: A Chlamydomonas overview. Genetics 179 (1), pp. 31 - 39 (2008)

Scarpeci, T. E.; Zanor, M. I.; Carrillo, N.; Mueller-Roeber, B.; Valle, E. M.: Generation of superoxide anion in chloroplasts of Arabidopsis thaliana during active photosynthesis: a focus on rapidly induced genes. Plant Molecular Biology 66 (4), pp. 361 - 378 (2008)

Skirycz, A.; Radziejwoski, A.; Busch, W.; Hannah, M. A.; Czeszejko, J.; Kwasniewski, M.; Zanor, M. I.; Lohmann, J. U.; De Veylder, L.; Witt, I. et al.; Mueller-Roeber, B.: The DOF transcription factor OBP1 is involved in cell cycle regulation in Arabidopsis thaliana. The Plant Journal 56 (5), pp. 779 - 792 (2008)

Yang, L.; Tang, R.; Zhu, J.; Liu, H.; Mueller-Roeber, B.; Xia, H.; Zhang, H.: Enhancement of stress tolerance in transgenic tobacco plants constitutively expressing AtIpk2beta, an inositol polyphosphate 6-/3-kinase from Arabidopsis thaliana. Plant Molecular Biology 66 (4), pp. 329 - 343 (2008)

Caldana, C.; Scheible, W.-R.; Mueller-Roeber, B.; Ruzicic, S.: A quantitative RT-PCR platform for high-throughput expression profiling of 2500 rice transcription factors. Plant Methods 3, p. 7 (2007)

Gomez-Porras, J. L.; Riano-Pachon, D. M.; Dreyer, I.; Mayer, J. E.; Mueller-Roeber, B.: Genome-wide analysis of ABA-responsive elements ABRE and CE3 reveals divergent patterns in Arabidopsis and rice. BMC Genomics 8, p. 260 (2007)

Merchant, S. S.; Prochnik, S. E.; Vallon, O.; Harris, E. H.; Karpowicz, S. J.; Witman, G. B.; Terry, A.; Salamov, A.; Fritz-Laylin, L. K.; Marechal-Drouard, L. et al.; Marshall, W. F.; Qu, L. H.; Nelson, D. R.; Sanderfoot, A. A.; Spalding, M. H.; Kapitonov, V. V.; Ren, Q.; Ferris, P.; Lindquist, E.; Shapiro, H.; Lucas, S. M.; Grimwood, J.; Schmutz, J.; Cardol, P.; Cerutti, H.; Chanfreau, G.; Chen, C. L.; Cognat, V.; Croft, M. T.; Dent, R.; Dutcher, S.; Fernandez, E.; Fukuzawa, H.; Gonzalez-Ballester, D.; Gonzalez-Halphen, D.; Hallmann, A.; Hanikenne, M.; Hippler, M.; Inwood, W.; Jabbari, K.; Kalanon, M.; Kuras, R.; Lefebvre, P. A.; Lemaire, S. D.; Lobanov, A. V.; Lohr, M.; Manuell, A.; Meier, I.; Mets, L.; Mittag, M.; Mittelmeier, T.; Moroney, J. V.; Moseley, J.; Napoli, C.; Nedelcu, A. M.; Niyogi, K.; Novoselov, S. V.; Paulsen, I. T.; Pazour, G.; Purton, S.; Ral, J. P.; Riano-Pachon, D. M.; Riekhof, W.; Rymarquis, L.; Schroda, M.; Stern, D.; Umen, J.; Willows, R.; Wilson, N.; Zimmer, S. L.; Allmer, J.; Balk, J.; Bisova, K.; Chen, C. J.; Elias, M.; Gendler, K.; Hauser, C.; Lamb, M. R.; Ledford, H.; Long, J. C.; Minagawa, J.; Page, M. D.; Pan, J.; Pootakham, W.; Roje, S.; Rose, A.; Stahlberg, E.; Terauchi, A. M.; Yang, P.; Ball, S.; Bowler, C.; Dieckmann, C. L.; Gladyshev, V. N.; Green, P.; Jorgensen, R.; Mayfield, S.; Mueller-Roeber, B.; Rajamani, S.; Sayre, R. T.; Brokstein, P.,. e. a.: The Chlamydomonas genome reveals the evolution of key animal and plant functions. Science 318 (5848), pp. 245 - 250 (2007)

Riano-Pachon, D. M.; Ruzicic, S.; Dreyer, I.; Mueller-Roeber, B.: PlnTFDB: an integrative plant transcription factor database. BMC Bioinformatics 8, p. 42 (2007)